RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ZBTB9Q96C00 473 aa14.28□□□□□ -0.12
C9orf3-203ENST00000375315 SLU7O95391 586 aaKnown RBP14.28□□□□□ -0.12
C9orf3-203ENST00000375315 HOXB7P09629 217 aa14.28□□□□□ -0.12
C9orf3-203ENST00000375315 ANAPC15P60006 121 aa14.28□□□□□ -0.12
C9orf3-203ENST00000375315 TPM4P67936 248 aa14.28□□□□□ -0.12
C9orf3-203ENST00000375315 PTPN14Q15678 1187 aa14.28□□□□□ -0.12
C9orf3-203ENST00000375315 TBC1D2BQ9UPU7 963 aa14.28□□□□□ -0.12
C9orf3-203ENST00000375315 SPATA31A1Q5TZJ5 1347 aa14.28□□□□□ -0.12
C9orf3-203ENST00000375315 MMP14P50281 582 aa14.27□□□□□ -0.12
C9orf3-203ENST00000375315 NUTM1Q86Y26 1132 aa14.27□□□□□ -0.12
C9orf3-203ENST00000375315 FAM208AQ9UK61 1670 aaKnown RBP14.27□□□□□ -0.12
C9orf3-203ENST00000375315 FIBPO43427 364 aa14.27□□□□□ -0.13
C9orf3-203ENST00000375315 TRIM5Q9C035 493 aa14.27□□□□□ -0.13
C9orf3-203ENST00000375315 PHLPP1O60346 1717 aa14.26□□□□□ -0.13
C9orf3-203ENST00000375315 IGKV5-2P06315 115 aa14.26□□□□□ -0.13
C9orf3-203ENST00000375315 ZSCAN22P10073 491 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-203ENST00000375315 GTF3C6Q969F1 213 aa14.26□□□□□ -0.13
C9orf3-203ENST00000375315 EP400Q96L91 3159 aa14.26□□□□□ -0.13
C9orf3-203ENST00000375315 NHSL1Q5SYE7 1610 aa14.26□□□□□ -0.13
C9orf3-203ENST00000375315 NOP2P46087 812 aaKnown RBP14.26□□□□□ -0.13
C9orf3-203ENST00000375315 GPS2Q13227 327 aa14.26□□□□□ -0.13
C9orf3-203ENST00000375315 UNC5CLQ8IV45 518 aa14.26□□□□□ -0.13
C9orf3-203ENST00000375315 CWC15Q9P013 229 aaKnown RBP14.26□□□□□ -0.13
C9orf3-203ENST00000375315 A0A087WZG4 1122 aa14.26□□□□□ -0.13
C9orf3-203ENST00000375315 DHX16O60231 1041 aaKnown RBP14.26□□□□□ -0.13
C9orf3-203ENST00000375315 BRD2P25440 801 aaKnown RBP14.26□□□□□ -0.13
C9orf3-203ENST00000375315 HEG1Q9ULI3 1381 aa14.25□□□□□ -0.13
C9orf3-203ENST00000375315 SUCLG2Q96I99 432 aa14.25□□□□□ -0.13
C9orf3-203ENST00000375315 ZNF446Q9NWS9 450 aa14.25□□□□□ -0.13
C9orf3-203ENST00000375315 NEMFO60524 1076 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 CASQ1P31415 396 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 ZNF75DP51815 510 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 SLC4A9Q96Q91 983 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 BICC1Q9H694 974 aaKnown RBP14.24□□□□□ -0.13
C9orf3-203ENST00000375315 NRBP1Q9UHY1 535 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 LMO7Q8WWI1 1683 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 GRM8O00222 908 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 CLGNO14967 610 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 ATP8B2P98198 1209 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 SYT10Q6XYQ8 523 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 KRBA2Q6ZNG9 492 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 GOLGA6L1Q8N7Z2 621 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 KIF2AO00139 706 aaPredicted RBP14.24□□□□□ -0.13
C9orf3-203ENST00000375315 ATP6V1AP38606 617 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 MAP3K11Q16584 847 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 ICE2Q659A1 982 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 LINS1Q8NG48 757 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 NEK11Q8NG66 645 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 HDAC5Q9UQL6 1122 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 ZBTB1Q9Y2K1 713 aa14.24□□□□□ -0.13
C9orf3-203ENST00000375315 CRYBG1Q9Y4K1 1723 aa14.23□□□□□ -0.13
C9orf3-203ENST00000375315 ATP10DQ9P241 1426 aa14.23□□□□□ -0.13
C9orf3-203ENST00000375315 H2AFXP16104 143 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-203ENST00000375315 EPHA10Q5JZY3 1008 aa14.23□□□□□ -0.13
C9orf3-203ENST00000375315 LUZP1Q86V48 1076 aa14.23□□□□□ -0.13
C9orf3-203ENST00000375315 C10orf67Q8IYJ2 551 aa14.23□□□□□ -0.13
C9orf3-203ENST00000375315 SYNE4Q8N205 404 aa14.23□□□□□ -0.13
C9orf3-203ENST00000375315 CACTINQ8WUQ7 758 aaKnown RBP14.23□□□□□ -0.13
C9orf3-203ENST00000375315 RILPL2Q969X0 211 aa14.23□□□□□ -0.13
C9orf3-203ENST00000375315 CLIP2Q9UDT6 1046 aa14.23□□□□□ -0.13
C9orf3-203ENST00000375315 LRRC37A3O60309 1634 aa14.23□□□□□ -0.13
C9orf3-203ENST00000375315 MYO1CO00159 1063 aa14.23□□□□□ -0.13
C9orf3-203ENST00000375315 NKX1-1Q15270 411 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-203ENST00000375315 PLA2G4DQ86XP0 818 aa14.23□□□□□ -0.13
C9orf3-203ENST00000375315 FHOD1Q9Y613 1164 aa14.23□□□□□ -0.13
C9orf3-203ENST00000375315 SOS1Q07889 1333 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-203ENST00000375315 SPATA31A5Q5VU36 1347 aa14.22□□□□□ -0.13
C9orf3-203ENST00000375315 SPATA31A7Q8IWB4 1347 aa14.22□□□□□ -0.13
C9orf3-203ENST00000375315 NEURL1BA8MQ27 555 aa14.22□□□□□ -0.13
C9orf3-203ENST00000375315 STX6O43752 255 aa14.22□□□□□ -0.13
C9orf3-203ENST00000375315 F13A1P00488 732 aa14.22□□□□□ -0.13
C9orf3-203ENST00000375315 APPP05067 770 aa14.22□□□□□ -0.13
C9orf3-203ENST00000375315 TYRO3Q06418 890 aa14.22□□□□□ -0.13
C9orf3-203ENST00000375315 BRMS1Q9HCU9 246 aa14.22□□□□□ -0.13
C9orf3-203ENST00000375315 PNMA6AP0CW24 399 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-203ENST00000375315 AXDND1Q5T1B0 1012 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-203ENST00000375315 ARGLU1Q9NWB6 273 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-203ENST00000375315 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-203ENST00000375315 NYAP1Q6ZVC0 841 aa14.21□□□□□ -0.13
C9orf3-203ENST00000375315 MYCBPQ99417 103 aaPredicted RBP14.21□□□□□ -0.13
C9orf3-203ENST00000375315 METTL22Q9BUU2 404 aaPredicted RBP14.21□□□□□ -0.13
C9orf3-203ENST00000375315 LRRCC1Q9C099 1032 aa14.21□□□□□ -0.13
C9orf3-203ENST00000375315 TCHHQ07283 1943 aa14.21□□□□□ -0.13
C9orf3-203ENST00000375315 NPHP1O15259 732 aa14.21□□□□□ -0.13
C9orf3-203ENST00000375315 STARD3NLO95772 234 aa14.21□□□□□ -0.13
C9orf3-203ENST00000375315 ESYT1Q9BSJ8 1104 aa14.21□□□□□ -0.13
C9orf3-203ENST00000375315 NUP62CLQ9H1M0 184 aa14.21□□□□□ -0.13
C9orf3-203ENST00000375315 PALD1Q9ULE6 856 aa14.21□□□□□ -0.13
C9orf3-203ENST00000375315 MRVI1Q9Y6F6 885 aa14.21□□□□□ -0.13
C9orf3-203ENST00000375315 JCADQ9P266 1359 aa14.21□□□□□ -0.13
C9orf3-203ENST00000375315 GCKRQ14397 625 aa14.21□□□□□ -0.14
C9orf3-203ENST00000375315 CCDC191Q8NCU4 936 aa14.21□□□□□ -0.14
C9orf3-203ENST00000375315 CHMP4CQ96CF2 233 aa14.21□□□□□ -0.14
C9orf3-203ENST00000375315 FAM89AQ96GI7 184 aa14.21□□□□□ -0.14
C9orf3-203ENST00000375315 UPF3BQ9BZI7 483 aaKnown RBP14.21□□□□□ -0.14
C9orf3-203ENST00000375315 POLR3GO15318 223 aaPredicted RBP14.2□□□□□ -0.14
C9orf3-203ENST00000375315 PLA2G4AP47712 749 aa14.2□□□□□ -0.14
C9orf3-203ENST00000375315 ZSCAN26Q16670 478 aa14.2□□□□□ -0.14
C9orf3-203ENST00000375315 TMX1Q9H3N1 280 aa14.2□□□□□ -0.14
C9orf3-203ENST00000375315 CBX8Q9HC52 389 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms