RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 HIP1O00291 1037 aa17.49■□□□□ 0.39
RTFDC1-203ENST00000395881 LMBR1LQ6UX01 489 aa17.49■□□□□ 0.39
RTFDC1-203ENST00000395881 GPR108Q9NPR9 543 aa17.49■□□□□ 0.39
RTFDC1-203ENST00000395881 CHMP5Q9NZZ3 219 aa17.49■□□□□ 0.39
RTFDC1-203ENST00000395881 SGSM2O43147 1006 aa17.49■□□□□ 0.39
RTFDC1-203ENST00000395881 PCCAP05165 728 aaPredicted RBP17.49■□□□□ 0.39
RTFDC1-203ENST00000395881 TICAM2Q86XR7 235 aa17.49■□□□□ 0.39
RTFDC1-203ENST00000395881 RUFY2Q8WXA3 655 aa17.49■□□□□ 0.39
RTFDC1-203ENST00000395881 DLEC1Q9Y238 1755 aa17.49■□□□□ 0.39
RTFDC1-203ENST00000395881 ST18O60284 1047 aa17.48■□□□□ 0.39
RTFDC1-203ENST00000395881 DDIT3P35638 169 aa17.48■□□□□ 0.39
RTFDC1-203ENST00000395881 NBPF5PQ86XG9 351 aaPredicted RBP17.48■□□□□ 0.39
RTFDC1-203ENST00000395881 CNBD1Q8NA66 436 aa17.48■□□□□ 0.39
RTFDC1-203ENST00000395881 BRIP1Q9BX63 1249 aa17.48■□□□□ 0.39
RTFDC1-203ENST00000395881 SLKQ9H2G2 1235 aaPredicted RBP17.48■□□□□ 0.39
RTFDC1-203ENST00000395881 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
RTFDC1-203ENST00000395881 FAM177BA6PVY3 158 aa17.47■□□□□ 0.39
RTFDC1-203ENST00000395881 GRIN3BO60391 1043 aa17.47■□□□□ 0.39
RTFDC1-203ENST00000395881 CIAO1O76071 339 aa17.47■□□□□ 0.39
RTFDC1-203ENST00000395881 ZNF34Q8IZ26 560 aa17.47■□□□□ 0.39
RTFDC1-203ENST00000395881 SIL1Q9H173 461 aa17.47■□□□□ 0.39
RTFDC1-203ENST00000395881 UBN2Q6ZU65 1347 aa17.46■□□□□ 0.39
RTFDC1-203ENST00000395881 GPTP24298 496 aa17.46■□□□□ 0.39
RTFDC1-203ENST00000395881 IL15P40933 162 aaPredicted RBP17.46■□□□□ 0.39
RTFDC1-203ENST00000395881 TNNI3KQ59H18 835 aa17.46■□□□□ 0.39
RTFDC1-203ENST00000395881 ZBTB38Q8NAP3 1195 aaPredicted RBP17.46■□□□□ 0.39
RTFDC1-203ENST00000395881 PIM2Q9P1W9 311 aa17.46■□□□□ 0.39
RTFDC1-203ENST00000395881 BCS1LQ9Y276 419 aa17.46■□□□□ 0.39
RTFDC1-203ENST00000395881 FPGT-TNNI3KV9GXZ4 949 aa17.46■□□□□ 0.39
RTFDC1-203ENST00000395881 RFX7Q2KHR2 1363 aa17.46■□□□□ 0.39
RTFDC1-203ENST00000395881 COL11A2P13942 1736 aaPredicted RBP17.46■□□□□ 0.39
RTFDC1-203ENST00000395881 ARFGEF1Q9Y6D6 1849 aa17.46■□□□□ 0.39
RTFDC1-203ENST00000395881 ATP5JP18859 108 aa17.45■□□□□ 0.38
RTFDC1-203ENST00000395881 MCM2P49736 904 aa17.45■□□□□ 0.38
RTFDC1-203ENST00000395881 TPTE2Q6XPS3 522 aa17.45■□□□□ 0.38
RTFDC1-203ENST00000395881 C2CD5Q86YS7 1000 aa17.45■□□□□ 0.38
RTFDC1-203ENST00000395881 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
RTFDC1-203ENST00000395881 ANO2Q9NQ90 1003 aa17.45■□□□□ 0.38
RTFDC1-203ENST00000395881 SNRKQ9NRH2 765 aa17.45■□□□□ 0.38
RTFDC1-203ENST00000395881 RAD50Q92878 1312 aa17.45■□□□□ 0.38
RTFDC1-203ENST00000395881 SUSD4Q5VX71 490 aa17.45■□□□□ 0.38
RTFDC1-203ENST00000395881 JARID2Q92833 1246 aaPredicted RBP17.45■□□□□ 0.38
RTFDC1-203ENST00000395881 NPHP1O15259 732 aa17.44■□□□□ 0.38
RTFDC1-203ENST00000395881 CD2BP2O95400 341 aaKnown RBP17.44■□□□□ 0.38
RTFDC1-203ENST00000395881 HSPA4P34932 840 aa17.44■□□□□ 0.38
RTFDC1-203ENST00000395881 PDE6BP35913 854 aa17.44■□□□□ 0.38
RTFDC1-203ENST00000395881 ST5P78524 1137 aa17.44■□□□□ 0.38
RTFDC1-203ENST00000395881 CCDC8Q9H0W5 538 aaPredicted RBP17.44■□□□□ 0.38
RTFDC1-203ENST00000395881 DIAPH3Q9NSV4 1193 aa17.44■□□□□ 0.38
RTFDC1-203ENST00000395881 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.44■□□□□ 0.38
RTFDC1-203ENST00000395881 H0YIN7 160 aa17.43■□□□□ 0.38
RTFDC1-203ENST00000395881 EYA2O00167 538 aa17.43■□□□□ 0.38
RTFDC1-203ENST00000395881 CSF1RP07333 972 aa17.43■□□□□ 0.38
RTFDC1-203ENST00000395881 TFCP2Q12800 502 aa17.43■□□□□ 0.38
RTFDC1-203ENST00000395881 KIAA1211Q6ZU35 1233 aa17.43■□□□□ 0.38
RTFDC1-203ENST00000395881 YY1P25490 414 aa17.42■□□□□ 0.38
RTFDC1-203ENST00000395881 DALRD3Q5D0E6 543 aaKnown RBP17.42■□□□□ 0.38
RTFDC1-203ENST00000395881 ATG9AQ7Z3C6 839 aa17.42■□□□□ 0.38
RTFDC1-203ENST00000395881 NLRP10Q86W26 655 aa17.42■□□□□ 0.38
RTFDC1-203ENST00000395881 DBNLQ9UJU6 430 aaKnown RBP17.42■□□□□ 0.38
RTFDC1-203ENST00000395881 MYH3P11055 1940 aa17.42■□□□□ 0.38
RTFDC1-203ENST00000395881 NTSR2O95665 410 aa17.41■□□□□ 0.38
RTFDC1-203ENST00000395881 MAP4K4O95819 1239 aaPredicted RBP17.41■□□□□ 0.38
RTFDC1-203ENST00000395881 ERFEQ4G0M1 354 aa17.41■□□□□ 0.38
RTFDC1-203ENST00000395881 NYXQ9GZU5 481 aa17.41■□□□□ 0.38
RTFDC1-203ENST00000395881 LSG1Q9H089 658 aaKnown RBP17.41■□□□□ 0.38
RTFDC1-203ENST00000395881 TLR7Q9NYK1 1049 aaKnown RBP17.41■□□□□ 0.38
RTFDC1-203ENST00000395881 TNRC6CQ9HCJ0 1690 aaKnown RBP17.41■□□□□ 0.38
RTFDC1-203ENST00000395881 ABCC12Q96J65 1359 aa17.41■□□□□ 0.38
RTFDC1-203ENST00000395881 KLRG2A4D1S0 409 aaPredicted RBP17.4■□□□□ 0.38
RTFDC1-203ENST00000395881 CCDC57Q2TAC2 916 aa17.4■□□□□ 0.38
RTFDC1-203ENST00000395881 PARP10Q53GL7 1025 aa17.4■□□□□ 0.38
RTFDC1-203ENST00000395881 CHMP3Q9Y3E7 222 aa17.4■□□□□ 0.38
RTFDC1-203ENST00000395881 SPEF2Q9C093 1822 aa17.4■□□□□ 0.38
RTFDC1-203ENST00000395881 CACNA1SQ13698 1873 aa17.4■□□□□ 0.38
RTFDC1-203ENST00000395881 HSP90AA1P07900 732 aaKnown RBP17.4■□□□□ 0.38
RTFDC1-203ENST00000395881 SRGNP10124 158 aa17.4■□□□□ 0.38
RTFDC1-203ENST00000395881 GTF2E1P29083 439 aaPredicted RBP17.4■□□□□ 0.38
RTFDC1-203ENST00000395881 TTLL6Q8N841 843 aa17.4■□□□□ 0.38
RTFDC1-203ENST00000395881 ZNF622Q969S3 477 aaKnown RBP eCLIP17.4■□□□□ 0.387e-9■□□□□ 9.4
RTFDC1-203ENST00000395881 IL25Q9H293 177 aa17.39■□□□□ 0.37
RTFDC1-203ENST00000395881 SLX4Q8IY92 1834 aa17.39■□□□□ 0.37
RTFDC1-203ENST00000395881 ZNF609O15014 1411 aa17.38■□□□□ 0.37
RTFDC1-203ENST00000395881 FRAT2O75474 233 aaPredicted RBP17.38■□□□□ 0.37
RTFDC1-203ENST00000395881 CWC27Q6UX04 472 aaKnown RBP17.38■□□□□ 0.37
RTFDC1-203ENST00000395881 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.38■□□□□ 0.37
RTFDC1-203ENST00000395881 KCNB2Q92953 911 aa17.38■□□□□ 0.37
RTFDC1-203ENST00000395881 HAUS7Q99871 368 aa17.38■□□□□ 0.37
RTFDC1-203ENST00000395881 UTP14AQ9BVJ6 771 aaKnown RBP17.38■□□□□ 0.37
RTFDC1-203ENST00000395881 CWC22Q9HCG8 908 aaKnown RBP17.38■□□□□ 0.37
RTFDC1-203ENST00000395881 IFIT5Q13325 482 aaKnown RBP17.37■□□□□ 0.37
RTFDC1-203ENST00000395881 STYK1Q6J9G0 422 aa17.37■□□□□ 0.37
RTFDC1-203ENST00000395881 ARHGAP27Q6ZUM4 889 aa17.37■□□□□ 0.37
RTFDC1-203ENST00000395881 FAM89AQ96GI7 184 aa17.37■□□□□ 0.37
RTFDC1-203ENST00000395881 BOLA2Q9H3K6 86 aa17.37■□□□□ 0.37
RTFDC1-203ENST00000395881 AKAP2Q9Y2D5 859 aa17.37■□□□□ 0.37
RTFDC1-203ENST00000395881 NEK4P51957 841 aa17.36■□□□□ 0.37
RTFDC1-203ENST00000395881 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
RTFDC1-203ENST00000395881 SPRYD3Q8NCJ5 442 aa17.36■□□□□ 0.37
RTFDC1-203ENST00000395881 MASTLQ96GX5 879 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms