RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 DHX58Q96C10 678 aa18.58■□□□□ 0.57
RGP1-201ENST00000378078 CFTRP13569 1480 aa18.58■□□□□ 0.57
RGP1-201ENST00000378078 KIF4AO95239 1232 aa18.58■□□□□ 0.57
RGP1-201ENST00000378078 ADCY5O95622 1261 aa18.58■□□□□ 0.57
RGP1-201ENST00000378078 SF3A3Q12874 501 aaKnown RBP eCLIP18.58■□□□□ 0.57
RGP1-201ENST00000378078 FBXO31Q5XUX0 539 aaPredicted RBP18.58■□□□□ 0.57
RGP1-201ENST00000378078 ASIC1P78348 528 aa18.58■□□□□ 0.56
RGP1-201ENST00000378078 SNW1Q13573 536 aaKnown RBP18.58■□□□□ 0.56
RGP1-201ENST00000378078 CCDC155Q8N6L0 562 aa18.58■□□□□ 0.56
RGP1-201ENST00000378078 HMGB1P09429 215 aaKnown RBP18.58■□□□□ 0.56
RGP1-201ENST00000378078 STX1AQ16623 288 aa18.58■□□□□ 0.56
RGP1-201ENST00000378078 CCDC24Q8N4L8 307 aa18.58■□□□□ 0.56
RGP1-201ENST00000378078 POLD1P28340 1107 aa18.57■□□□□ 0.56
RGP1-201ENST00000378078 NEK1Q96PY6 1258 aa18.57■□□□□ 0.56
RGP1-201ENST00000378078 LDHCP07864 332 aa18.57■□□□□ 0.56
RGP1-201ENST00000378078 SSH1Q8WYL5 1049 aa18.57■□□□□ 0.56
RGP1-201ENST00000378078 PHF8Q9UPP1 1060 aa18.57■□□□□ 0.56
RGP1-201ENST00000378078 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.57■□□□□ 0.56
RGP1-201ENST00000378078 TNNI2P48788 182 aa18.57■□□□□ 0.56
RGP1-201ENST00000378078 MCM3P25205 808 aa18.57■□□□□ 0.56
RGP1-201ENST00000378078 GNG11P61952 73 aa18.57■□□□□ 0.56
RGP1-201ENST00000378078 CCDC117Q8IWD4 279 aaPredicted RBP18.57■□□□□ 0.56
RGP1-201ENST00000378078 MAGEB6Q8N7X4 407 aa18.57■□□□□ 0.56
RGP1-201ENST00000378078 SPAG5Q96R06 1193 aa18.57■□□□□ 0.56
RGP1-201ENST00000378078 TTLL3Q9Y4R7 772 aa18.57■□□□□ 0.56
RGP1-201ENST00000378078 IMPG2Q9BZV3 1241 aa18.57■□□□□ 0.56
RGP1-201ENST00000378078 ZBTB16Q05516 673 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 RPAP2Q8IXW5 612 aaPredicted RBP18.56■□□□□ 0.56
RGP1-201ENST00000378078 ALG1Q9BT22 464 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 KCNK9Q9NPC2 374 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 PPP4R3BQ5MIZ7 849 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 MICALCLQ6ZW33 695 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 MAGEB6P1A0A0J9YX57 407 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 ERMNQ8TAM6 284 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 EVI5LQ96CN4 794 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 PI4KAP2A4QPH2 592 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 AKR1B10O60218 316 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 STX17P56962 302 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 NAA16Q6N069 864 aaPredicted RBP18.56■□□□□ 0.56
RGP1-201ENST00000378078 PI4KAP1Q8N8J0 262 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 GPCPD1Q9NPB8 672 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 LIMCH1Q9UPQ0 1083 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 SPDYE3A6NKU9 549 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 CFAP57Q96MR6 1250 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 NAP1L3Q99457 506 aaPredicted RBP18.56■□□□□ 0.56
RGP1-201ENST00000378078 CHPF2Q9P2E5 772 aa18.56■□□□□ 0.56
RGP1-201ENST00000378078 C9orf84Q5VXU9 1444 aa18.55■□□□□ 0.56
RGP1-201ENST00000378078 ERCC3P19447 782 aa18.55■□□□□ 0.56
RGP1-201ENST00000378078 AMOTQ4VCS5 1084 aa18.55■□□□□ 0.56
RGP1-201ENST00000378078 SLU7O95391 586 aaKnown RBP18.55■□□□□ 0.56
RGP1-201ENST00000378078 SATB1Q01826 763 aa18.55■□□□□ 0.56
RGP1-201ENST00000378078 FAM169AQ9Y6X4 670 aa18.55■□□□□ 0.56
RGP1-201ENST00000378078 POGZQ7Z3K3 1410 aa18.55■□□□□ 0.56
RGP1-201ENST00000378078 NAA25Q14CX7 972 aa18.55■□□□□ 0.56
RGP1-201ENST00000378078 NBPF8Q3BBV2 869 aa18.55■□□□□ 0.56
RGP1-201ENST00000378078 HGSO14964 777 aaPredicted RBP18.55■□□□□ 0.56
RGP1-201ENST00000378078 NACA2Q9H009 215 aa18.55■□□□□ 0.56
RGP1-201ENST00000378078 CGNQ9P2M7 1197 aaKnown RBP18.55■□□□□ 0.56
RGP1-201ENST00000378078 RAPGEF1Q13905 1077 aa18.55■□□□□ 0.56
RGP1-201ENST00000378078 SPECC1LQ69YQ0 1117 aa18.55■□□□□ 0.56
RGP1-201ENST00000378078 IFT81Q8WYA0 676 aa18.55■□□□□ 0.56
RGP1-201ENST00000378078 NSFL1CQ9UNZ2 370 aaKnown RBP18.55■□□□□ 0.56
RGP1-201ENST00000378078 AGTPBP1Q9UPW5 1226 aa18.55■□□□□ 0.56
RGP1-201ENST00000378078 MYCP01106 439 aaPredicted RBP18.55■□□□□ 0.56
RGP1-201ENST00000378078 UBASH3AP57075 661 aa18.55■□□□□ 0.56
RGP1-201ENST00000378078 RNASE9P60153 205 aaKnown RBP18.55■□□□□ 0.56
RGP1-201ENST00000378078 TXNDC16Q9P2K2 825 aa18.55■□□□□ 0.56
RGP1-201ENST00000378078 BACH2Q9BYV9 841 aa18.54■□□□□ 0.56
RGP1-201ENST00000378078 RTN1Q16799 776 aa18.54■□□□□ 0.56
RGP1-201ENST00000378078 CEP135Q66GS9 1140 aa18.54■□□□□ 0.56
RGP1-201ENST00000378078 SYNJ2O15056 1496 aa18.54■□□□□ 0.56
RGP1-201ENST00000378078 SYKP43405 635 aa18.54■□□□□ 0.56
RGP1-201ENST00000378078 ZNF804AQ7Z570 1209 aa18.54■□□□□ 0.56
RGP1-201ENST00000378078 JDP2Q8WYK2 163 aa18.53■□□□□ 0.56
RGP1-201ENST00000378078 CCT6BQ92526 530 aa18.53■□□□□ 0.56
RGP1-201ENST00000378078 EPSTI1Q96J88 318 aa18.53■□□□□ 0.56
RGP1-201ENST00000378078 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.53■□□□□ 0.56
RGP1-201ENST00000378078 CCDC61Q9Y6R9 512 aa18.53■□□□□ 0.56
RGP1-201ENST00000378078 V9GYY5 206 aaPredicted RBP18.53■□□□□ 0.56
RGP1-201ENST00000378078 MYCLP12524 364 aaPredicted RBP18.53■□□□□ 0.56
RGP1-201ENST00000378078 CKAP4Q07065 602 aaKnown RBP18.53■□□□□ 0.56
RGP1-201ENST00000378078 KMT5BQ4FZB7 885 aa18.53■□□□□ 0.56
RGP1-201ENST00000378078 CFAP157Q5JU67 520 aa18.53■□□□□ 0.56
RGP1-201ENST00000378078 Q6ZUG5 572 aa18.53■□□□□ 0.56
RGP1-201ENST00000378078 SCAND2PQ9GZW5 306 aaPredicted RBP18.53■□□□□ 0.56
RGP1-201ENST00000378078 ZHX1Q9UKY1 873 aaPredicted RBP18.53■□□□□ 0.56
RGP1-201ENST00000378078 CNPY2Q9Y2B0 182 aa18.53■□□□□ 0.56
RGP1-201ENST00000378078 KIFC2Q96AC6 838 aa18.52■□□□□ 0.56
RGP1-201ENST00000378078 KARSQ15046 597 aaKnown RBP18.52■□□□□ 0.56
RGP1-201ENST00000378078 DAAM2Q86T65 1068 aa18.52■□□□□ 0.56
RGP1-201ENST00000378078 MCM9Q9NXL9 1143 aa18.52■□□□□ 0.56
RGP1-201ENST00000378078 DBF4Q9UBU7 674 aaPredicted RBP18.52■□□□□ 0.56
RGP1-201ENST00000378078 ESPNB1AK53 854 aa18.52■□□□□ 0.55
RGP1-201ENST00000378078 ABL1P00519 1130 aa18.52■□□□□ 0.55
RGP1-201ENST00000378078 ZBTB43O43298 467 aa18.51■□□□□ 0.55
RGP1-201ENST00000378078 PPP1R7Q15435 360 aa18.51■□□□□ 0.55
RGP1-201ENST00000378078 PPP1R9BQ96SB3 815 aa18.51■□□□□ 0.55
RGP1-201ENST00000378078 C6orf50Q9HD87 102 aa18.51■□□□□ 0.55
RGP1-201ENST00000378078 CCDC169A6NNP5 214 aa18.51■□□□□ 0.55
RGP1-201ENST00000378078 DAPK3O43293 454 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms