RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 CARD10Q9BWT7 1032 aa14.6□□□□□ -0.07
RFC5-201ENST00000392542 CCDC9Q9Y3X0 531 aaKnown RBP14.6□□□□□ -0.07
RFC5-201ENST00000392542 SOS2Q07890 1332 aaPredicted RBP14.59□□□□□ -0.07
RFC5-201ENST00000392542 GOLIM4O00461 696 aa14.59□□□□□ -0.07
RFC5-201ENST00000392542 PTMAP06454 111 aaKnown RBP14.59□□□□□ -0.07
RFC5-201ENST00000392542 TPM2P07951 284 aa14.59□□□□□ -0.07
RFC5-201ENST00000392542 ATG3Q9NT62 314 aa14.59□□□□□ -0.07
RFC5-201ENST00000392542 CIAO1O76071 339 aa14.58□□□□□ -0.07
RFC5-201ENST00000392542 TIMM10P62072 90 aa14.58□□□□□ -0.07
RFC5-201ENST00000392542 LRRC24Q50LG9 513 aa14.58□□□□□ -0.07
RFC5-201ENST00000392542 DSCC1Q9BVC3 393 aa14.58□□□□□ -0.07
RFC5-201ENST00000392542 USP25Q9UHP3 1055 aa14.58□□□□□ -0.07
RFC5-201ENST00000392542 HSP90B1P14625 803 aaKnown RBP14.58□□□□□ -0.08
RFC5-201ENST00000392542 ZMYM1Q5SVZ6 1142 aa14.58□□□□□ -0.08
RFC5-201ENST00000392542 FAM173BQ6P4H8 233 aa14.58□□□□□ -0.08
RFC5-201ENST00000392542 SCAND2PQ9GZW5 306 aaPredicted RBP14.58□□□□□ -0.08
RFC5-201ENST00000392542 JAK2O60674 1132 aa14.57□□□□□ -0.08
RFC5-201ENST00000392542 HMGB1P09429 215 aaKnown RBP14.57□□□□□ -0.08
RFC5-201ENST00000392542 STOX1Q6ZVD7 989 aa14.57□□□□□ -0.08
RFC5-201ENST00000392542 ZNF594Q96JF6 807 aaPredicted RBP14.57□□□□□ -0.08
RFC5-201ENST00000392542 ISCA1Q9BUE6 129 aa14.57□□□□□ -0.08
RFC5-201ENST00000392542 TOGARAM1Q9Y4F4 1720 aa14.57□□□□□ -0.08
RFC5-201ENST00000392542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.57□□□□□ -0.08
RFC5-201ENST00000392542 A0A1B0GUL7 405 aa14.56□□□□□ -0.08
RFC5-201ENST00000392542 IFIT1P09914 478 aaKnown RBP14.56□□□□□ -0.08
RFC5-201ENST00000392542 HSPA2P54652 639 aa14.56□□□□□ -0.08
RFC5-201ENST00000392542 ADCY5O95622 1261 aa14.56□□□□□ -0.08
RFC5-201ENST00000392542 TERF1P54274 439 aa14.56□□□□□ -0.08
RFC5-201ENST00000392542 DHX32Q7L7V1 743 aaKnown RBP14.56□□□□□ -0.08
RFC5-201ENST00000392542 BRF1Q92994 677 aa14.56□□□□□ -0.08
RFC5-201ENST00000392542 SPATA32Q96LK8 384 aa14.56□□□□□ -0.08
RFC5-201ENST00000392542 PFKFB2O60825 505 aa14.55□□□□□ -0.08
RFC5-201ENST00000392542 KDM4AO75164 1064 aa14.55□□□□□ -0.08
RFC5-201ENST00000392542 LIG1P18858 919 aa14.55□□□□□ -0.08
RFC5-201ENST00000392542 RESTQ13127 1097 aa14.55□□□□□ -0.08
RFC5-201ENST00000392542 SLFNL1Q499Z3 407 aa14.55□□□□□ -0.08
RFC5-201ENST00000392542 SMARCC2Q8TAQ2 1214 aa14.55□□□□□ -0.08
RFC5-201ENST00000392542 LEO1Q8WVC0 666 aaPredicted RBP14.55□□□□□ -0.08
RFC5-201ENST00000392542 PUS3Q9BZE2 481 aaKnown RBP14.55□□□□□ -0.08
RFC5-201ENST00000392542 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.55□□□□□ -0.082e-6■■□□□ 11.7
RFC5-201ENST00000392542 RNF113AO15541 343 aaKnown RBP14.55□□□□□ -0.08
RFC5-201ENST00000392542 CCDC192P0DO97 292 aa14.55□□□□□ -0.08
RFC5-201ENST00000392542 SCRN1Q12765 414 aa14.55□□□□□ -0.08
RFC5-201ENST00000392542 TCIRG1Q13488 830 aa14.55□□□□□ -0.08
RFC5-201ENST00000392542 LLPHQ9BRT6 129 aaKnown RBP14.55□□□□□ -0.08
RFC5-201ENST00000392542 LRRC2Q9BYS8 371 aa14.55□□□□□ -0.08
RFC5-201ENST00000392542 NUP62CLQ9H1M0 184 aa14.55□□□□□ -0.08
RFC5-201ENST00000392542 MAST3O60307 1309 aa14.55□□□□□ -0.08
RFC5-201ENST00000392542 FGD1P98174 961 aa14.54□□□□□ -0.08
RFC5-201ENST00000392542 CEP126Q9P2H0 1117 aa14.54□□□□□ -0.08
RFC5-201ENST00000392542 TFIP11Q9UBB9 837 aaKnown RBP14.54□□□□□ -0.08
RFC5-201ENST00000392542 FBXO3Q9UK99 471 aa14.54□□□□□ -0.08
RFC5-201ENST00000392542 HSPD1P10809 573 aaKnown RBP14.54□□□□□ -0.08
RFC5-201ENST00000392542 EXOSC10Q01780 885 aaKnown RBP14.54□□□□□ -0.08
RFC5-201ENST00000392542 MAP3K11Q16584 847 aa14.54□□□□□ -0.08
RFC5-201ENST00000392542 AGXT2Q9BYV1 514 aa14.54□□□□□ -0.08
RFC5-201ENST00000392542 STRN4Q9NRL3 753 aa14.54□□□□□ -0.08
RFC5-201ENST00000392542 GOLGA6L4A6NEF3 574 aa14.53□□□□□ -0.08
RFC5-201ENST00000392542 H3BQV1 296 aa14.53□□□□□ -0.08
RFC5-201ENST00000392542 TRIM28Q13263 835 aaKnown RBP14.53□□□□□ -0.08
RFC5-201ENST00000392542 CCDC57Q2TAC2 916 aa14.53□□□□□ -0.08
RFC5-201ENST00000392542 IFFO2Q5TF58 517 aa14.53□□□□□ -0.08
RFC5-201ENST00000392542 ZSCAN16Q9H4T2 348 aaPredicted RBP14.53□□□□□ -0.08
RFC5-201ENST00000392542 TMOD3Q9NYL9 352 aa14.53□□□□□ -0.08
RFC5-201ENST00000392542 SLAIN2Q9P270 581 aa14.53□□□□□ -0.08
RFC5-201ENST00000392542 MYH15Q9Y2K3 1946 aa14.53□□□□□ -0.08
RFC5-201ENST00000392542 E7EWF7 191 aa14.53□□□□□ -0.08
RFC5-201ENST00000392542 KIAA2012Q0VF49 1180 aa14.53□□□□□ -0.08
RFC5-201ENST00000392542 DDX11Q96FC9 970 aa14.53□□□□□ -0.08
RFC5-201ENST00000392542 DDX19AQ9NUU7 478 aaKnown RBP14.53□□□□□ -0.08
RFC5-201ENST00000392542 M0R2C6 588 aa14.52□□□□□ -0.08
RFC5-201ENST00000392542 NSUN7Q8NE18 718 aaKnown RBP14.52□□□□□ -0.08
RFC5-201ENST00000392542 PLA2G12BQ9BX93 195 aa14.52□□□□□ -0.08
RFC5-201ENST00000392542 AKAP2Q9Y2D5 859 aa14.52□□□□□ -0.08
RFC5-201ENST00000392542 R3HCC1Q9Y3T6 440 aaKnown RBP14.52□□□□□ -0.08
RFC5-201ENST00000392542 PCCAP05165 728 aaPredicted RBP14.52□□□□□ -0.09
RFC5-201ENST00000392542 EVA1CP58658 441 aa14.52□□□□□ -0.09
RFC5-201ENST00000392542 APOBRQ0VD83 1088 aa14.52□□□□□ -0.09
RFC5-201ENST00000392542 CCDC158Q5M9N0 1113 aa14.52□□□□□ -0.09
RFC5-201ENST00000392542 TEX13AQ9BXU3 409 aaPredicted RBP14.52□□□□□ -0.09
RFC5-201ENST00000392542 DACT1Q9NYF0 836 aa14.52□□□□□ -0.09
RFC5-201ENST00000392542 HMGN5P82970 282 aaKnown RBP14.51□□□□□ -0.09
RFC5-201ENST00000392542 LRRFIP1Q32MZ4 808 aaKnown RBP14.51□□□□□ -0.09
RFC5-201ENST00000392542 TTC39AQ5SRH9 613 aa14.51□□□□□ -0.09
RFC5-201ENST00000392542 KIF6Q6ZMV9 814 aa14.51□□□□□ -0.09
RFC5-201ENST00000392542 FAM200AQ8TCP9 573 aa14.51□□□□□ -0.09
RFC5-201ENST00000392542 A0A0G2JLW4 131 aa14.51□□□□□ -0.09
RFC5-201ENST00000392542 CTDNEP1O95476 244 aa14.51□□□□□ -0.09
RFC5-201ENST00000392542 TYRO3Q06418 890 aa14.51□□□□□ -0.09
RFC5-201ENST00000392542 NAA16Q6N069 864 aaPredicted RBP14.51□□□□□ -0.09
RFC5-201ENST00000392542 RBM43Q6ZSC3 357 aaKnown RBP14.51□□□□□ -0.09
RFC5-201ENST00000392542 VSIG10Q8N0Z9 540 aa14.51□□□□□ -0.09
RFC5-201ENST00000392542 XAGE2Q96GT9 111 aa14.51□□□□□ -0.09
RFC5-201ENST00000392542 PGBD1Q96JS3 809 aa14.51□□□□□ -0.09
RFC5-201ENST00000392542 TNMDQ9H2S6 317 aa14.51□□□□□ -0.09
RFC5-201ENST00000392542 CLSTN2Q9H4D0 955 aa14.51□□□□□ -0.09
RFC5-201ENST00000392542 MRVI1Q9Y6F6 885 aa14.51□□□□□ -0.09
RFC5-201ENST00000392542 PTPDC1A2A3K4 754 aa14.5□□□□□ -0.09
RFC5-201ENST00000392542 AP5Z1O43299 807 aa14.5□□□□□ -0.09
RFC5-201ENST00000392542 ADORA1P30542 326 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms