RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 HTTP42858 3142 aa15.54■□□□□ 0.08
SOD1-202ENST00000389995 TCIRG1Q13488 830 aa15.54■□□□□ 0.08
SOD1-202ENST00000389995 KIF4BQ2VIQ3 1234 aa15.54■□□□□ 0.08
SOD1-202ENST00000389995 RTL5Q5HYW3 569 aaPredicted RBP15.54■□□□□ 0.08
SOD1-202ENST00000389995 MOB2Q70IA6 237 aa15.54■□□□□ 0.08
SOD1-202ENST00000389995 HPS5Q9UPZ3 1129 aa15.54■□□□□ 0.08
SOD1-202ENST00000389995 KRT24Q2M2I5 525 aa15.53■□□□□ 0.08
SOD1-202ENST00000389995 RASAL3Q86YV0 1011 aa15.53■□□□□ 0.08
SOD1-202ENST00000389995 FAM89AQ96GI7 184 aa15.53■□□□□ 0.08
SOD1-202ENST00000389995 HSP90AB3PQ58FF7 597 aa15.52■□□□□ 0.08
SOD1-202ENST00000389995 SULF1Q8IWU6 871 aa15.52■□□□□ 0.08
SOD1-202ENST00000389995 SPEF2Q9C093 1822 aa15.52■□□□□ 0.07
SOD1-202ENST00000389995 ATP5J2-PTCD1G3V325 749 aa15.51■□□□□ 0.07
SOD1-202ENST00000389995 TBC1D8O95759 1140 aa15.51■□□□□ 0.07
SOD1-202ENST00000389995 RPS12P25398 132 aaKnown RBP15.51■□□□□ 0.07
SOD1-202ENST00000389995 ANGEL2Q5VTE6 544 aaKnown RBP15.51■□□□□ 0.07
SOD1-202ENST00000389995 TBC1D16Q8TBP0 767 aa15.51■□□□□ 0.07
SOD1-202ENST00000389995 PAPPA2Q9BXP8 1791 aa15.51■□□□□ 0.07
SOD1-202ENST00000389995 BRCA2P51587 3418 aa15.5■□□□□ 0.07
SOD1-202ENST00000389995 MAPK8IP3Q9UPT6 1336 aa15.5■□□□□ 0.07
SOD1-202ENST00000389995 SCARF1Q14162 830 aa15.5■□□□□ 0.07
SOD1-202ENST00000389995 TMC4Q7Z404 712 aa15.5■□□□□ 0.07
SOD1-202ENST00000389995 VIL1P09327 827 aaKnown RBP15.49■□□□□ 0.07
SOD1-202ENST00000389995 PRAMEF18Q5VWM3 479 aa15.49■□□□□ 0.07
SOD1-202ENST00000389995 ZNF296Q8WUU4 475 aaPredicted RBP15.49■□□□□ 0.07
SOD1-202ENST00000389995 CHPF2Q9P2E5 772 aa15.49■□□□□ 0.07
SOD1-202ENST00000389995 HDAC9Q9UKV0 1011 aa15.49■□□□□ 0.07
SOD1-202ENST00000389995 ZNF646O15015 1829 aaPredicted RBP15.48■□□□□ 0.07
SOD1-202ENST00000389995 UBE2Q2LH0YL09 131 aa15.48■□□□□ 0.07
SOD1-202ENST00000389995 RIPK4P57078 832 aa15.48■□□□□ 0.07
SOD1-202ENST00000389995 MKRN3Q13064 507 aaKnown RBP15.48■□□□□ 0.07
SOD1-202ENST00000389995 SF3B3Q15393 1217 aaKnown RBP15.48■□□□□ 0.07
SOD1-202ENST00000389995 EYA3Q99504 573 aa15.48■□□□□ 0.07
SOD1-202ENST00000389995 KIAA0100Q14667 2235 aaKnown RBP15.47■□□□□ 0.07
SOD1-202ENST00000389995 ZC3H12CQ9C0D7 883 aaKnown RBP15.47■□□□□ 0.07
SOD1-202ENST00000389995 SEC31BQ9NQW1 1179 aa15.47■□□□□ 0.07
SOD1-202ENST00000389995 G3V3G9 751 aa15.46■□□□□ 0.07
SOD1-202ENST00000389995 UFL1O94874 794 aa15.46■□□□□ 0.07
SOD1-202ENST00000389995 RPS8P62241 208 aaKnown RBP15.46■□□□□ 0.07
SOD1-202ENST00000389995 DCAF8Q5TAQ9 597 aa15.46■□□□□ 0.07
SOD1-202ENST00000389995 ISCA1Q9BUE6 129 aa15.46■□□□□ 0.07
SOD1-202ENST00000389995 ZNF280AP59817 542 aaPredicted RBP15.45■□□□□ 0.06
SOD1-202ENST00000389995 R3HDMLQ9H3Y0 253 aa15.45■□□□□ 0.06
SOD1-202ENST00000389995 LAS1LQ9Y4W2 734 aaKnown RBP15.45■□□□□ 0.06
SOD1-202ENST00000389995 WTIPA6NIX2 430 aaPredicted RBP15.44■□□□□ 0.06
SOD1-202ENST00000389995 IRS4O14654 1257 aaPredicted RBP15.44■□□□□ 0.06
SOD1-202ENST00000389995 RSBN1LQ6PCB5 846 aaPredicted RBP15.44■□□□□ 0.06
SOD1-202ENST00000389995 ANKRD13DQ6ZTN6 518 aa15.44■□□□□ 0.06
SOD1-202ENST00000389995 PLBD2Q8NHP8 589 aa15.44■□□□□ 0.06
SOD1-202ENST00000389995 JARID2Q92833 1246 aaPredicted RBP15.44■□□□□ 0.06
SOD1-202ENST00000389995 CCDC85AQ96PX6 553 aaPredicted RBP15.44■□□□□ 0.06
SOD1-202ENST00000389995 MYOZ2Q9NPC6 264 aa15.44■□□□□ 0.06
SOD1-202ENST00000389995 ANKIB1Q9P2G1 1089 aa15.44■□□□□ 0.06
SOD1-202ENST00000389995 TTLL12Q14166 644 aaPredicted RBP15.43■□□□□ 0.06
SOD1-202ENST00000389995 NEUROD2Q15784 382 aa15.43■□□□□ 0.06
SOD1-202ENST00000389995 PKN2Q16513 984 aaKnown RBP15.43■□□□□ 0.06
SOD1-202ENST00000389995 PPP4R3CPQ6ZMV5 832 aa15.43■□□□□ 0.06
SOD1-202ENST00000389995 REM2Q8IYK8 340 aaPredicted RBP15.43■□□□□ 0.06
SOD1-202ENST00000389995 MXD3Q9BW11 206 aa15.43■□□□□ 0.06
SOD1-202ENST00000389995 CEP290O15078 2479 aa15.43■□□□□ 0.06
SOD1-202ENST00000389995 MYH3P11055 1940 aa15.43■□□□□ 0.06
SOD1-202ENST00000389995 GPR25O00155 361 aa15.42■□□□□ 0.06
SOD1-202ENST00000389995 USP17L8P0C7I0 530 aa15.42■□□□□ 0.06
SOD1-202ENST00000389995 TMPOP42166 694 aaKnown RBP15.42■□□□□ 0.06
SOD1-202ENST00000389995 NBPF9Q3BBW0 867 aa15.42■□□□□ 0.06
SOD1-202ENST00000389995 AGBL3Q8NEM8 1001 aa15.42■□□□□ 0.06
SOD1-202ENST00000389995 GMLQ99445 158 aa15.42■□□□□ 0.06
SOD1-202ENST00000389995 PODXL2Q9NZ53 605 aa15.42■□□□□ 0.06
SOD1-202ENST00000389995 GGA1Q9UJY5 639 aa15.42■□□□□ 0.06
SOD1-202ENST00000389995 FKBP1BP68106 108 aa15.41■□□□□ 0.06
SOD1-202ENST00000389995 PRKG1Q13976 671 aa15.41■□□□□ 0.06
SOD1-202ENST00000389995 HDGFL1Q5TGJ6 251 aa15.41■□□□□ 0.06
SOD1-202ENST00000389995 PNNQ9H307 717 aaKnown RBP15.41■□□□□ 0.06
SOD1-202ENST00000389995 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.41■□□□□ 0.06
SOD1-202ENST00000389995 TM4SF4P48230 202 aa15.4■□□□□ 0.06
SOD1-202ENST00000389995 FBXO46Q6PJ61 603 aaPredicted RBP15.4■□□□□ 0.06
SOD1-202ENST00000389995 CCDC146Q8IYE0 955 aa15.4■□□□□ 0.06
SOD1-202ENST00000389995 BABAM1Q9NWV8 329 aa15.4■□□□□ 0.06
SOD1-202ENST00000389995 FZD1Q9UP38 647 aa15.4■□□□□ 0.06
SOD1-202ENST00000389995 CHL1O00533 1208 aa15.39■□□□□ 0.05
SOD1-202ENST00000389995 NCBP3Q53F19 620 aaKnown RBP15.39■□□□□ 0.05
SOD1-202ENST00000389995 ZNF609O15014 1411 aa15.39■□□□□ 0.05
SOD1-202ENST00000389995 SZT2Q5T011 3432 aa15.39■□□□□ 0.05
SOD1-202ENST00000389995 PITPNM2Q9BZ72 1349 aa15.39■□□□□ 0.05
SOD1-202ENST00000389995 RBBP6Q7Z6E9 1792 aaKnown RBP15.39■□□□□ 0.05
SOD1-202ENST00000389995 POTEFA5A3E0 1075 aa15.38■□□□□ 0.05
SOD1-202ENST00000389995 USP17L3A6NCW0 530 aa15.38■□□□□ 0.05
SOD1-202ENST00000389995 USP17L4A6NCW7 530 aa15.38■□□□□ 0.05
SOD1-202ENST00000389995 PTPN12Q05209 780 aaKnown RBP15.38■□□□□ 0.05
SOD1-202ENST00000389995 USP17L1Q7RTZ2 530 aa15.38■□□□□ 0.05
SOD1-202ENST00000389995 FBXW7Q969H0 707 aa15.38■□□□□ 0.05
SOD1-202ENST00000389995 FKTNO75072 461 aa15.37■□□□□ 0.05
SOD1-202ENST00000389995 SASH1O94885 1247 aa15.37■□□□□ 0.05
SOD1-202ENST00000389995 HABP4Q5JVS0 413 aaKnown RBP15.37■□□□□ 0.05
SOD1-202ENST00000389995 ZBTB38Q8NAP3 1195 aaPredicted RBP15.37■□□□□ 0.05
SOD1-202ENST00000389995 DBF4Q9UBU7 674 aaPredicted RBP15.37■□□□□ 0.05
SOD1-202ENST00000389995 ECM29Q5VYK3 1845 aa15.36■□□□□ 0.05
SOD1-202ENST00000389995 LMOD3Q0VAK6 560 aa15.36■□□□□ 0.05
SOD1-202ENST00000389995 TRIM28Q13263 835 aaKnown RBP15.36■□□□□ 0.05
SOD1-202ENST00000389995 RIC3Q7Z5B4 369 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms