RNA–Protein interactions for RNA: ENST00000380692.6

MSL3-205, Transcript of MSL complex subunit 3, human

TSL 3

Gene MSL3, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSL3-205	ENST00000380692	REM2	Q8IYK8	340 aa	Predicted RBP	11.41	□□□□□ -0.58
MSL3-205	ENST00000380692	MPND	Q8N594	471 aa		11.41	□□□□□ -0.58
MSL3-205	ENST00000380692	TAOK3	Q9H2K8	898 aa		11.41	□□□□□ -0.58
MSL3-205	ENST00000380692	C1orf115	Q9H7X2	142 aa		11.41	□□□□□ -0.58
MSL3-205	ENST00000380692	ANKIB1	Q9P2G1	1089 aa		11.41	□□□□□ -0.58
MSL3-205	ENST00000380692	MINPP1	Q9UNW1	487 aa		11.41	□□□□□ -0.58
MSL3-205	ENST00000380692	SRGAP3	O43295	1099 aa		11.4	□□□□□ -0.58
MSL3-205	ENST00000380692	GPSM2	P81274	684 aa		11.4	□□□□□ -0.58
MSL3-205	ENST00000380692	ATP8B2	P98198	1209 aa		11.4	□□□□□ -0.58
MSL3-205	ENST00000380692	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
MSL3-205	ENST00000380692	SLC51A	Q86UW1	340 aa		11.4	□□□□□ -0.58
MSL3-205	ENST00000380692	CNNM1	Q9NRU3	951 aa		11.4	□□□□□ -0.58
MSL3-205	ENST00000380692	ZBTB40	Q9NUA8	1239 aa		11.4	□□□□□ -0.58
MSL3-205	ENST00000380692	DDX60	Q8IY21	1712 aa	Known RBP	11.4	□□□□□ -0.58
MSL3-205	ENST00000380692	C6orf229	H3BNL8	230 aa		11.39	□□□□□ -0.59
MSL3-205	ENST00000380692	NFKBIE	O00221	500 aa		11.39	□□□□□ -0.59
MSL3-205	ENST00000380692	COL11A2	P13942	1736 aa	Predicted RBP	11.39	□□□□□ -0.59
MSL3-205	ENST00000380692	RASSF7	Q02833	373 aa		11.39	□□□□□ -0.59
MSL3-205	ENST00000380692	MTX1	Q13505	466 aa		11.39	□□□□□ -0.59
MSL3-205	ENST00000380692	SUPT20H	Q8NEM7	779 aa		11.39	□□□□□ -0.59
MSL3-205	ENST00000380692	KLHDC4	Q8TBB5	520 aa		11.39	□□□□□ -0.59
MSL3-205	ENST00000380692	SP7	Q8TDD2	431 aa	Predicted RBP	11.39	□□□□□ -0.59
MSL3-205	ENST00000380692	PSMD1	Q99460	953 aa		11.39	□□□□□ -0.59
MSL3-205	ENST00000380692	ANKRD2	Q9GZV1	360 aa		11.39	□□□□□ -0.59
MSL3-205	ENST00000380692	LTBP3	Q9NS15	1303 aa		11.38	□□□□□ -0.59
MSL3-205	ENST00000380692	SLX4	Q8IY92	1834 aa		11.38	□□□□□ -0.59
MSL3-205	ENST00000380692	LMNB1	P20700	586 aa		11.38	□□□□□ -0.59
MSL3-205	ENST00000380692	RFX5	P48382	616 aa	Predicted RBP	11.38	□□□□□ -0.59
MSL3-205	ENST00000380692	PTPN12	Q05209	780 aa	Known RBP	11.38	□□□□□ -0.59
MSL3-205	ENST00000380692	CHRND	Q07001	517 aa		11.38	□□□□□ -0.59
MSL3-205	ENST00000380692	CRBN	Q96SW2	442 aa		11.38	□□□□□ -0.59
MSL3-205	ENST00000380692	PUS3	Q9BZE2	481 aa	Known RBP	11.38	□□□□□ -0.59
MSL3-205	ENST00000380692	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.38	□□□□□ -0.59
MSL3-205	ENST00000380692	PODXL2	Q9NZ53	605 aa		11.38	□□□□□ -0.59
MSL3-205	ENST00000380692	XDH	P47989	1333 aa		11.37	□□□□□ -0.59
MSL3-205	ENST00000380692	PNMA6E	A0A0J9YXQ4	647 aa		11.37	□□□□□ -0.59
MSL3-205	ENST00000380692	CENPB	P07199	599 aa	Predicted RBP	11.37	□□□□□ -0.59
MSL3-205	ENST00000380692	ATP2B4	P23634	1241 aa		11.37	□□□□□ -0.59
MSL3-205	ENST00000380692	WASHC4	Q2M389	1173 aa		11.37	□□□□□ -0.59
MSL3-205	ENST00000380692	LRRC24	Q50LG9	513 aa		11.37	□□□□□ -0.59
MSL3-205	ENST00000380692	C9orf131	Q5VYM1	1079 aa		11.37	□□□□□ -0.59
MSL3-205	ENST00000380692	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.37	□□□□□ -0.59
MSL3-205	ENST00000380692	HELB	Q8NG08	1087 aa	Predicted RBP	11.37	□□□□□ -0.59
MSL3-205	ENST00000380692	TBC1D16	Q8TBP0	767 aa		11.37	□□□□□ -0.59
MSL3-205	ENST00000380692	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.37	□□□□□ -0.59
MSL3-205	ENST00000380692	RNF181	Q9P0P0	153 aa		11.37	□□□□□ -0.59
MSL3-205	ENST00000380692	POLL	Q9UGP5	575 aa		11.37	□□□□□ -0.59
MSL3-205	ENST00000380692	GGA1	Q9UJY5	639 aa		11.37	□□□□□ -0.59
MSL3-205	ENST00000380692	RIPOR2	Q9Y4F9	1068 aa		11.37	□□□□□ -0.59
MSL3-205	ENST00000380692	DLEC1	Q9Y238	1755 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	EYA2	O00167	538 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	TAF5L	O75529	589 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	UFL1	O94874	794 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	IARS	P41252	1262 aa	Known RBP	11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	KCNJ4	P48050	445 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	PRELP	P51888	382 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	METTL24	Q5JXM2	366 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	CEP85	Q6P2H3	762 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	LARGE2	Q8N3Y3	721 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	EYA3	Q99504	573 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	SIL1	Q9H173	461 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	VPS33B	Q9H267	617 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	COPRS	Q9NQ92	184 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	FBXO3	Q9UK99	471 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	PA2G4	Q9UQ80	394 aa	Known RBP	11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	LEMD3	Q9Y2U8	911 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	LAMB2	P55268	1798 aa		11.36	□□□□□ -0.59
MSL3-205	ENST00000380692	MROH5	Q6ZUA9	1318 aa		11.35	□□□□□ -0.59
MSL3-205	ENST00000380692	WTIP	A6NIX2	430 aa	Predicted RBP	11.35	□□□□□ -0.59
MSL3-205	ENST00000380692		G3V3G9	751 aa		11.35	□□□□□ -0.59
MSL3-205	ENST00000380692	RIMBP2	O15034	1052 aa		11.35	□□□□□ -0.59
MSL3-205	ENST00000380692	PPIP5K2	O43314	1243 aa		11.35	□□□□□ -0.59
MSL3-205	ENST00000380692	SURF6	O75683	361 aa	Known RBP	11.35	□□□□□ -0.59
MSL3-205	ENST00000380692	CIAO1	O76071	339 aa		11.35	□□□□□ -0.59
MSL3-205	ENST00000380692	IL15	P40933	162 aa	Predicted RBP	11.35	□□□□□ -0.59
MSL3-205	ENST00000380692	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
MSL3-205	ENST00000380692	AOC3	Q16853	763 aa		11.35	□□□□□ -0.59
MSL3-205	ENST00000380692	DCAF8	Q5TAQ9	597 aa		11.35	□□□□□ -0.59
MSL3-205	ENST00000380692	SSH3	Q8TE77	659 aa		11.35	□□□□□ -0.59
MSL3-205	ENST00000380692	JDP2	Q8WYK2	163 aa		11.35	□□□□□ -0.59
MSL3-205	ENST00000380692	BRCA1	P38398	1863 aa	Known RBP	11.35	□□□□□ -0.59
MSL3-205	ENST00000380692	ZNF804B	A4D1E1	1349 aa		11.35	□□□□□ -0.59
MSL3-205	ENST00000380692	COL4A1	P02462	1669 aa		11.34	□□□□□ -0.59
MSL3-205	ENST00000380692	HMMR	O75330	724 aa		11.34	□□□□□ -0.59
MSL3-205	ENST00000380692	PDE8B	O95263	885 aa		11.34	□□□□□ -0.59
MSL3-205	ENST00000380692	IRX6	P78412	446 aa	Predicted RBP	11.34	□□□□□ -0.59
MSL3-205	ENST00000380692	KIAA2012	Q0VF49	1180 aa		11.34	□□□□□ -0.59
MSL3-205	ENST00000380692	ATG9A	Q7Z3C6	839 aa		11.34	□□□□□ -0.59
MSL3-205	ENST00000380692	GPR101	Q96P66	508 aa	Predicted RBP	11.34	□□□□□ -0.59
MSL3-205	ENST00000380692	CEP126	Q9P2H0	1117 aa		11.34	□□□□□ -0.59
MSL3-205	ENST00000380692	SNED1	Q8TER0	1413 aa		11.34	□□□□□ -0.59
MSL3-205	ENST00000380692	SNAP23	O00161	211 aa		11.33	□□□□□ -0.6
MSL3-205	ENST00000380692	OS9	Q13438	667 aa	Predicted RBP	11.33	□□□□□ -0.6
MSL3-205	ENST00000380692	AAMP	Q13685	434 aa		11.33	□□□□□ -0.6
MSL3-205	ENST00000380692	SIRT2	Q8IXJ6	389 aa		11.33	□□□□□ -0.6
MSL3-205	ENST00000380692	NIM1K	Q8IY84	436 aa		11.33	□□□□□ -0.6
MSL3-205	ENST00000380692	EXOC6	Q8TAG9	804 aa		11.33	□□□□□ -0.6
MSL3-205	ENST00000380692	TAF1	P21675	1872 aa		11.33	□□□□□ -0.6
MSL3-205	ENST00000380692	ARFGEF1	Q9Y6D6	1849 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms