RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 MINPP1Q9UNW1 487 aa18.95■□□□□ 0.62
PFDN6-203ENST00000374610 XDHP47989 1333 aa18.95■□□□□ 0.62
PFDN6-203ENST00000374610 NFKBIEO00221 500 aa18.94■□□□□ 0.62
PFDN6-203ENST00000374610 UFL1O94874 794 aa18.94■□□□□ 0.62
PFDN6-203ENST00000374610 CRBNQ96SW2 442 aa18.94■□□□□ 0.62
PFDN6-203ENST00000374610 PSMD1Q99460 953 aa18.94■□□□□ 0.62
PFDN6-203ENST00000374610 SIL1Q9H173 461 aa18.94■□□□□ 0.62
PFDN6-203ENST00000374610 ZNF277Q9NRM2 450 aaPredicted RBP18.94■□□□□ 0.62
PFDN6-203ENST00000374610 ZBTB40Q9NUA8 1239 aa18.94■□□□□ 0.62
PFDN6-203ENST00000374610 RNF181Q9P0P0 153 aa18.94■□□□□ 0.62
PFDN6-203ENST00000374610 ATP2B4P23634 1241 aa18.93■□□□□ 0.62
PFDN6-203ENST00000374610 ATP8B2P98198 1209 aa18.93■□□□□ 0.62
PFDN6-203ENST00000374610 CHRNDQ07001 517 aa18.93■□□□□ 0.62
PFDN6-203ENST00000374610 METTL24Q5JXM2 366 aa18.93■□□□□ 0.62
PFDN6-203ENST00000374610 C9orf131Q5VYM1 1079 aa18.93■□□□□ 0.62
PFDN6-203ENST00000374610 SLC51AQ86UW1 340 aa18.93■□□□□ 0.62
PFDN6-203ENST00000374610 LTBP3Q9NS15 1303 aa18.93■□□□□ 0.62
PFDN6-203ENST00000374610 PPIP5K2O43314 1243 aa18.92■□□□□ 0.62
PFDN6-203ENST00000374610 HMMRO75330 724 aa18.92■□□□□ 0.62
PFDN6-203ENST00000374610 G3BP1Q13283 466 aaKnown RBP eCLIP18.92■□□□□ 0.62
PFDN6-203ENST00000374610 OS9Q13438 667 aaPredicted RBP18.92■□□□□ 0.62
PFDN6-203ENST00000374610 MTX1Q13505 466 aa18.92■□□□□ 0.62
PFDN6-203ENST00000374610 LARGE2Q8N3Y3 721 aa18.92■□□□□ 0.62
PFDN6-203ENST00000374610 JDP2Q8WYK2 163 aa18.92■□□□□ 0.62
PFDN6-203ENST00000374610 MROH5Q6ZUA9 1318 aa18.92■□□□□ 0.62
PFDN6-203ENST00000374610 PNMA6EA0A0J9YXQ4 647 aa18.91■□□□□ 0.62
PFDN6-203ENST00000374610 RIMBP2O15034 1052 aa18.91■□□□□ 0.62
PFDN6-203ENST00000374610 IARSP41252 1262 aaKnown RBP18.91■□□□□ 0.62
PFDN6-203ENST00000374610 PTPN12Q05209 780 aaKnown RBP18.91■□□□□ 0.62
PFDN6-203ENST00000374610 WASHC4Q2M389 1173 aa18.91■□□□□ 0.62
PFDN6-203ENST00000374610 RPAP2Q8IXW5 612 aaPredicted RBP18.91■□□□□ 0.62
PFDN6-203ENST00000374610 HELBQ8NG08 1087 aaPredicted RBP18.91■□□□□ 0.62
PFDN6-203ENST00000374610 PUS3Q9BZE2 481 aaKnown RBP18.91■□□□□ 0.62
PFDN6-203ENST00000374610 ZC3H12CQ9C0D7 883 aaKnown RBP18.91■□□□□ 0.62
PFDN6-203ENST00000374610 PODXL2Q9NZ53 605 aa18.91■□□□□ 0.62
PFDN6-203ENST00000374610 PA2G4Q9UQ80 394 aaKnown RBP18.91■□□□□ 0.62
PFDN6-203ENST00000374610 LEMD3Q9Y2U8 911 aa18.91■□□□□ 0.62
PFDN6-203ENST00000374610 COL4A1P02462 1669 aa18.91■□□□□ 0.62
PFDN6-203ENST00000374610 FER1L6Q2WGJ9 1857 aa18.9■□□□□ 0.62
PFDN6-203ENST00000374610 EYA2O00167 538 aa18.9■□□□□ 0.62
PFDN6-203ENST00000374610 TAF5LO75529 589 aa18.9■□□□□ 0.62
PFDN6-203ENST00000374610 RFX5P48382 616 aaPredicted RBP18.9■□□□□ 0.62
PFDN6-203ENST00000374610 LRRC24Q50LG9 513 aa18.9■□□□□ 0.62
PFDN6-203ENST00000374610 CEP85Q6P2H3 762 aa18.9■□□□□ 0.62
PFDN6-203ENST00000374610 TBC1D16Q8TBP0 767 aa18.9■□□□□ 0.62
PFDN6-203ENST00000374610 FBXO3Q9UK99 471 aa18.9■□□□□ 0.62
PFDN6-203ENST00000374610 IRX6P78412 446 aaPredicted RBP18.89■□□□□ 0.61
PFDN6-203ENST00000374610 AOC3Q16853 763 aa18.89■□□□□ 0.61
PFDN6-203ENST00000374610 NIM1KQ8IY84 436 aa18.89■□□□□ 0.61
PFDN6-203ENST00000374610 RTFDC1Q9BY42 306 aaPredicted RBP18.89■□□□□ 0.61
PFDN6-203ENST00000374610 VPS33BQ9H267 617 aa18.89■□□□□ 0.61
PFDN6-203ENST00000374610 COPRSQ9NQ92 184 aa18.89■□□□□ 0.61
PFDN6-203ENST00000374610 CEP126Q9P2H0 1117 aa18.89■□□□□ 0.61
PFDN6-203ENST00000374610 POLLQ9UGP5 575 aa18.89■□□□□ 0.61
PFDN6-203ENST00000374610 LRRC37AA6NMS7 1700 aa18.88■□□□□ 0.61
PFDN6-203ENST00000374610 SURF6O75683 361 aaKnown RBP18.88■□□□□ 0.61
PFDN6-203ENST00000374610 CIAO1O76071 339 aa18.88■□□□□ 0.61
PFDN6-203ENST00000374610 IL15P40933 162 aaPredicted RBP18.88■□□□□ 0.61
PFDN6-203ENST00000374610 RIPOR2Q9Y4F9 1068 aa18.88■□□□□ 0.61
PFDN6-203ENST00000374610 ZNF804BA4D1E1 1349 aa18.88■□□□□ 0.61
PFDN6-203ENST00000374610 SSH3Q8TE77 659 aa18.87■□□□□ 0.61
PFDN6-203ENST00000374610 AAMPQ13685 434 aa18.86■□□□□ 0.61
PFDN6-203ENST00000374610 POLA2Q14181 598 aa18.86■□□□□ 0.61
PFDN6-203ENST00000374610 GPR101Q96P66 508 aaPredicted RBP18.86■□□□□ 0.61
PFDN6-203ENST00000374610 CHD4Q14839 1912 aa18.85■□□□□ 0.61
PFDN6-203ENST00000374610 PDE8BO95263 885 aa18.85■□□□□ 0.61
PFDN6-203ENST00000374610 NEFLP07196 543 aa18.85■□□□□ 0.61
PFDN6-203ENST00000374610 YY1P25490 414 aa18.85■□□□□ 0.61
PFDN6-203ENST00000374610 EIF6P56537 245 aaKnown RBP18.85■□□□□ 0.61
PFDN6-203ENST00000374610 KIAA2012Q0VF49 1180 aa18.85■□□□□ 0.61
PFDN6-203ENST00000374610 HSP90AB4PQ58FF6 505 aa18.85■□□□□ 0.61
PFDN6-203ENST00000374610 DPY19L2Q6NUT2 758 aa18.85■□□□□ 0.61
PFDN6-203ENST00000374610 EXOC6Q8TAG9 804 aa18.85■□□□□ 0.61
PFDN6-203ENST00000374610 GOLGB1Q14789 3259 aaKnown RBP18.85■□□□□ 0.61
PFDN6-203ENST00000374610 CCDC88AQ3V6T2 1871 aa18.84■□□□□ 0.61
PFDN6-203ENST00000374610 IFIT1P09914 478 aaKnown RBP18.84■□□□□ 0.61
PFDN6-203ENST00000374610 UBE4AQ14139 1066 aa18.84■□□□□ 0.61
PFDN6-203ENST00000374610 DOK7Q18PE1 504 aa18.84■□□□□ 0.61
PFDN6-203ENST00000374610 VPS37DQ86XT2 251 aa18.84■□□□□ 0.61
PFDN6-203ENST00000374610 SNED1Q8TER0 1413 aa18.83■□□□□ 0.61
PFDN6-203ENST00000374610 SLC5A1P13866 664 aa18.83■□□□□ 0.6
PFDN6-203ENST00000374610 PRELPP51888 382 aa18.83■□□□□ 0.6
PFDN6-203ENST00000374610 PUM3Q15397 648 aaKnown RBP18.83■□□□□ 0.6
PFDN6-203ENST00000374610 ATG9AQ7Z3C6 839 aa18.83■□□□□ 0.6
PFDN6-203ENST00000374610 DBNDD1Q9H9R9 158 aa18.83■□□□□ 0.6
PFDN6-203ENST00000374610 AKAP2Q9Y2D5 859 aa18.83■□□□□ 0.6
PFDN6-203ENST00000374610 SBF1O95248 1867 aa18.82■□□□□ 0.6
PFDN6-203ENST00000374610 SNAP23O00161 211 aa18.82■□□□□ 0.6
PFDN6-203ENST00000374610 APBB1O00213 710 aa18.82■□□□□ 0.6
PFDN6-203ENST00000374610 CAVIN4Q5BKX8 364 aa18.82■□□□□ 0.6
PFDN6-203ENST00000374610 ZNF804AQ7Z570 1209 aa18.82■□□□□ 0.6
PFDN6-203ENST00000374610 ERC1Q8IUD2 1116 aa18.82■□□□□ 0.6
PFDN6-203ENST00000374610 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
PFDN6-203ENST00000374610 ZNRF3Q9ULT6 936 aa18.82■□□□□ 0.6
PFDN6-203ENST00000374610 EXOC6BQ9Y2D4 811 aa18.82■□□□□ 0.6
PFDN6-203ENST00000374610 MED23Q9ULK4 1368 aa18.81■□□□□ 0.6
PFDN6-203ENST00000374610 ZC3H4Q9UPT8 1303 aaKnown RBP18.81■□□□□ 0.6
PFDN6-203ENST00000374610 ECE2O60344 883 aa18.81■□□□□ 0.6
PFDN6-203ENST00000374610 TFCP2Q12800 502 aa18.81■□□□□ 0.6
PFDN6-203ENST00000374610 ATP2B3Q16720 1220 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms