RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 PANK1Q8TE04 598 aa28.39■■■□□ 2.14
YIF1A-202ENST00000376899 MPHOSPH8Q99549 860 aa28.39■■■□□ 2.14
YIF1A-202ENST00000376899 NSFL1CQ9UNZ2 370 aaKnown RBP28.39■■■□□ 2.14
YIF1A-202ENST00000376899 PLIN1O60240 522 aa28.38■■■□□ 2.13
YIF1A-202ENST00000376899 XDHP47989 1333 aa28.38■■■□□ 2.13
YIF1A-202ENST00000376899 ZNF594Q96JF6 807 aaPredicted RBP28.36■■■□□ 2.13
YIF1A-202ENST00000376899 POLLQ9UGP5 575 aa28.36■■■□□ 2.13
YIF1A-202ENST00000376899 ZBTB7BO15156 539 aaPredicted RBP28.35■■■□□ 2.13
YIF1A-202ENST00000376899 PDE3AQ14432 1141 aa28.35■■■□□ 2.13
YIF1A-202ENST00000376899 TAF7LQ5H9L4 462 aa28.35■■■□□ 2.13
YIF1A-202ENST00000376899 TBC1D16Q8TBP0 767 aa28.35■■■□□ 2.13
YIF1A-202ENST00000376899 PPIP5K2O43314 1243 aa28.34■■■□□ 2.13
YIF1A-202ENST00000376899 GNAI2P04899 355 aa28.34■■■□□ 2.13
YIF1A-202ENST00000376899 RFX5P48382 616 aaPredicted RBP28.34■■■□□ 2.13
YIF1A-202ENST00000376899 KIAA2012Q0VF49 1180 aa28.34■■■□□ 2.13
YIF1A-202ENST00000376899 MTX1Q13505 466 aa28.34■■■□□ 2.13
YIF1A-202ENST00000376899 MVPQ14764 893 aaKnown RBP28.34■■■□□ 2.13
YIF1A-202ENST00000376899 ANKIB1Q9P2G1 1089 aa28.34■■■□□ 2.13
YIF1A-202ENST00000376899 GGA1Q9UJY5 639 aa28.34■■■□□ 2.13
YIF1A-202ENST00000376899 AOC3Q16853 763 aa28.33■■■□□ 2.13
YIF1A-202ENST00000376899 LARGE2Q8N3Y3 721 aa28.33■■■□□ 2.13
YIF1A-202ENST00000376899 ANKRD2Q9GZV1 360 aa28.33■■■□□ 2.13
YIF1A-202ENST00000376899 UFL1O94874 794 aa28.32■■■□□ 2.12
YIF1A-202ENST00000376899 ATP2B4P23634 1241 aa28.32■■■□□ 2.12
YIF1A-202ENST00000376899 CHRNDQ07001 517 aa28.32■■■□□ 2.12
YIF1A-202ENST00000376899 LDHAL6AQ6ZMR3 332 aa28.32■■■□□ 2.12
YIF1A-202ENST00000376899 ZNF784Q8NCA9 323 aaPredicted RBP28.32■■■□□ 2.12
YIF1A-202ENST00000376899 C6orf229H3BNL8 230 aa28.31■■■□□ 2.12
YIF1A-202ENST00000376899 EYA3Q99504 573 aa28.31■■■□□ 2.12
YIF1A-202ENST00000376899 FZD9O00144 591 aa28.3■■■□□ 2.12
YIF1A-202ENST00000376899 WASHC4Q2M389 1173 aa28.3■■■□□ 2.12
YIF1A-202ENST00000376899 C20orf194Q5TEA3 1177 aa28.3■■■□□ 2.12
YIF1A-202ENST00000376899 JDP2Q8WYK2 163 aa28.3■■■□□ 2.12
YIF1A-202ENST00000376899 CNNM1Q9NRU3 951 aa28.3■■■□□ 2.12
YIF1A-202ENST00000376899 LEMD3Q9Y2U8 911 aa28.3■■■□□ 2.12
YIF1A-202ENST00000376899 PTPN12Q05209 780 aaKnown RBP28.29■■■□□ 2.12
YIF1A-202ENST00000376899 PUS3Q9BZE2 481 aaKnown RBP28.29■■■□□ 2.12
YIF1A-202ENST00000376899 DDX19BQ9UMR2 479 aa28.29■■■□□ 2.12
YIF1A-202ENST00000376899 COG6Q9Y2V7 657 aa28.29■■■□□ 2.12
YIF1A-202ENST00000376899 RIPOR2Q9Y4F9 1068 aa28.29■■■□□ 2.12
YIF1A-202ENST00000376899 RRP1P56182 461 aaKnown RBP28.28■■■□□ 2.12
YIF1A-202ENST00000376899 NIM1KQ8IY84 436 aa28.28■■■□□ 2.12
YIF1A-202ENST00000376899 MED23Q9ULK4 1368 aa28.27■■■□□ 2.12
YIF1A-202ENST00000376899 GLTPD2A6NH11 291 aa28.27■■■□□ 2.12
YIF1A-202ENST00000376899 KLHDC4Q8TBB5 520 aa28.27■■■□□ 2.12
YIF1A-202ENST00000376899 GPR101Q96P66 508 aaPredicted RBP28.27■■■□□ 2.12
YIF1A-202ENST00000376899 LRRC24Q50LG9 513 aa28.26■■■□□ 2.11
YIF1A-202ENST00000376899 FBXO3Q9UK99 471 aa28.26■■■□□ 2.11
YIF1A-202ENST00000376899 WDR90Q96KV7 1748 aa28.26■■■□□ 2.11
YIF1A-202ENST00000376899 ZNF804BA4D1E1 1349 aa28.25■■■□□ 2.11
YIF1A-202ENST00000376899 MROH5Q6ZUA9 1318 aa28.25■■■□□ 2.11
YIF1A-202ENST00000376899 ZNF541Q9H0D2 1346 aa28.25■■■□□ 2.11
YIF1A-202ENST00000376899 WTIPA6NIX2 430 aaPredicted RBP28.25■■■□□ 2.11
YIF1A-202ENST00000376899 ZC3H12CQ9C0D7 883 aaKnown RBP28.25■■■□□ 2.11
YIF1A-202ENST00000376899 COPRSQ9NQ92 184 aa28.25■■■□□ 2.11
YIF1A-202ENST00000376899 SRGAP3O43295 1099 aa28.24■■■□□ 2.11
YIF1A-202ENST00000376899 HELBQ8NG08 1087 aaPredicted RBP28.24■■■□□ 2.11
YIF1A-202ENST00000376899 ZNRF3Q9ULT6 936 aa28.24■■■□□ 2.11
YIF1A-202ENST00000376899 KDM2BQ8NHM5 1336 aa28.23■■■□□ 2.11
YIF1A-202ENST00000376899 EYA2O00167 538 aa28.23■■■□□ 2.11
YIF1A-202ENST00000376899 RIMBP2O15034 1052 aa28.23■■■□□ 2.11
YIF1A-202ENST00000376899 TAF5LO75529 589 aa28.23■■■□□ 2.11
YIF1A-202ENST00000376899 CIAO1O76071 339 aa28.23■■■□□ 2.11
YIF1A-202ENST00000376899 DPY19L2Q6NUT2 758 aa28.23■■■□□ 2.11
YIF1A-202ENST00000376899 C1orf115Q9H7X2 142 aa28.23■■■□□ 2.11
YIF1A-202ENST00000376899 PSME4Q14997 1843 aa28.22■■■□□ 2.11
YIF1A-202ENST00000376899 IRS2Q9Y4H2 1338 aa28.22■■■□□ 2.11
YIF1A-202ENST00000376899 PNMA6EA0A0J9YXQ4 647 aa28.22■■■□□ 2.11
YIF1A-202ENST00000376899 EIF6P56537 245 aaKnown RBP28.22■■■□□ 2.11
YIF1A-202ENST00000376899 C15orf52Q6ZUT6 534 aaKnown RBP28.22■■■□□ 2.11
YIF1A-202ENST00000376899 VGLL2Q8N8G2 317 aa28.22■■■□□ 2.11
YIF1A-202ENST00000376899 CHMP4BQ9H444 224 aaKnown RBP28.22■■■□□ 2.11
YIF1A-202ENST00000376899 ZBTB40Q9NUA8 1239 aa28.22■■■□□ 2.11
YIF1A-202ENST00000376899 ATP8B2P98198 1209 aa28.21■■■□□ 2.11
YIF1A-202ENST00000376899 POLA2Q14181 598 aa28.21■■■□□ 2.11
YIF1A-202ENST00000376899 ATG9AQ7Z3C6 839 aa28.21■■■□□ 2.11
YIF1A-202ENST00000376899 ZNF526Q8TF50 670 aaPredicted RBP28.21■■■□□ 2.11
YIF1A-202ENST00000376899 GPBP1L1Q9HC44 474 aaPredicted RBP28.21■■■□□ 2.11
YIF1A-202ENST00000376899 SCN9AQ15858 1988 aa28.2■■■□□ 2.11
YIF1A-202ENST00000376899 YDJCA8MPS7 323 aa28.2■■■□□ 2.1
YIF1A-202ENST00000376899 KCNJ4P48050 445 aa28.2■■■□□ 2.1
YIF1A-202ENST00000376899 DBNDD1Q9H9R9 158 aa28.2■■■□□ 2.1
YIF1A-202ENST00000376899 PA2G4Q9UQ80 394 aaKnown RBP28.2■■■□□ 2.1
YIF1A-202ENST00000376899 SNAP23O00161 211 aa28.19■■■□□ 2.1
YIF1A-202ENST00000376899 ECE2O60344 883 aa28.19■■■□□ 2.1
YIF1A-202ENST00000376899 DDNO94850 711 aaPredicted RBP28.19■■■□□ 2.1
YIF1A-202ENST00000376899 UBE4AQ14139 1066 aa28.19■■■□□ 2.1
YIF1A-202ENST00000376899 METTL24Q5JXM2 366 aa28.19■■■□□ 2.1
YIF1A-202ENST00000376899 SSH3Q8TE77 659 aa28.19■■■□□ 2.1
YIF1A-202ENST00000376899 KLRK1P26718 216 aa28.18■■■□□ 2.1
YIF1A-202ENST00000376899 DOK7Q18PE1 504 aa28.18■■■□□ 2.1
YIF1A-202ENST00000376899 CEP85Q6P2H3 762 aa28.18■■■□□ 2.1
YIF1A-202ENST00000376899 TXNRD3Q86VQ6 643 aa28.18■■■□□ 2.1
YIF1A-202ENST00000376899 GPC2Q8N158 579 aa28.18■■■□□ 2.1
YIF1A-202ENST00000376899 L3MBTL3Q96JM7 780 aaPredicted RBP28.18■■■□□ 2.1
YIF1A-202ENST00000376899 SCN4AP35499 1836 aa28.18■■■□□ 2.1
YIF1A-202ENST00000376899 PDE8BO95263 885 aa28.17■■■□□ 2.1
YIF1A-202ENST00000376899 CXCL9Q07325 125 aa28.17■■■□□ 2.1
YIF1A-202ENST00000376899 SIL1Q9H173 461 aa28.17■■■□□ 2.1
YIF1A-202ENST00000376899 ZNF646O15015 1829 aaPredicted RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms