RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 KAZALD1Q96I82 304 aa9.7□□□□□ -0.86
HMGB3P1-201ENST00000393368 ZNF594Q96JF6 807 aaPredicted RBP9.7□□□□□ -0.86
HMGB3P1-201ENST00000393368 CDC5LQ99459 802 aaKnown RBP9.7□□□□□ -0.86
HMGB3P1-201ENST00000393368 ANKIB1Q9P2G1 1089 aa9.7□□□□□ -0.86
HMGB3P1-201ENST00000393368 RTL9Q8NET4 1388 aa9.7□□□□□ -0.86
HMGB3P1-201ENST00000393368 LTBP1Q14766 1721 aa9.7□□□□□ -0.86
HMGB3P1-201ENST00000393368 YDJCA8MPS7 323 aa9.69□□□□□ -0.86
HMGB3P1-201ENST00000393368 POTEIP0CG38 1075 aa9.69□□□□□ -0.86
HMGB3P1-201ENST00000393368 POTEJP0CG39 1038 aa9.69□□□□□ -0.86
HMGB3P1-201ENST00000393368 KIAA2012Q0VF49 1180 aa9.69□□□□□ -0.86
HMGB3P1-201ENST00000393368 DOK7Q18PE1 504 aa9.69□□□□□ -0.86
HMGB3P1-201ENST00000393368 GRIPAP1Q4V328 841 aa9.69□□□□□ -0.86
HMGB3P1-201ENST00000393368 SUPT20HQ8NEM7 779 aa9.69□□□□□ -0.86
HMGB3P1-201ENST00000393368 FRAT1Q92837 279 aaPredicted RBP9.69□□□□□ -0.86
HMGB3P1-201ENST00000393368 SPEF2Q9C093 1822 aa9.69□□□□□ -0.86
HMGB3P1-201ENST00000393368 BICC1Q9H694 974 aaKnown RBP9.69□□□□□ -0.86
HMGB3P1-201ENST00000393368 DBNDD1Q9H9R9 158 aa9.69□□□□□ -0.86
HMGB3P1-201ENST00000393368 DICER1Q9UPY3 1922 aaKnown RBP9.69□□□□□ -0.86
HMGB3P1-201ENST00000393368 CACNA1FO60840 1977 aa9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 WDR90Q96KV7 1748 aa9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 UTYO14607 1347 aa9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 ANKRD18BA2A2Z9 1011 aa9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 SNAP23O00161 211 aa9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 RAD17O75943 681 aa9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 VEGFAP15692 232 aaPredicted RBP9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 IGHMBP2P38935 993 aaKnown RBP9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 EIF6P56537 245 aaKnown RBP9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 WASHC4Q2M389 1173 aa9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 C16orf71Q8IYS4 520 aaPredicted RBP9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 ANKRD44Q8N8A2 993 aa9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 USP44Q9H0E7 712 aa9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 KCNQ5Q9NR82 932 aa9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 GGA1Q9UJY5 639 aa9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 MINPP1Q9UNW1 487 aa9.68□□□□□ -0.86
HMGB3P1-201ENST00000393368 XDHP47989 1333 aa9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 KIF16BQ96L93 1317 aa9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 TOMM70O94826 608 aa9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 TRIM27P14373 513 aa9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 KLRK1P26718 216 aa9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 BRPF1P55201 1214 aaPredicted RBP9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 CXCL9Q07325 125 aa9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 IFIT5Q13325 482 aaKnown RBP9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 GPC2Q8N158 579 aa9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 HELBQ8NG08 1087 aaPredicted RBP9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 CLUAP1Q96AJ1 413 aa9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 MPHOSPH8Q99549 860 aa9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 API5Q9BZZ5 524 aaKnown RBP9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 BSDC1Q9NW68 430 aaPredicted RBP9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 PODXL2Q9NZ53 605 aa9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 ZNRF3Q9ULT6 936 aa9.67□□□□□ -0.86
HMGB3P1-201ENST00000393368 MYH3P11055 1940 aa9.66□□□□□ -0.86
HMGB3P1-201ENST00000393368 SHTN1A0MZ66 631 aa9.66□□□□□ -0.86
HMGB3P1-201ENST00000393368 ECE2O60344 883 aa9.66□□□□□ -0.86
HMGB3P1-201ENST00000393368 TAF5LO75529 589 aa9.66□□□□□ -0.86
HMGB3P1-201ENST00000393368 CCT4P50991 539 aaKnown RBP9.66□□□□□ -0.86
HMGB3P1-201ENST00000393368 SCNN1DP51172 638 aa9.66□□□□□ -0.86
HMGB3P1-201ENST00000393368 CHRNDQ07001 517 aa9.66□□□□□ -0.86
HMGB3P1-201ENST00000393368 CCDC57Q2TAC2 916 aa9.66□□□□□ -0.86
HMGB3P1-201ENST00000393368 TAF7LQ5H9L4 462 aa9.66□□□□□ -0.86
HMGB3P1-201ENST00000393368 KLHDC4Q8TBB5 520 aa9.66□□□□□ -0.86
HMGB3P1-201ENST00000393368 L3MBTL3Q96JM7 780 aaPredicted RBP9.66□□□□□ -0.86
HMGB3P1-201ENST00000393368 EYA3Q99504 573 aa9.66□□□□□ -0.86
HMGB3P1-201ENST00000393368 MEIS3Q99687 375 aa9.66□□□□□ -0.86
HMGB3P1-201ENST00000393368 PUS3Q9BZE2 481 aaKnown RBP9.66□□□□□ -0.86
HMGB3P1-201ENST00000393368 PLIN1O60240 522 aa9.65□□□□□ -0.86
HMGB3P1-201ENST00000393368 ATP2B4P23634 1241 aa9.65□□□□□ -0.86
HMGB3P1-201ENST00000393368 EPS15P42566 896 aa9.65□□□□□ -0.86
HMGB3P1-201ENST00000393368 GMPSP49915 693 aaPredicted RBP9.65□□□□□ -0.86
HMGB3P1-201ENST00000393368 RABL6Q3YEC7 729 aaPredicted RBP9.65□□□□□ -0.86
HMGB3P1-201ENST00000393368 EAPPQ56P03 285 aaPredicted RBP9.65□□□□□ -0.86
HMGB3P1-201ENST00000393368 CIAPIN1Q6FI81 312 aa9.65□□□□□ -0.86
HMGB3P1-201ENST00000393368 TXNRD3Q86VQ6 643 aa9.65□□□□□ -0.86
HMGB3P1-201ENST00000393368 RBM46Q8TBY0 533 aaKnown RBP9.65□□□□□ -0.86
HMGB3P1-201ENST00000393368 YTHDC1Q96MU7 727 aaKnown RBP9.65□□□□□ -0.86
HMGB3P1-201ENST00000393368 ZC3H12CQ9C0D7 883 aaKnown RBP9.65□□□□□ -0.86
HMGB3P1-201ENST00000393368 TAF1DQ9H5J8 278 aaPredicted RBP9.65□□□□□ -0.86
HMGB3P1-201ENST00000393368 HACL1Q9UJ83 578 aa9.65□□□□□ -0.86
HMGB3P1-201ENST00000393368 ZBTB12Q9Y330 459 aaPredicted RBP9.65□□□□□ -0.86
HMGB3P1-201ENST00000393368 IQCA1LA6NCM1 817 aa9.64□□□□□ -0.87
HMGB3P1-201ENST00000393368 PSMD14O00487 310 aa9.64□□□□□ -0.87
HMGB3P1-201ENST00000393368 UBTFL1P0CB47 393 aaPredicted RBP9.64□□□□□ -0.87
HMGB3P1-201ENST00000393368 EPHX2P34913 555 aa9.64□□□□□ -0.87
HMGB3P1-201ENST00000393368 HTRA3P83110 453 aa9.64□□□□□ -0.87
HMGB3P1-201ENST00000393368 ATF7IPQ6VMQ6 1270 aa9.64□□□□□ -0.87
HMGB3P1-201ENST00000393368 LDHAL6AQ6ZMR3 332 aa9.64□□□□□ -0.87
HMGB3P1-201ENST00000393368 TMEM57Q8N5G2 664 aa9.64□□□□□ -0.87
HMGB3P1-201ENST00000393368 ARHGAP45Q92619 1136 aa9.64□□□□□ -0.87
HMGB3P1-201ENST00000393368 VPS33BQ9H267 617 aa9.64□□□□□ -0.87
HMGB3P1-201ENST00000393368 CNNM1Q9NRU3 951 aa9.64□□□□□ -0.87
HMGB3P1-201ENST00000393368 LRRFIP2Q9Y608 721 aaKnown RBP9.64□□□□□ -0.87
HMGB3P1-201ENST00000393368 MED23Q9ULK4 1368 aa9.63□□□□□ -0.87
HMGB3P1-201ENST00000393368 CEP350Q5VT06 3117 aa9.63□□□□□ -0.87
HMGB3P1-201ENST00000393368 ZNF804BA4D1E1 1349 aa9.63□□□□□ -0.87
HMGB3P1-201ENST00000393368 G3V3G9 751 aa9.63□□□□□ -0.87
HMGB3P1-201ENST00000393368 KCNJ4P48050 445 aa9.63□□□□□ -0.87
HMGB3P1-201ENST00000393368 LRRC24Q50LG9 513 aa9.63□□□□□ -0.87
HMGB3P1-201ENST00000393368 DCAF8Q5TAQ9 597 aa9.63□□□□□ -0.87
HMGB3P1-201ENST00000393368 ZKSCAN2Q63HK3 967 aa9.63□□□□□ -0.87
HMGB3P1-201ENST00000393368 INTS3Q68E01 1043 aaKnown RBP9.63□□□□□ -0.87
HMGB3P1-201ENST00000393368 SMC1BQ8NDV3 1235 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms