RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 IL6STP40189 918 aaPredicted RBP10.6□□□□□ -0.71
GPNMB-202ENST00000381990 TFCP2Q12800 502 aa10.6□□□□□ -0.71
GPNMB-202ENST00000381990 TTC14Q96N46 770 aa10.6□□□□□ -0.71
GPNMB-202ENST00000381990 TLR7Q9NYK1 1049 aaKnown RBP10.6□□□□□ -0.71
GPNMB-202ENST00000381990 CNPY2Q9Y2B0 182 aa10.6□□□□□ -0.71
GPNMB-202ENST00000381990 ZBTB1Q9Y2K1 713 aa10.6□□□□□ -0.71
GPNMB-202ENST00000381990 CHMP3Q9Y3E7 222 aa10.6□□□□□ -0.71
GPNMB-202ENST00000381990 SYT1P21579 422 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 TNNI3KQ59H18 835 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 PPP4R3BQ5MIZ7 849 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 RUFY2Q8WXA3 655 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 NGLY1Q96IV0 654 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 BCL2L12Q9HB09 334 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 FPGT-TNNI3KV9GXZ4 949 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 CTIFO43310 598 aaKnown RBP10.59□□□□□ -0.71
GPNMB-202ENST00000381990 CCDC192P0DO97 292 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 SYCP1Q15431 976 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 VPS72Q15906 364 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 PDCL2Q8N4E4 241 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 ANKRD7Q92527 254 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 FEZ1Q99689 392 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 ARID3AQ99856 593 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 PLA2G12BQ9BX93 195 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 SMC3Q9UQE7 1217 aa10.59□□□□□ -0.71
GPNMB-202ENST00000381990 ANKRD36CQ5JPF3 1778 aa10.58□□□□□ -0.72
GPNMB-202ENST00000381990 ERVV-1B6SEH8 477 aa10.58□□□□□ -0.72
GPNMB-202ENST00000381990 FOXD4L6Q3SYB3 417 aaPredicted RBP10.58□□□□□ -0.72
GPNMB-202ENST00000381990 FOXD4L3Q6VB84 417 aaPredicted RBP10.58□□□□□ -0.72
GPNMB-202ENST00000381990 ZBTB38Q8NAP3 1195 aaPredicted RBP10.58□□□□□ -0.72
GPNMB-202ENST00000381990 ACSBG1Q96GR2 724 aa10.58□□□□□ -0.72
GPNMB-202ENST00000381990 C8orf37Q96NL8 207 aa10.58□□□□□ -0.72
GPNMB-202ENST00000381990 IL25Q9H293 177 aa10.58□□□□□ -0.72
GPNMB-202ENST00000381990 BCL9LQ86UU0 1499 aa10.58□□□□□ -0.72
GPNMB-202ENST00000381990 CICQ96RK0 1608 aaPredicted RBP10.58□□□□□ -0.72
GPNMB-202ENST00000381990 HIP1O00291 1037 aa10.58□□□□□ -0.72
GPNMB-202ENST00000381990 HLFQ16534 295 aa10.58□□□□□ -0.72
GPNMB-202ENST00000381990 GPR108Q9NPR9 543 aa10.58□□□□□ -0.72
GPNMB-202ENST00000381990 DBNLQ9UJU6 430 aaKnown RBP10.58□□□□□ -0.72
GPNMB-202ENST00000381990 A0A0G2JS52 829 aa10.57□□□□□ -0.72
GPNMB-202ENST00000381990 ATP5JP18859 108 aa10.57□□□□□ -0.72
GPNMB-202ENST00000381990 IL15P40933 162 aaPredicted RBP10.57□□□□□ -0.72
GPNMB-202ENST00000381990 CWC27Q6UX04 472 aaKnown RBP10.57□□□□□ -0.72
GPNMB-202ENST00000381990 ATG9AQ7Z3C6 839 aa10.57□□□□□ -0.72
GPNMB-202ENST00000381990 NLRP10Q86W26 655 aa10.57□□□□□ -0.72
GPNMB-202ENST00000381990 PRDM10Q9NQV6 1147 aa10.57□□□□□ -0.72
GPNMB-202ENST00000381990 SH2B1Q9NRF2 756 aaPredicted RBP10.57□□□□□ -0.72
GPNMB-202ENST00000381990 CDHR2Q9BYE9 1310 aa10.57□□□□□ -0.72
GPNMB-202ENST00000381990 NUP98P52948 1817 aa10.57□□□□□ -0.72
GPNMB-202ENST00000381990 LOC102724428A0A0B4J2F2 783 aa10.57□□□□□ -0.72
GPNMB-202ENST00000381990 EYA2O00167 538 aa10.57□□□□□ -0.72
GPNMB-202ENST00000381990 CIAO1O76071 339 aa10.57□□□□□ -0.72
GPNMB-202ENST00000381990 SIK1P57059 783 aa10.57□□□□□ -0.72
GPNMB-202ENST00000381990 FAM98CQ17RN3 349 aaKnown RBP10.57□□□□□ -0.72
GPNMB-202ENST00000381990 DZIP3Q86Y13 1208 aaKnown RBP10.57□□□□□ -0.72
GPNMB-202ENST00000381990 FNBP4Q8N3X1 1017 aaPredicted RBP10.57□□□□□ -0.72
GPNMB-202ENST00000381990 SMARCC1Q92922 1105 aaPredicted RBP10.57□□□□□ -0.72
GPNMB-202ENST00000381990 ZSCAN31Q96LW9 406 aaPredicted RBP10.57□□□□□ -0.72
GPNMB-202ENST00000381990 CCDC87Q9NVE4 849 aa10.57□□□□□ -0.72
GPNMB-202ENST00000381990 SNX14Q9Y5W7 946 aa10.57□□□□□ -0.72
GPNMB-202ENST00000381990 SPATA31A6Q5VVP1 1343 aa10.57□□□□□ -0.72
GPNMB-202ENST00000381990 ATP6V1AP38606 617 aa10.56□□□□□ -0.72
GPNMB-202ENST00000381990 AK2P54819 239 aa10.56□□□□□ -0.72
GPNMB-202ENST00000381990 FAM89AQ96GI7 184 aa10.56□□□□□ -0.72
GPNMB-202ENST00000381990 LSG1Q9H089 658 aaKnown RBP10.56□□□□□ -0.72
GPNMB-202ENST00000381990 BOLA2Q9H3K6 86 aa10.56□□□□□ -0.72
GPNMB-202ENST00000381990 FBXO3Q9UK99 471 aa10.56□□□□□ -0.72
GPNMB-202ENST00000381990 CCDC171Q6TFL3 1326 aa10.56□□□□□ -0.72
GPNMB-202ENST00000381990 RREB1Q92766 1687 aa10.56□□□□□ -0.72
GPNMB-202ENST00000381990 FIBPO43427 364 aa10.56□□□□□ -0.72
GPNMB-202ENST00000381990 GPTP24298 496 aa10.56□□□□□ -0.72
GPNMB-202ENST00000381990 EIF5P55010 431 aaKnown RBP10.56□□□□□ -0.72
GPNMB-202ENST00000381990 CCDC57Q2TAC2 916 aa10.56□□□□□ -0.72
GPNMB-202ENST00000381990 INTS5Q6P9B9 1019 aaKnown RBP10.56□□□□□ -0.72
GPNMB-202ENST00000381990 FAM200AQ8TCP9 573 aa10.56□□□□□ -0.72
GPNMB-202ENST00000381990 KCNF1Q9H3M0 494 aa10.56□□□□□ -0.72
GPNMB-202ENST00000381990 PALLDQ8WX93 1383 aa10.56□□□□□ -0.72
GPNMB-202ENST00000381990 RIOK3O14730 519 aaKnown RBP10.55□□□□□ -0.72
GPNMB-202ENST00000381990 CSF1RP07333 972 aa10.55□□□□□ -0.72
GPNMB-202ENST00000381990 CRKLP46109 303 aaKnown RBP10.55□□□□□ -0.72
GPNMB-202ENST00000381990 CBX1P83916 185 aa10.55□□□□□ -0.72
GPNMB-202ENST00000381990 VPS53Q5VIR6 699 aa10.55□□□□□ -0.72
GPNMB-202ENST00000381990 RUFY3Q7L099 469 aa10.55□□□□□ -0.72
GPNMB-202ENST00000381990 ELP1O95163 1332 aa10.55□□□□□ -0.72
GPNMB-202ENST00000381990 GIMAP6Q6P9H5 292 aa10.55□□□□□ -0.72
GPNMB-202ENST00000381990 C17orf53Q8N3J3 647 aaPredicted RBP10.55□□□□□ -0.72
GPNMB-202ENST00000381990 DBNDD2Q9BQY9 259 aa10.55□□□□□ -0.72
GPNMB-202ENST00000381990 TM6SF1Q9BZW5 370 aa10.55□□□□□ -0.72
GPNMB-202ENST00000381990 TBC1D2BQ9UPU7 963 aa10.55□□□□□ -0.72
GPNMB-202ENST00000381990 TSC1Q92574 1164 aa10.54□□□□□ -0.72
GPNMB-202ENST00000381990 ZNF594Q96JF6 807 aaPredicted RBP10.54□□□□□ -0.72
GPNMB-202ENST00000381990 FSD1Q9BTV5 496 aa10.54□□□□□ -0.72
GPNMB-202ENST00000381990 ZHX1Q9UKY1 873 aaPredicted RBP10.54□□□□□ -0.72
GPNMB-202ENST00000381990 PLCB2Q00722 1185 aa10.54□□□□□ -0.72
GPNMB-202ENST00000381990 ITPK1Q13572 414 aa10.54□□□□□ -0.72
GPNMB-202ENST00000381990 ATP2B3Q16720 1220 aa10.54□□□□□ -0.72
GPNMB-202ENST00000381990 LRRC24Q50LG9 513 aa10.54□□□□□ -0.72
GPNMB-202ENST00000381990 TAF3Q5VWG9 929 aa10.54□□□□□ -0.72
GPNMB-202ENST00000381990 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.54□□□□□ -0.72
GPNMB-202ENST00000381990 ZNF34Q8IZ26 560 aa10.54□□□□□ -0.72
GPNMB-202ENST00000381990 MPNDQ8N594 471 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms