RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 ITPRIPQ8IWB1 547 aa25.37■■□□□ 1.65
SYNC-201ENST00000373484 RTKN2Q8IZC4 609 aa25.37■■□□□ 1.65
SYNC-201ENST00000373484 RASSF7Q02833 373 aa25.37■■□□□ 1.65
SYNC-201ENST00000373484 GRIPAP1Q4V328 841 aa25.37■■□□□ 1.65
SYNC-201ENST00000373484 HDAC5Q9UQL6 1122 aa25.37■■□□□ 1.65
SYNC-201ENST00000373484 CHMP3Q9Y3E7 222 aa25.37■■□□□ 1.65
SYNC-201ENST00000373484 LTBP3Q9NS15 1303 aa25.36■■□□□ 1.65
SYNC-201ENST00000373484 ANKRD18BA2A2Z9 1011 aa25.35■■□□□ 1.65
SYNC-201ENST00000373484 IFIT5Q13325 482 aaKnown RBP25.35■■□□□ 1.65
SYNC-201ENST00000373484 TMX4Q9H1E5 349 aaPredicted RBP25.35■■□□□ 1.65
SYNC-201ENST00000373484 TAOK3Q9H2K8 898 aa25.35■■□□□ 1.65
SYNC-201ENST00000373484 A0A1B0GUL6 1792 aa25.35■■□□□ 1.65
SYNC-201ENST00000373484 LRRFIP2Q9Y608 721 aaKnown RBP25.35■■□□□ 1.65
SYNC-201ENST00000373484 CCDC57Q2TAC2 916 aa25.34■■□□□ 1.65
SYNC-201ENST00000373484 FKBP4Q02790 459 aaKnown RBP eCLIP25.33■■□□□ 1.65
SYNC-201ENST00000373484 PSMD1Q99460 953 aa25.33■■□□□ 1.65
SYNC-201ENST00000373484 BSDC1Q9NW68 430 aaPredicted RBP25.33■■□□□ 1.65
SYNC-201ENST00000373484 DUOX1Q9NRD9 1551 aa25.33■■□□□ 1.64
SYNC-201ENST00000373484 ZBTB7BO15156 539 aaPredicted RBP25.33■■□□□ 1.64
SYNC-201ENST00000373484 IGHMBP2P38935 993 aaKnown RBP25.33■■□□□ 1.64
SYNC-201ENST00000373484 PRELPP51888 382 aa25.32■■□□□ 1.64
SYNC-201ENST00000373484 TIAM2Q8IVF5 1701 aa25.32■■□□□ 1.64
SYNC-201ENST00000373484 MVPQ14764 893 aaKnown RBP25.31■■□□□ 1.64
SYNC-201ENST00000373484 GNAI2P04899 355 aa25.3■■□□□ 1.64
SYNC-201ENST00000373484 LMNB1P20700 586 aa25.3■■□□□ 1.64
SYNC-201ENST00000373484 MPHOSPH8Q99549 860 aa25.3■■□□□ 1.64
SYNC-201ENST00000373484 COG6Q9Y2V7 657 aa25.3■■□□□ 1.64
SYNC-201ENST00000373484 MPNDQ8N594 471 aa25.3■■□□□ 1.64
SYNC-201ENST00000373484 DPP8Q6V1X1 898 aaPredicted RBP25.29■■□□□ 1.64
SYNC-201ENST00000373484 SKAP1Q86WV1 359 aa25.29■■□□□ 1.64
SYNC-201ENST00000373484 ZNF594Q96JF6 807 aaPredicted RBP25.29■■□□□ 1.64
SYNC-201ENST00000373484 RTFDC1Q9BY42 306 aaPredicted RBP25.29■■□□□ 1.64
SYNC-201ENST00000373484 DDX19BQ9UMR2 479 aa25.28■■□□□ 1.64
SYNC-201ENST00000373484 GPSM2P81274 684 aa25.28■■□□□ 1.64
SYNC-201ENST00000373484 TAF7LQ5H9L4 462 aa25.28■■□□□ 1.64
SYNC-201ENST00000373484 C9orf131Q5VYM1 1079 aa25.28■■□□□ 1.64
SYNC-201ENST00000373484 PODXL2Q9NZ53 605 aa25.28■■□□□ 1.64
SYNC-201ENST00000373484 MINPP1Q9UNW1 487 aa25.28■■□□□ 1.64
SYNC-201ENST00000373484 NSFL1CQ9UNZ2 370 aaKnown RBP25.28■■□□□ 1.64
SYNC-201ENST00000373484 ZNF277Q9NRM2 450 aaPredicted RBP25.27■■□□□ 1.64
SYNC-201ENST00000373484 RNF181Q9P0P0 153 aa25.27■■□□□ 1.64
SYNC-201ENST00000373484 MTX1Q13505 466 aa25.26■■□□□ 1.63
SYNC-201ENST00000373484 RFX5P48382 616 aaPredicted RBP25.26■■□□□ 1.63
SYNC-201ENST00000373484 SUPT20HQ8NEM7 779 aa25.26■■□□□ 1.63
SYNC-201ENST00000373484 LDHAL6AQ6ZMR3 332 aa25.25■■□□□ 1.63
SYNC-201ENST00000373484 IL27Q8NEV9 243 aa25.25■■□□□ 1.63
SYNC-201ENST00000373484 ANKIB1Q9P2G1 1089 aa25.25■■□□□ 1.63
SYNC-201ENST00000373484 XDHP47989 1333 aa25.24■■□□□ 1.63
SYNC-201ENST00000373484 IARSP41252 1262 aaKnown RBP25.24■■□□□ 1.63
SYNC-201ENST00000373484 POLLQ9UGP5 575 aa25.23■■□□□ 1.63
SYNC-201ENST00000373484 COL4A5P29400 1685 aa25.23■■□□□ 1.63
SYNC-201ENST00000373484 CHRNDQ07001 517 aa25.23■■□□□ 1.63
SYNC-201ENST00000373484 KLHDC4Q8TBB5 520 aa25.23■■□□□ 1.63
SYNC-201ENST00000373484 TBC1D16Q8TBP0 767 aa25.23■■□□□ 1.63
SYNC-201ENST00000373484 VPS33BQ9H267 617 aa25.23■■□□□ 1.63
SYNC-201ENST00000373484 C1orf115Q9H7X2 142 aa25.23■■□□□ 1.63
SYNC-201ENST00000373484 CNNM1Q9NRU3 951 aa25.23■■□□□ 1.63
SYNC-201ENST00000373484 PTPN12Q05209 780 aaKnown RBP25.22■■□□□ 1.63
SYNC-201ENST00000373484 GGA1Q9UJY5 639 aa25.22■■□□□ 1.63
SYNC-201ENST00000373484 PUS3Q9BZE2 481 aaKnown RBP25.21■■□□□ 1.63
SYNC-201ENST00000373484 ANKRD2Q9GZV1 360 aa25.21■■□□□ 1.63
SYNC-201ENST00000373484 CHMP4BQ9H444 224 aaKnown RBP25.21■■□□□ 1.63
SYNC-201ENST00000373484 ZBTB40Q9NUA8 1239 aa25.21■■□□□ 1.63
SYNC-201ENST00000373484 ZC3H4Q9UPT8 1303 aaKnown RBP25.21■■□□□ 1.63
SYNC-201ENST00000373484 C6orf229H3BNL8 230 aa25.21■■□□□ 1.63
SYNC-201ENST00000373484 SRGAP3O43295 1099 aa25.21■■□□□ 1.63
SYNC-201ENST00000373484 BECN1Q14457 450 aa25.21■■□□□ 1.63
SYNC-201ENST00000373484 RIPOR2Q9Y4F9 1068 aa25.21■■□□□ 1.63
SYNC-201ENST00000373484 UFL1O94874 794 aa25.2■■□□□ 1.62
SYNC-201ENST00000373484 ATP2B4P23634 1241 aa25.2■■□□□ 1.62
SYNC-201ENST00000373484 YY1P25490 414 aa25.2■■□□□ 1.62
SYNC-201ENST00000373484 RGS3P49796 1198 aa25.2■■□□□ 1.62
SYNC-201ENST00000373484 PPIP5K2O43314 1243 aa25.19■■□□□ 1.62
SYNC-201ENST00000373484 KIAA2012Q0VF49 1180 aa25.19■■□□□ 1.62
SYNC-201ENST00000373484 AOC3Q16853 763 aa25.19■■□□□ 1.62
SYNC-201ENST00000373484 LRRC24Q50LG9 513 aa25.19■■□□□ 1.62
SYNC-201ENST00000373484 PNMA6EA0A0J9YXQ4 647 aa25.19■■□□□ 1.62
SYNC-201ENST00000373484 COPRSQ9NQ92 184 aa25.19■■□□□ 1.62
SYNC-201ENST00000373484 WASHC4Q2M389 1173 aa25.18■■□□□ 1.62
SYNC-201ENST00000373484 LARGE2Q8N3Y3 721 aa25.18■■□□□ 1.62
SYNC-201ENST00000373484 EYA3Q99504 573 aa25.18■■□□□ 1.62
SYNC-201ENST00000373484 FBXO3Q9UK99 471 aa25.18■■□□□ 1.62
SYNC-201ENST00000373484 LEMD3Q9Y2U8 911 aa25.18■■□□□ 1.62
SYNC-201ENST00000373484 ATP8B2P98198 1209 aa25.17■■□□□ 1.62
SYNC-201ENST00000373484 GPR101Q96P66 508 aaPredicted RBP25.17■■□□□ 1.62
SYNC-201ENST00000373484 MROH5Q6ZUA9 1318 aa25.17■■□□□ 1.62
SYNC-201ENST00000373484 WTIPA6NIX2 430 aaPredicted RBP25.16■■□□□ 1.62
SYNC-201ENST00000373484 EYA2O00167 538 aa25.16■■□□□ 1.62
SYNC-201ENST00000373484 IGHDP01880 384 aa25.16■■□□□ 1.62
SYNC-201ENST00000373484 HELBQ8NG08 1087 aaPredicted RBP25.16■■□□□ 1.62
SYNC-201ENST00000373484 PA2G4Q9UQ80 394 aaKnown RBP25.16■■□□□ 1.62
SYNC-201ENST00000373484 TAF5LO75529 589 aa25.16■■□□□ 1.62
SYNC-201ENST00000373484 CEP85Q6P2H3 762 aa25.16■■□□□ 1.62
SYNC-201ENST00000373484 SSH3Q8TE77 659 aa25.16■■□□□ 1.62
SYNC-201ENST00000373484 JDP2Q8WYK2 163 aa25.16■■□□□ 1.62
SYNC-201ENST00000373484 CIAO1O76071 339 aa25.15■■□□□ 1.62
SYNC-201ENST00000373484 SLC4A3P48751 1232 aa25.15■■□□□ 1.62
SYNC-201ENST00000373484 POLA2Q14181 598 aa25.15■■□□□ 1.62
SYNC-201ENST00000373484 SIL1Q9H173 461 aa25.15■■□□□ 1.62
SYNC-201ENST00000373484 ZNF804BA4D1E1 1349 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms