RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 ARHGEF2Q92974 986 aaKnown RBP12.88□□□□□ -0.35
ITM2B-202ENST00000378565 EHMT1Q9H9B1 1298 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 ABCC11Q96J66 1382 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 MRPS9P82933 396 aaKnown RBP12.88□□□□□ -0.35
ITM2B-202ENST00000378565 USP37Q86T82 979 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 DDX27Q96GQ7 796 aaKnown RBP12.88□□□□□ -0.35
ITM2B-202ENST00000378565 RBM5P52756 815 aaKnown RBP eCLIP12.88□□□□□ -0.35
ITM2B-202ENST00000378565 ZNF569Q5MCW4 686 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 ABTB2Q8N961 1025 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 FAM177BA6PVY3 158 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 SULT6B1Q6IMI4 303 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 CCDC25Q86WR0 208 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 SMARCA5O60264 1052 aaPredicted RBP12.88□□□□□ -0.35
ITM2B-202ENST00000378565 IDEP14735 1019 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 PPP1R7Q15435 360 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 SYT10Q6XYQ8 523 aa12.88□□□□□ -0.35
ITM2B-202ENST00000378565 GPR161Q8N6U8 529 aaKnown RBP12.88□□□□□ -0.35
ITM2B-202ENST00000378565 ZNF213O14771 459 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 NLRP5P59047 1200 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
ITM2B-202ENST00000378565 GOLGA6BA6NDN3 693 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 PRR16Q569H4 304 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 TRIM4Q9C037 500 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 GOLGA8AA7E2F4 631 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 EVI5LQ96CN4 794 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 DNAJC25Q9H1X3 360 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 EHBP1L1Q8N3D4 1523 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 NDC80O14777 642 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 PSMA7O14818 248 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 SPATS2LQ9NUQ6 558 aaKnown RBP12.87□□□□□ -0.35
ITM2B-202ENST00000378565 NCOA2Q15596 1464 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 RASSF2P50749 326 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 TAOK1Q7L7X3 1001 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 HFM1A2PYH4 1435 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 MINDY4BA8MYZ0 360 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 PPFIA1Q13136 1202 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 CCDC26Q8TAB7 109 aa12.87□□□□□ -0.35
ITM2B-202ENST00000378565 U2AF2P26368 475 aaKnown RBP eCLIP12.86□□□□□ -0.352e-13■■■□□ 14.9
ITM2B-202ENST00000378565 CALCOCO2Q13137 446 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 ZMAT2Q96NC0 199 aaKnown RBP12.86□□□□□ -0.35
ITM2B-202ENST00000378565 HECW1Q76N89 1606 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 SLC8A1P32418 973 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 RRAGBQ5VZM2 374 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 VCX3AQ9NNX9 186 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 RARSP54136 660 aaKnown RBP12.86□□□□□ -0.35
ITM2B-202ENST00000378565 MIER3Q7Z3K6 550 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 TDRD9Q8NDG6 1382 aaKnown RBP12.86□□□□□ -0.35
ITM2B-202ENST00000378565 LMOD1P29536 600 aaPredicted RBP12.86□□□□□ -0.35
ITM2B-202ENST00000378565 NUTM2GQ5VZR2 741 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 BTBD11A6QL63 1104 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 UBXN1Q04323 297 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 PNMA8AQ86V59 439 aaPredicted RBP12.86□□□□□ -0.35
ITM2B-202ENST00000378565 RAB3IPQ96QF0 476 aaPredicted RBP12.86□□□□□ -0.35
ITM2B-202ENST00000378565 BOLA2Q9H3K6 86 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 HMGB1P1B2RPK0 211 aaPredicted RBP12.86□□□□□ -0.35
ITM2B-202ENST00000378565 TBCAO75347 108 aaKnown RBP12.86□□□□□ -0.35
ITM2B-202ENST00000378565 SMARCA4P51532 1647 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 FCHSD2O94868 740 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 METAP2P50579 478 aaKnown RBP eCLIP12.86□□□□□ -0.35
ITM2B-202ENST00000378565 RAB11FIP4Q86YS3 637 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 MKNK2Q9HBH9 465 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 ZSCAN26Q16670 478 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 C20orf194Q5TEA3 1177 aa12.86□□□□□ -0.35
ITM2B-202ENST00000378565 IFIT3O14879 490 aaKnown RBP12.85□□□□□ -0.35
ITM2B-202ENST00000378565 IARSP41252 1262 aaKnown RBP12.85□□□□□ -0.35
ITM2B-202ENST00000378565 MUM1Q2TAK8 710 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 ANKRD24Q8TF21 1146 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 UTP11Q9Y3A2 253 aaKnown RBP12.85□□□□□ -0.35
ITM2B-202ENST00000378565 MYH10P35580 1976 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 TTF1Q15361 905 aaPredicted RBP12.85□□□□□ -0.35
ITM2B-202ENST00000378565 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.85□□□□□ -0.35
ITM2B-202ENST00000378565 CCDC82Q8N4S0 544 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 GSDMBQ8TAX9 411 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 DDX54Q8TDD1 881 aaKnown RBP12.85□□□□□ -0.35
ITM2B-202ENST00000378565 HSP90AA4PQ58FG1 418 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 SPATS2Q86XZ4 545 aaKnown RBP12.85□□□□□ -0.35
ITM2B-202ENST00000378565 CETN3O15182 167 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 COG7P83436 770 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 TRPC3Q13507 836 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 IFT20Q8IY31 132 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 TLDC2A0PJX2 215 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 RLBP1P12271 317 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 IGHMBP2P38935 993 aaKnown RBP12.85□□□□□ -0.35
ITM2B-202ENST00000378565 SDCCAG8Q86SQ7 713 aaPredicted RBP12.85□□□□□ -0.35
ITM2B-202ENST00000378565 SNX21Q969T3 373 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 BICDL2A1A5D9 508 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 WHAMMQ8TF30 809 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 TMX3Q96JJ7 454 aa12.85□□□□□ -0.35
ITM2B-202ENST00000378565 RANBP6O60518 1105 aaKnown RBP12.84□□□□□ -0.35
ITM2B-202ENST00000378565 HSPA1LP34931 641 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 ZNF131P52739 623 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 MAP3K12Q12852 859 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 RAB3GAP1Q15042 981 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 RUFY4Q6ZNE9 571 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 MICU3Q86XE3 530 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 VPS52Q8N1B4 723 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 SSH1Q8WYL5 1049 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 BAG1Q99933 345 aaPredicted RBP12.84□□□□□ -0.35
ITM2B-202ENST00000378565 ATAD2Q6PL18 1390 aa12.84□□□□□ -0.35
ITM2B-202ENST00000378565 ELF2Q15723 593 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms