RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 SEC31BQ9NQW1 1179 aa17.31■□□□□ 0.36
UPK1A-202ENST00000379013 ZBTB40Q9NUA8 1239 aa17.31■□□□□ 0.36
UPK1A-202ENST00000379013 AOC3Q16853 763 aa17.3■□□□□ 0.36
UPK1A-202ENST00000379013 DDX46Q7L014 1031 aaKnown RBP17.3■□□□□ 0.36
UPK1A-202ENST00000379013 PDE8AO60658 829 aa17.29■□□□□ 0.36
UPK1A-202ENST00000379013 HMMRO75330 724 aa17.29■□□□□ 0.36
UPK1A-202ENST00000379013 LARGE2Q8N3Y3 721 aa17.29■□□□□ 0.36
UPK1A-202ENST00000379013 PLA2G12BQ9BX93 195 aa17.29■□□□□ 0.36
UPK1A-202ENST00000379013 NBPF7P0C2Y1 421 aaPredicted RBP17.28■□□□□ 0.36
UPK1A-202ENST00000379013 IRX6P78412 446 aaPredicted RBP17.28■□□□□ 0.36
UPK1A-202ENST00000379013 MPNDQ8N594 471 aa17.28■□□□□ 0.36
UPK1A-202ENST00000379013 RPAP2Q8IXW5 612 aaPredicted RBP17.27■□□□□ 0.36
UPK1A-202ENST00000379013 EXOC6Q8TAG9 804 aa17.27■□□□□ 0.36
UPK1A-202ENST00000379013 CCDC85AQ96PX6 553 aaPredicted RBP17.27■□□□□ 0.36
UPK1A-202ENST00000379013 LRRFIP2Q9Y608 721 aaKnown RBP17.27■□□□□ 0.36
UPK1A-202ENST00000379013 GJA3Q9Y6H8 435 aa17.27■□□□□ 0.36
UPK1A-202ENST00000379013 WTIPA6NIX2 430 aaPredicted RBP17.26■□□□□ 0.35
UPK1A-202ENST00000379013 PPIP5K2O43314 1243 aa17.26■□□□□ 0.35
UPK1A-202ENST00000379013 EPS15P42566 896 aa17.26■□□□□ 0.35
UPK1A-202ENST00000379013 CASP7P55210 303 aa17.26■□□□□ 0.35
UPK1A-202ENST00000379013 GPSM2P81274 684 aa17.26■□□□□ 0.35
UPK1A-202ENST00000379013 CXCL9Q07325 125 aa17.26■□□□□ 0.35
UPK1A-202ENST00000379013 CCDC152Q4G0S7 254 aa17.26■□□□□ 0.35
UPK1A-202ENST00000379013 GRIPAP1Q4V328 841 aa17.26■□□□□ 0.35
UPK1A-202ENST00000379013 CHADLQ6NUI6 762 aa17.26■□□□□ 0.35
UPK1A-202ENST00000379013 DPP8Q6V1X1 898 aaPredicted RBP17.26■□□□□ 0.35
UPK1A-202ENST00000379013 GPC2Q8N158 579 aa17.26■□□□□ 0.35
UPK1A-202ENST00000379013 JDP2Q8WYK2 163 aa17.26■□□□□ 0.35
UPK1A-202ENST00000379013 GPR101Q96P66 508 aaPredicted RBP17.26■□□□□ 0.35
UPK1A-202ENST00000379013 POLLQ9UGP5 575 aa17.26■□□□□ 0.35
UPK1A-202ENST00000379013 YDJCA8MPS7 323 aa17.25■□□□□ 0.35
UPK1A-202ENST00000379013 ITGBL1O95965 494 aaPredicted RBP17.25■□□□□ 0.35
UPK1A-202ENST00000379013 EPHX2P34913 555 aa17.25■□□□□ 0.35
UPK1A-202ENST00000379013 SCNN1DP51172 638 aa17.25■□□□□ 0.35
UPK1A-202ENST00000379013 RPS8P62241 208 aaKnown RBP17.25■□□□□ 0.35
UPK1A-202ENST00000379013 KCNQ5Q9NR82 932 aa17.25■□□□□ 0.35
UPK1A-202ENST00000379013 HACL1Q9UJ83 578 aa17.25■□□□□ 0.35
UPK1A-202ENST00000379013 CTSWP56202 376 aa17.24■□□□□ 0.35
UPK1A-202ENST00000379013 MTX1Q13505 466 aa17.24■□□□□ 0.35
UPK1A-202ENST00000379013 SUCLG2Q96I99 432 aa17.24■□□□□ 0.35
UPK1A-202ENST00000379013 RTL9Q8NET4 1388 aa17.24■□□□□ 0.35
UPK1A-202ENST00000379013 EIF6P56537 245 aaKnown RBP17.23■□□□□ 0.35
UPK1A-202ENST00000379013 FMR1Q06787 632 aaKnown RBP eCLIP17.23■□□□□ 0.35
UPK1A-202ENST00000379013 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
UPK1A-202ENST00000379013 CCDC57Q2TAC2 916 aa17.23■□□□□ 0.35
UPK1A-202ENST00000379013 RABL6Q3YEC7 729 aaPredicted RBP17.23■□□□□ 0.35
UPK1A-202ENST00000379013 EAPPQ56P03 285 aaPredicted RBP17.23■□□□□ 0.35
UPK1A-202ENST00000379013 KLRG1Q96E93 195 aa17.23■□□□□ 0.35
UPK1A-202ENST00000379013 BICC1Q9H694 974 aaKnown RBP17.23■□□□□ 0.35
UPK1A-202ENST00000379013 LTBP1Q14766 1721 aa17.23■□□□□ 0.35
UPK1A-202ENST00000379013 DUOX1Q9NRD9 1551 aa17.23■□□□□ 0.35
UPK1A-202ENST00000379013 SHTN1A0MZ66 631 aa17.22■□□□□ 0.35
UPK1A-202ENST00000379013 IQCA1LA6NCM1 817 aa17.22■□□□□ 0.35
UPK1A-202ENST00000379013 RAD17O75943 681 aa17.22■□□□□ 0.35
UPK1A-202ENST00000379013 LDHDQ86WU2 507 aa17.22■□□□□ 0.35
UPK1A-202ENST00000379013 NIM1KQ8IY84 436 aa17.22■□□□□ 0.35
UPK1A-202ENST00000379013 RWDD1Q9H446 243 aaPredicted RBP17.22■□□□□ 0.35
UPK1A-202ENST00000379013 ZNRF3Q9ULT6 936 aa17.22■□□□□ 0.35
UPK1A-202ENST00000379013 NSFL1CQ9UNZ2 370 aaKnown RBP17.22■□□□□ 0.35
UPK1A-202ENST00000379013 CHMP3Q9Y3E7 222 aa17.22■□□□□ 0.35
UPK1A-202ENST00000379013 PASKQ96RG2 1323 aa17.21■□□□□ 0.35
UPK1A-202ENST00000379013 SRGAP3O43295 1099 aa17.21■□□□□ 0.35
UPK1A-202ENST00000379013 IFIT5Q13325 482 aaKnown RBP17.21■□□□□ 0.35
UPK1A-202ENST00000379013 TAF7LQ5H9L4 462 aa17.21■□□□□ 0.35
UPK1A-202ENST00000379013 MAP1SQ66K74 1059 aaPredicted RBP17.21■□□□□ 0.35
UPK1A-202ENST00000379013 CEP85Q6P2H3 762 aa17.21■□□□□ 0.35
UPK1A-202ENST00000379013 LMBR1LQ6UX01 489 aa17.21■□□□□ 0.35
UPK1A-202ENST00000379013 ANKRD44Q8N8A2 993 aa17.21■□□□□ 0.35
UPK1A-202ENST00000379013 TTLL11Q8NHH1 800 aa17.21■□□□□ 0.35
UPK1A-202ENST00000379013 CDC5LQ99459 802 aaKnown RBP17.21■□□□□ 0.35
UPK1A-202ENST00000379013 VPS33BQ9H267 617 aa17.21■□□□□ 0.35
UPK1A-202ENST00000379013 SPEF2Q9C093 1822 aa17.2■□□□□ 0.34
UPK1A-202ENST00000379013 ANKRD18BA2A2Z9 1011 aa17.2■□□□□ 0.34
UPK1A-202ENST00000379013 RIMBP2O15034 1052 aa17.2■□□□□ 0.34
UPK1A-202ENST00000379013 CSF1RP07333 972 aa17.2■□□□□ 0.34
UPK1A-202ENST00000379013 FOXO4P98177 505 aa17.2■□□□□ 0.34
UPK1A-202ENST00000379013 ATP8B2P98198 1209 aa17.2■□□□□ 0.34
UPK1A-202ENST00000379013 HSP90AB4PQ58FF6 505 aa17.2■□□□□ 0.34
UPK1A-202ENST00000379013 TBC1D16Q8TBP0 767 aa17.2■□□□□ 0.34
UPK1A-202ENST00000379013 C1orf115Q9H7X2 142 aa17.2■□□□□ 0.34
UPK1A-202ENST00000379013 PPP4R2Q9NY27 417 aa17.2■□□□□ 0.34
UPK1A-202ENST00000379013 GMPSP49915 693 aaPredicted RBP17.19■□□□□ 0.34
UPK1A-202ENST00000379013 DOK7Q18PE1 504 aa17.19■□□□□ 0.34
UPK1A-202ENST00000379013 TMC4Q7Z404 712 aa17.19■□□□□ 0.34
UPK1A-202ENST00000379013 JMYQ8N9B5 988 aa17.19■□□□□ 0.34
UPK1A-202ENST00000379013 SUPT20HQ8NEM7 779 aa17.19■□□□□ 0.34
UPK1A-202ENST00000379013 CCDC136Q96JN2 1154 aa17.19■□□□□ 0.34
UPK1A-202ENST00000379013 TMX4Q9H1E5 349 aaPredicted RBP17.19■□□□□ 0.34
UPK1A-202ENST00000379013 GREM2Q9H772 168 aa17.19■□□□□ 0.34
UPK1A-202ENST00000379013 DBNDD1Q9H9R9 158 aa17.19■□□□□ 0.34
UPK1A-202ENST00000379013 FBXO3Q9UK99 471 aa17.19■□□□□ 0.34
UPK1A-202ENST00000379013 CLEC11AQ9Y240 323 aa17.19■□□□□ 0.34
UPK1A-202ENST00000379013 SCN4AP35499 1836 aa17.19■□□□□ 0.34
UPK1A-202ENST00000379013 HIRAP54198 1017 aaPredicted RBP17.18■□□□□ 0.34
UPK1A-202ENST00000379013 HDAC1Q13547 482 aaPredicted RBP17.18■□□□□ 0.34
UPK1A-202ENST00000379013 CNTROBQ8N137 903 aa17.18■□□□□ 0.34
UPK1A-202ENST00000379013 KAZALD1Q96I82 304 aa17.18■□□□□ 0.34
UPK1A-202ENST00000379013 ZBTB12Q9Y330 459 aaPredicted RBP17.18■□□□□ 0.34
UPK1A-202ENST00000379013 C6orf229H3BNL8 230 aa17.17■□□□□ 0.34
UPK1A-202ENST00000379013 IGHMBP2P38935 993 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms