RNA–Protein interactions for RNA: ENST00000394672.7

CCDC66-203, Transcript of coiled-coil domain containing 66, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC66, Length 3,096 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-203ENST00000394672 CCDC136Q96JN2 1154 aa9.62□□□□□ -0.87
CCDC66-203ENST00000394672 TTC41PQ6P2S7 1318 aa9.62□□□□□ -0.87
CCDC66-203ENST00000394672 HCLS1P14317 486 aaPredicted RBP9.62□□□□□ -0.87
CCDC66-203ENST00000394672 SOGA3Q5TF21 947 aa9.62□□□□□ -0.87
CCDC66-203ENST00000394672 DDX46Q7L014 1031 aaKnown RBP9.62□□□□□ -0.87
CCDC66-203ENST00000394672 C7orf43Q8WVR3 580 aa9.62□□□□□ -0.87
CCDC66-203ENST00000394672 AKAP2Q9Y2D5 859 aa9.62□□□□□ -0.87
CCDC66-203ENST00000394672 SASH1O94885 1247 aa9.61□□□□□ -0.87
CCDC66-203ENST00000394672 KCNA3P22001 575 aa9.61□□□□□ -0.87
CCDC66-203ENST00000394672 IGHMBP2P38935 993 aaKnown RBP9.61□□□□□ -0.87
CCDC66-203ENST00000394672 ANKRD18AQ8IVF6 992 aa9.61□□□□□ -0.87
CCDC66-203ENST00000394672 RHPN1Q8TCX5 695 aa9.61□□□□□ -0.87
CCDC66-203ENST00000394672 LRRCC1Q9C099 1032 aa9.61□□□□□ -0.87
CCDC66-203ENST00000394672 SPON1Q9HCB6 807 aa9.61□□□□□ -0.87
CCDC66-203ENST00000394672 MED23Q9ULK4 1368 aa9.61□□□□□ -0.87
CCDC66-203ENST00000394672 BICDL1Q6ZP65 573 aa9.61□□□□□ -0.87
CCDC66-203ENST00000394672 CHD1LQ86WJ1 897 aa9.61□□□□□ -0.87
CCDC66-203ENST00000394672 ATP6V0A2Q9Y487 856 aa9.61□□□□□ -0.87
CCDC66-203ENST00000394672 RPS8P62241 208 aaKnown RBP9.6□□□□□ -0.87
CCDC66-203ENST00000394672 G3BP1Q13283 466 aaKnown RBP eCLIP9.6□□□□□ -0.87
CCDC66-203ENST00000394672 UBE4AQ14139 1066 aa9.6□□□□□ -0.87
CCDC66-203ENST00000394672 PDGFDQ9GZP0 370 aaPredicted RBP9.6□□□□□ -0.87
CCDC66-203ENST00000394672 LEMD3Q9Y2U8 911 aa9.6□□□□□ -0.87
CCDC66-203ENST00000394672 TIAM2Q8IVF5 1701 aa9.6□□□□□ -0.87
CCDC66-203ENST00000394672 ZNF804BA4D1E1 1349 aa9.6□□□□□ -0.87
CCDC66-203ENST00000394672 RPGRQ92834 1020 aaKnown RBP9.6□□□□□ -0.87
CCDC66-203ENST00000394672 SBF1O95248 1867 aa9.6□□□□□ -0.87
CCDC66-203ENST00000394672 H0YIN7 160 aa9.59□□□□□ -0.87
CCDC66-203ENST00000394672 ARXQ96QS3 562 aa9.59□□□□□ -0.87
CCDC66-203ENST00000394672 CCDC88AQ3V6T2 1871 aa9.59□□□□□ -0.87
CCDC66-203ENST00000394672 XDHP47989 1333 aa9.59□□□□□ -0.87
CCDC66-203ENST00000394672 PPEF1O14829 653 aaPredicted RBP9.59□□□□□ -0.87
CCDC66-203ENST00000394672 MSH5O43196 834 aa9.59□□□□□ -0.87
CCDC66-203ENST00000394672 PDE8BO95263 885 aa9.59□□□□□ -0.87
CCDC66-203ENST00000394672 GTF2E1P29083 439 aaPredicted RBP9.59□□□□□ -0.87
CCDC66-203ENST00000394672 PUM3Q15397 648 aaKnown RBP9.59□□□□□ -0.87
CCDC66-203ENST00000394672 C2CD5Q86YS7 1000 aa9.59□□□□□ -0.87
CCDC66-203ENST00000394672 PSMD1Q99460 953 aa9.59□□□□□ -0.87
CCDC66-203ENST00000394672 MINPP1Q9UNW1 487 aa9.59□□□□□ -0.87
CCDC66-203ENST00000394672 FOCADQ5VW36 1801 aa9.59□□□□□ -0.87
CCDC66-203ENST00000394672 ECM29Q5VYK3 1845 aa9.58□□□□□ -0.88
CCDC66-203ENST00000394672 SEMA3EO15041 775 aa9.58□□□□□ -0.88
CCDC66-203ENST00000394672 SURF6O75683 361 aaKnown RBP9.58□□□□□ -0.88
CCDC66-203ENST00000394672 ATP2B4P23634 1241 aa9.58□□□□□ -0.88
CCDC66-203ENST00000394672 TNNI3KQ59H18 835 aa9.58□□□□□ -0.88
CCDC66-203ENST00000394672 FPGT-TNNI3KV9GXZ4 949 aa9.58□□□□□ -0.88
CCDC66-203ENST00000394672 ARID4AP29374 1257 aaPredicted RBP9.58□□□□□ -0.88
CCDC66-203ENST00000394672 MSL1Q68DK7 614 aa9.58□□□□□ -0.88
CCDC66-203ENST00000394672 LPIN2Q92539 896 aa9.58□□□□□ -0.88
CCDC66-203ENST00000394672 CELF1Q92879 486 aaKnown RBP9.58□□□□□ -0.88
CCDC66-203ENST00000394672 SEC31BQ9NQW1 1179 aa9.58□□□□□ -0.88
CCDC66-203ENST00000394672 FKBP1AP62942 108 aaKnown RBP9.57□□□□□ -0.88
CCDC66-203ENST00000394672 CHRNDQ07001 517 aa9.57□□□□□ -0.88
CCDC66-203ENST00000394672 JARID2Q92833 1246 aaPredicted RBP9.57□□□□□ -0.88
CCDC66-203ENST00000394672 SALL1Q9NSC2 1324 aa9.57□□□□□ -0.88
CCDC66-203ENST00000394672 PDE4AP27815 886 aa9.57□□□□□ -0.88
CCDC66-203ENST00000394672 LRRC24Q50LG9 513 aa9.57□□□□□ -0.88
CCDC66-203ENST00000394672 LDHAL6AQ6ZMR3 332 aa9.57□□□□□ -0.88
CCDC66-203ENST00000394672 SUPT20HQ8NEM7 779 aa9.57□□□□□ -0.88
CCDC66-203ENST00000394672 CEP126Q9P2H0 1117 aa9.57□□□□□ -0.88
CCDC66-203ENST00000394672 PA2G4Q9UQ80 394 aaKnown RBP9.57□□□□□ -0.88
CCDC66-203ENST00000394672 CLASRPQ8N2M8 674 aaKnown RBP9.56□□□□□ -0.88
CCDC66-203ENST00000394672 MPHOSPH8Q99549 860 aa9.56□□□□□ -0.88
CCDC66-203ENST00000394672 ZBTB7AO95365 584 aa9.56□□□□□ -0.88
CCDC66-203ENST00000394672 ATP5JP18859 108 aa9.56□□□□□ -0.88
CCDC66-203ENST00000394672 MMP14P50281 582 aa9.56□□□□□ -0.88
CCDC66-203ENST00000394672 TFCP2Q12800 502 aa9.56□□□□□ -0.88
CCDC66-203ENST00000394672 PLEKHM2Q8IWE5 1019 aa9.56□□□□□ -0.88
CCDC66-203ENST00000394672 PUS3Q9BZE2 481 aaKnown RBP9.56□□□□□ -0.88
CCDC66-203ENST00000394672 EXOC6BQ9Y2D4 811 aa9.56□□□□□ -0.88
CCDC66-203ENST00000394672 DDX60LQ5H9U9 1706 aaKnown RBP9.56□□□□□ -0.88
CCDC66-203ENST00000394672 SLC5A1P13866 664 aa9.55□□□□□ -0.88
CCDC66-203ENST00000394672 TAF7LQ5H9L4 462 aa9.55□□□□□ -0.88
CCDC66-203ENST00000394672 B4GALNT3Q6L9W6 998 aa9.55□□□□□ -0.88
CCDC66-203ENST00000394672 FBXO33Q7Z6M2 555 aa9.55□□□□□ -0.88
CCDC66-203ENST00000394672 RTKN2Q8IZC4 609 aa9.55□□□□□ -0.88
CCDC66-203ENST00000394672 TTLL6Q8N841 843 aa9.55□□□□□ -0.88
CCDC66-203ENST00000394672 LAMA4Q16363 1823 aa9.55□□□□□ -0.88
CCDC66-203ENST00000394672 PI4K2BQ8TCG2 481 aa9.55□□□□□ -0.88
CCDC66-203ENST00000394672 GPATCH3Q96I76 525 aa9.55□□□□□ -0.88
CCDC66-203ENST00000394672 ZNF594Q96JF6 807 aaPredicted RBP9.55□□□□□ -0.88
CCDC66-203ENST00000394672 PIM2Q9P1W9 311 aa9.55□□□□□ -0.88
CCDC66-203ENST00000394672 UQCRFS1P1P0C7P4 283 aa9.54□□□□□ -0.88
CCDC66-203ENST00000394672 IL1R1P14778 569 aa9.54□□□□□ -0.88
CCDC66-203ENST00000394672 DPEP1P16444 411 aa9.54□□□□□ -0.88
CCDC66-203ENST00000394672 METTL24Q5JXM2 366 aa9.54□□□□□ -0.88
CCDC66-203ENST00000394672 PRPF40BQ6NWY9 871 aaKnown RBP9.54□□□□□ -0.88
CCDC66-203ENST00000394672 EAF2Q96CJ1 260 aaPredicted RBP9.54□□□□□ -0.88
CCDC66-203ENST00000394672 CNNM1Q9NRU3 951 aa9.54□□□□□ -0.88
CCDC66-203ENST00000394672 ATP2B3Q16720 1220 aa9.54□□□□□ -0.88
CCDC66-203ENST00000394672 BMP2KLQ5H9B9 411 aa9.54□□□□□ -0.88
CCDC66-203ENST00000394672 FAM177BA6PVY3 158 aa9.54□□□□□ -0.88
CCDC66-203ENST00000394672 MX1P20591 662 aa9.54□□□□□ -0.88
CCDC66-203ENST00000394672 CCDC93Q567U6 631 aa9.54□□□□□ -0.88
CCDC66-203ENST00000394672 ANKRD45Q5TZF3 282 aa9.54□□□□□ -0.88
CCDC66-203ENST00000394672 CHMP3Q9Y3E7 222 aa9.54□□□□□ -0.88
CCDC66-203ENST00000394672 PSDA5PKW4 1024 aaPredicted RBP9.53□□□□□ -0.88
CCDC66-203ENST00000394672 ERC2O15083 957 aa9.53□□□□□ -0.88
CCDC66-203ENST00000394672 NPHP1O15259 732 aa9.53□□□□□ -0.88
CCDC66-203ENST00000394672 EIF5BO60841 1220 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms