RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 SEC31BQ9NQW1 1179 aa29.88■■■□□ 2.37
U2AF1-202ENST00000380276 IFT57Q9NWB7 429 aa29.88■■■□□ 2.37
U2AF1-202ENST00000380276 ANKIB1Q9P2G1 1089 aa29.88■■■□□ 2.37
U2AF1-202ENST00000380276 HSP90B1P14625 803 aaKnown RBP29.87■■■□□ 2.37
U2AF1-202ENST00000380276 DLK2Q6UY11 383 aa29.87■■■□□ 2.37
U2AF1-202ENST00000380276 HHIPL1Q96JK4 782 aa29.87■■■□□ 2.37
U2AF1-202ENST00000380276 CCDC85AQ96PX6 553 aaPredicted RBP29.87■■■□□ 2.37
U2AF1-202ENST00000380276 KCNQ5Q9NR82 932 aa29.87■■■□□ 2.37
U2AF1-202ENST00000380276 UFL1O94874 794 aa29.86■■■□□ 2.37
U2AF1-202ENST00000380276 HUNKP57058 714 aa29.86■■■□□ 2.37
U2AF1-202ENST00000380276 KRT26Q7Z3Y9 468 aa29.86■■■□□ 2.37
U2AF1-202ENST00000380276 JARID2Q92833 1246 aaPredicted RBP29.86■■■□□ 2.37
U2AF1-202ENST00000380276 PRKRIP1Q9H875 184 aaPredicted RBP29.86■■■□□ 2.37
U2AF1-202ENST00000380276 ZNF853P0CG23 659 aa29.85■■■□□ 2.37
U2AF1-202ENST00000380276 RPS12P25398 132 aaKnown RBP29.85■■■□□ 2.37
U2AF1-202ENST00000380276 DCPSQ96C86 337 aaKnown RBP29.85■■■□□ 2.37
U2AF1-202ENST00000380276 CCDC85CA6NKD9 419 aa29.84■■■□□ 2.37
U2AF1-202ENST00000380276 EGFRP00533 1210 aa29.84■■■□□ 2.37
U2AF1-202ENST00000380276 CCDC152Q4G0S7 254 aa29.84■■■□□ 2.37
U2AF1-202ENST00000380276 RTL9Q8NET4 1388 aa29.84■■■□□ 2.37
U2AF1-202ENST00000380276 BRPF1P55201 1214 aaPredicted RBP29.83■■■□□ 2.37
U2AF1-202ENST00000380276 CWC25Q9NXE8 425 aaPredicted RBP29.83■■■□□ 2.37
U2AF1-202ENST00000380276 GGA1Q9UJY5 639 aa29.83■■■□□ 2.37
U2AF1-202ENST00000380276 ADM5C9JUS6 153 aa29.82■■■□□ 2.36
U2AF1-202ENST00000380276 CA12O43570 354 aa29.82■■■□□ 2.36
U2AF1-202ENST00000380276 DDX58O95786 925 aaKnown RBP29.82■■■□□ 2.36
U2AF1-202ENST00000380276 KIF4BQ2VIQ3 1234 aa29.82■■■□□ 2.36
U2AF1-202ENST00000380276 CCDC191Q8NCU4 936 aa29.82■■■□□ 2.36
U2AF1-202ENST00000380276 PDE8AO60658 829 aa29.81■■■□□ 2.36
U2AF1-202ENST00000380276 PCCAP05165 728 aaPredicted RBP29.81■■■□□ 2.36
U2AF1-202ENST00000380276 NOGQ13253 232 aa29.8■■■□□ 2.36
U2AF1-202ENST00000380276 C2orf69Q8N8R5 385 aa29.8■■■□□ 2.36
U2AF1-202ENST00000380276 C8orf58Q8NAV2 365 aa29.8■■■□□ 2.36
U2AF1-202ENST00000380276 GBA2Q9HCG7 927 aaPredicted RBP29.8■■■□□ 2.36
U2AF1-202ENST00000380276 CCDC30Q5VVM6 783 aa29.79■■■□□ 2.36
U2AF1-202ENST00000380276 ANKRD18AQ8IVF6 992 aa29.79■■■□□ 2.36
U2AF1-202ENST00000380276 PODXL2Q9NZ53 605 aa29.79■■■□□ 2.36
U2AF1-202ENST00000380276 METTL22Q9BUU2 404 aaPredicted RBP29.78■■■□□ 2.36
U2AF1-202ENST00000380276 GGA3Q9NZ52 723 aa29.78■■■□□ 2.36
U2AF1-202ENST00000380276 SULF1Q8IWU6 871 aa29.77■■■□□ 2.36
U2AF1-202ENST00000380276 ZIC5Q96T25 663 aa29.77■■■□□ 2.36
U2AF1-202ENST00000380276 SCN9AQ15858 1988 aa29.76■■■□□ 2.35
U2AF1-202ENST00000380276 VIL1P09327 827 aaKnown RBP29.76■■■□□ 2.35
U2AF1-202ENST00000380276 RGMBQ6NW40 437 aa29.76■■■□□ 2.35
U2AF1-202ENST00000380276 CHMP4AQ9BY43 222 aa29.76■■■□□ 2.35
U2AF1-202ENST00000380276 MAP3K2Q9Y2U5 619 aa29.76■■■□□ 2.35
U2AF1-202ENST00000380276 POLR2AP24928 1970 aaKnown RBP29.75■■■□□ 2.35
U2AF1-202ENST00000380276 FAM161AQ3B820 660 aa29.75■■■□□ 2.35
U2AF1-202ENST00000380276 ASTN2O75129 1339 aaPredicted RBP29.73■■■□□ 2.35
U2AF1-202ENST00000380276 XDHP47989 1333 aa29.73■■■□□ 2.35
U2AF1-202ENST00000380276 ZNF157P51786 506 aaPredicted RBP29.73■■■□□ 2.35
U2AF1-202ENST00000380276 RSBN1LQ6PCB5 846 aaPredicted RBP29.73■■■□□ 2.35
U2AF1-202ENST00000380276 TSPYL6Q8N831 410 aa29.72■■■□□ 2.35
U2AF1-202ENST00000380276 CDC5LQ99459 802 aaKnown RBP29.72■■■□□ 2.35
U2AF1-202ENST00000380276 MCOLN1Q9GZU1 580 aa29.72■■■□□ 2.35
U2AF1-202ENST00000380276 CASP8AP2Q9UKL3 1982 aa29.72■■■□□ 2.35
U2AF1-202ENST00000380276 ATP2B4P23634 1241 aa29.71■■■□□ 2.35
U2AF1-202ENST00000380276 CTSWP56202 376 aa29.71■■■□□ 2.35
U2AF1-202ENST00000380276 NEXNQ0ZGT2 675 aa29.71■■■□□ 2.35
U2AF1-202ENST00000380276 DGKZQ13574 1117 aa29.71■■■□□ 2.35
U2AF1-202ENST00000380276 TSR2Q969E8 191 aaKnown RBP29.71■■■□□ 2.35
U2AF1-202ENST00000380276 STK31Q9BXU1 1019 aa29.71■■■□□ 2.35
U2AF1-202ENST00000380276 ANGEL2Q5VTE6 544 aaKnown RBP29.7■■■□□ 2.35
U2AF1-202ENST00000380276 AGBL3Q8NEM8 1001 aa29.7■■■□□ 2.35
U2AF1-202ENST00000380276 CCDC102AQ96A19 550 aa29.7■■■□□ 2.35
U2AF1-202ENST00000380276 CDCA5Q96FF9 252 aa29.7■■■□□ 2.35
U2AF1-202ENST00000380276 PI4KAP2A4QPH2 592 aa29.69■■■□□ 2.34
U2AF1-202ENST00000380276 KIF23Q02241 960 aaPredicted RBP29.69■■■□□ 2.34
U2AF1-202ENST00000380276 SCARF1Q14162 830 aa29.69■■■□□ 2.34
U2AF1-202ENST00000380276 KSR2Q6VAB6 950 aa29.69■■■□□ 2.34
U2AF1-202ENST00000380276 PI4KAP1Q8N8J0 262 aa29.69■■■□□ 2.34
U2AF1-202ENST00000380276 FBXW7Q969H0 707 aa29.69■■■□□ 2.34
U2AF1-202ENST00000380276 SPEF2Q9C093 1822 aa29.68■■■□□ 2.34
U2AF1-202ENST00000380276 FAM155AB1AL88 458 aaPredicted RBP29.68■■■□□ 2.34
U2AF1-202ENST00000380276 USP17L3A6NCW0 530 aa29.67■■■□□ 2.34
U2AF1-202ENST00000380276 USP17L4A6NCW7 530 aa29.67■■■□□ 2.34
U2AF1-202ENST00000380276 USP17L1Q7RTZ2 530 aa29.67■■■□□ 2.34
U2AF1-202ENST00000380276 IGKV5-2P06315 115 aa29.66■■■□□ 2.34
U2AF1-202ENST00000380276 USP17L8P0C7I0 530 aa29.66■■■□□ 2.34
U2AF1-202ENST00000380276 ZNF280AP59817 542 aaPredicted RBP29.66■■■□□ 2.34
U2AF1-202ENST00000380276 MYOZ2Q9NPC6 264 aa29.66■■■□□ 2.34
U2AF1-202ENST00000380276 CWF19L2Q2TBE0 894 aaKnown RBP29.65■■■□□ 2.34
U2AF1-202ENST00000380276 GREM2Q9H772 168 aa29.65■■■□□ 2.34
U2AF1-202ENST00000380276 PSME4Q14997 1843 aa29.65■■■□□ 2.34
U2AF1-202ENST00000380276 MLLT1Q03111 559 aaPredicted RBP29.64■■■□□ 2.34
U2AF1-202ENST00000380276 PODNQ7Z5L7 613 aa29.64■■■□□ 2.34
U2AF1-202ENST00000380276 TTLL11Q8NHH1 800 aa29.64■■■□□ 2.34
U2AF1-202ENST00000380276 SCAF8Q9UPN6 1271 aaKnown RBP29.63■■■□□ 2.33
U2AF1-202ENST00000380276 MYH3P11055 1940 aa29.63■■■□□ 2.33
U2AF1-202ENST00000380276 ZNF609O15014 1411 aa29.62■■■□□ 2.33
U2AF1-202ENST00000380276 WTIPA6NIX2 430 aaPredicted RBP29.62■■■□□ 2.33
U2AF1-202ENST00000380276 TRPA1O75762 1119 aa29.62■■■□□ 2.33
U2AF1-202ENST00000380276 SLC10A3P09131 477 aa29.62■■■□□ 2.33
U2AF1-202ENST00000380276 TWISTNBQ3B726 338 aaPredicted RBP29.62■■■□□ 2.33
U2AF1-202ENST00000380276 UBE3BQ7Z3V4 1068 aa29.62■■■□□ 2.33
U2AF1-202ENST00000380276 BSDC1Q9NW68 430 aaPredicted RBP29.62■■■□□ 2.33
U2AF1-202ENST00000380276 MINPP1Q9UNW1 487 aa29.62■■■□□ 2.33
U2AF1-202ENST00000380276 MED23Q9ULK4 1368 aa29.62■■■□□ 2.33
U2AF1-202ENST00000380276 NEURL1BA8MQ27 555 aa29.61■■■□□ 2.33
U2AF1-202ENST00000380276 SLC4A2P04920 1241 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms