RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 SLC10A5Q5PT55 438 aa20.69■□□□□ 0.9
SLC6A4-202ENST00000394821 TPTE2Q6XPS3 522 aa20.69■□□□□ 0.9
SLC6A4-202ENST00000394821 BOLA2Q9H3K6 86 aa20.69■□□□□ 0.9
SLC6A4-202ENST00000394821 CEP126Q9P2H0 1117 aa20.69■□□□□ 0.9
SLC6A4-202ENST00000394821 A0A1B0GUL7 405 aa20.68■□□□□ 0.9
SLC6A4-202ENST00000394821 REC8O95072 547 aa20.68■□□□□ 0.9
SLC6A4-202ENST00000394821 TM4SF1P30408 202 aa20.68■□□□□ 0.9
SLC6A4-202ENST00000394821 ADORA1P30542 326 aa20.68■□□□□ 0.9
SLC6A4-202ENST00000394821 DDR1Q08345 913 aa20.68■□□□□ 0.9
SLC6A4-202ENST00000394821 EDC3Q96F86 508 aaKnown RBP20.68■□□□□ 0.9
SLC6A4-202ENST00000394821 ESYT1Q9BSJ8 1104 aa20.68■□□□□ 0.9
SLC6A4-202ENST00000394821 NYXQ9GZU5 481 aa20.68■□□□□ 0.9
SLC6A4-202ENST00000394821 CARMIL3Q8ND23 1372 aa20.68■□□□□ 0.9
SLC6A4-202ENST00000394821 ZNF609O15014 1411 aa20.68■□□□□ 0.9
SLC6A4-202ENST00000394821 METTL24Q5JXM2 366 aa20.68■□□□□ 0.9
SLC6A4-202ENST00000394821 PNPLA7Q6ZV29 1317 aa20.67■□□□□ 0.9
SLC6A4-202ENST00000394821 AK9Q5TCS8 1911 aa20.67■□□□□ 0.9
SLC6A4-202ENST00000394821 GLRX3O76003 335 aaKnown RBP20.67■□□□□ 0.9
SLC6A4-202ENST00000394821 SLC51AQ86UW1 340 aa20.67■□□□□ 0.9
SLC6A4-202ENST00000394821 VGLL2Q8N8G2 317 aa20.67■□□□□ 0.9
SLC6A4-202ENST00000394821 RGPD3A6NKT7 1758 aaPredicted RBP20.67■□□□□ 0.9
SLC6A4-202ENST00000394821 RGPD4Q7Z3J3 1758 aa20.67■□□□□ 0.9
SLC6A4-202ENST00000394821 LRP5O75197 1615 aa20.67■□□□□ 0.9
SLC6A4-202ENST00000394821 SF3B3Q15393 1217 aaKnown RBP20.66■□□□□ 0.9
SLC6A4-202ENST00000394821 NPHP1O15259 732 aa20.66■□□□□ 0.9
SLC6A4-202ENST00000394821 TAF5LO75529 589 aa20.66■□□□□ 0.9
SLC6A4-202ENST00000394821 PRR5LQ6MZQ0 368 aa20.66■□□□□ 0.9
SLC6A4-202ENST00000394821 CELF1Q92879 486 aaKnown RBP20.66■□□□□ 0.9
SLC6A4-202ENST00000394821 IL25Q9H293 177 aa20.66■□□□□ 0.9
SLC6A4-202ENST00000394821 WTIPA6NIX2 430 aaPredicted RBP20.65■□□□□ 0.9
SLC6A4-202ENST00000394821 GPATCH3Q96I76 525 aa20.65■□□□□ 0.9
SLC6A4-202ENST00000394821 FBXO3Q9UK99 471 aa20.65■□□□□ 0.9
SLC6A4-202ENST00000394821 SERPINB2P05120 415 aa20.65■□□□□ 0.9
SLC6A4-202ENST00000394821 DDIT3P35638 169 aa20.65■□□□□ 0.9
SLC6A4-202ENST00000394821 MSL1Q68DK7 614 aa20.65■□□□□ 0.9
SLC6A4-202ENST00000394821 CNBD1Q8NA66 436 aa20.65■□□□□ 0.9
SLC6A4-202ENST00000394821 GPR108Q9NPR9 543 aa20.65■□□□□ 0.9
SLC6A4-202ENST00000394821 RABEP1Q15276 862 aa20.64■□□□□ 0.89
SLC6A4-202ENST00000394821 NLRP3Q96P20 1036 aa20.64■□□□□ 0.89
SLC6A4-202ENST00000394821 MPHOSPH8Q99549 860 aa20.64■□□□□ 0.89
SLC6A4-202ENST00000394821 RTL9Q8NET4 1388 aa20.64■□□□□ 0.89
SLC6A4-202ENST00000394821 POLRMTO00411 1230 aaKnown RBP20.63■□□□□ 0.89
SLC6A4-202ENST00000394821 XAGE2Q96GT9 111 aa20.63■□□□□ 0.89
SLC6A4-202ENST00000394821 PDGFDQ9GZP0 370 aaPredicted RBP20.63■□□□□ 0.89
SLC6A4-202ENST00000394821 K7ELQ4 463 aaPredicted RBP20.62■□□□□ 0.89
SLC6A4-202ENST00000394821 PDE8BO95263 885 aa20.62■□□□□ 0.89
SLC6A4-202ENST00000394821 CHGBP05060 677 aa20.62■□□□□ 0.89
SLC6A4-202ENST00000394821 HSP90B1P14625 803 aaKnown RBP20.62■□□□□ 0.89
SLC6A4-202ENST00000394821 ATP5JP18859 108 aa20.62■□□□□ 0.89
SLC6A4-202ENST00000394821 IGHMBP2P38935 993 aaKnown RBP20.62■□□□□ 0.89
SLC6A4-202ENST00000394821 ATP2B3Q16720 1220 aa20.62■□□□□ 0.89
SLC6A4-202ENST00000394821 DEKP35659 375 aaKnown RBP20.61■□□□□ 0.89
SLC6A4-202ENST00000394821 SLC15A2Q16348 729 aa20.61■□□□□ 0.89
SLC6A4-202ENST00000394821 CNTROBQ8N137 903 aa20.61■□□□□ 0.89
SLC6A4-202ENST00000394821 GOLGB1Q14789 3259 aaKnown RBP20.61■□□□□ 0.89
SLC6A4-202ENST00000394821 DNAJC2Q99543 621 aaKnown RBP20.61■□□□□ 0.89
SLC6A4-202ENST00000394821 CHMP5Q9NZZ3 219 aa20.61■□□□□ 0.89
SLC6A4-202ENST00000394821 CHRNDQ07001 517 aa20.6■□□□□ 0.89
SLC6A4-202ENST00000394821 SCARF1Q14162 830 aa20.6■□□□□ 0.89
SLC6A4-202ENST00000394821 ANKRD18AQ8IVF6 992 aa20.59■□□□□ 0.89
SLC6A4-202ENST00000394821 AKAP2Q9Y2D5 859 aa20.59■□□□□ 0.89
SLC6A4-202ENST00000394821 MROH5Q6ZUA9 1318 aa20.59■□□□□ 0.89
SLC6A4-202ENST00000394821 SF3B2Q13435 895 aaKnown RBP20.59■□□□□ 0.89
SLC6A4-202ENST00000394821 CDC5LQ99459 802 aaKnown RBP20.59■□□□□ 0.89
SLC6A4-202ENST00000394821 ANO2Q9NQ90 1003 aa20.59■□□□□ 0.89
SLC6A4-202ENST00000394821 PI16Q6UXB8 463 aa20.58■□□□□ 0.89
SLC6A4-202ENST00000394821 SNRKQ9NRH2 765 aa20.58■□□□□ 0.89
SLC6A4-202ENST00000394821 FGFR2P21802 821 aa20.58■□□□□ 0.88
SLC6A4-202ENST00000394821 BAG6P46379 1132 aa20.58■□□□□ 0.88
SLC6A4-202ENST00000394821 DDX46Q7L014 1031 aaKnown RBP20.58■□□□□ 0.88
SLC6A4-202ENST00000394821 EVI5LQ96CN4 794 aa20.58■□□□□ 0.88
SLC6A4-202ENST00000394821 SLFNL1Q499Z3 407 aa20.57■□□□□ 0.88
SLC6A4-202ENST00000394821 CWC27Q6UX04 472 aaKnown RBP20.57■□□□□ 0.88
SLC6A4-202ENST00000394821 HAUS7Q99871 368 aa20.57■□□□□ 0.88
SLC6A4-202ENST00000394821 PALD1Q9ULE6 856 aa20.57■□□□□ 0.88
SLC6A4-202ENST00000394821 A0A1B0GUL6 1792 aa20.57■□□□□ 0.88
SLC6A4-202ENST00000394821 MMP10P09238 476 aa20.56■□□□□ 0.88
SLC6A4-202ENST00000394821 RPS8P62241 208 aaKnown RBP20.56■□□□□ 0.88
SLC6A4-202ENST00000394821 GORABQ5T7V8 394 aa20.56■□□□□ 0.88
SLC6A4-202ENST00000394821 NLGN1Q8N2Q7 840 aa20.56■□□□□ 0.88
SLC6A4-202ENST00000394821 MINPP1Q9UNW1 487 aa20.56■□□□□ 0.88
SLC6A4-202ENST00000394821 FOXD4L1Q9NU39 408 aa20.56■□□□□ 0.88
SLC6A4-202ENST00000394821 BSDC1Q9NW68 430 aaPredicted RBP20.56■□□□□ 0.88
SLC6A4-202ENST00000394821 STK32BQ9NY57 414 aa20.56■□□□□ 0.88
SLC6A4-202ENST00000394821 SGSM2O43147 1006 aa20.55■□□□□ 0.88
SLC6A4-202ENST00000394821 IFIT1P09914 478 aaKnown RBP20.55■□□□□ 0.88
SLC6A4-202ENST00000394821 PHKA1P46020 1223 aa20.55■□□□□ 0.88
SLC6A4-202ENST00000394821 PUM3Q15397 648 aaKnown RBP20.55■□□□□ 0.88
SLC6A4-202ENST00000394821 FLAD1Q8NFF5 587 aa20.55■□□□□ 0.88
SLC6A4-202ENST00000394821 FAM227BQ96M60 508 aa20.55■□□□□ 0.88
SLC6A4-202ENST00000394821 GOLIM4O00461 696 aa20.55■□□□□ 0.88
SLC6A4-202ENST00000394821 HMGB2P26583 209 aaKnown RBP20.55■□□□□ 0.88
SLC6A4-202ENST00000394821 ST5P78524 1137 aa20.55■□□□□ 0.88
SLC6A4-202ENST00000394821 TTC39AQ5SRH9 613 aa20.55■□□□□ 0.88
SLC6A4-202ENST00000394821 FSD1Q9BTV5 496 aa20.55■□□□□ 0.88
SLC6A4-202ENST00000394821 ANKRD31Q8N7Z5 1873 aa20.54■□□□□ 0.88
SLC6A4-202ENST00000394821 FKBP4Q02790 459 aaKnown RBP eCLIP20.53■□□□□ 0.88
SLC6A4-202ENST00000394821 CCDC158Q5M9N0 1113 aa20.53■□□□□ 0.88
SLC6A4-202ENST00000394821 LPIN2Q92539 896 aa20.53■□□□□ 0.88
SLC6A4-202ENST00000394821 MCAMP43121 646 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms