RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 RPS12P25398 132 aaKnown RBP20.18■□□□□ 0.82
SSR4-204ENST00000370087 TMPOP42166 694 aaKnown RBP20.18■□□□□ 0.82
SSR4-204ENST00000370087 SF3B3Q15393 1217 aaKnown RBP20.18■□□□□ 0.82
SSR4-204ENST00000370087 RTL5Q5HYW3 569 aaPredicted RBP20.18■□□□□ 0.82
SSR4-204ENST00000370087 DCPSQ96C86 337 aaKnown RBP20.18■□□□□ 0.82
SSR4-204ENST00000370087 PAPPA2Q9BXP8 1791 aa20.17■□□□□ 0.82
SSR4-204ENST00000370087 TBC1D16Q8TBP0 767 aa20.17■□□□□ 0.82
SSR4-204ENST00000370087 CCDC102AQ96A19 550 aa20.17■□□□□ 0.82
SSR4-204ENST00000370087 CDCA5Q96FF9 252 aa20.17■□□□□ 0.82
SSR4-204ENST00000370087 CSRNP1Q96S65 589 aa20.17■□□□□ 0.82
SSR4-204ENST00000370087 PNNQ9H307 717 aaKnown RBP20.17■□□□□ 0.82
SSR4-204ENST00000370087 PLBD2Q8NHP8 589 aa20.16■□□□□ 0.82
SSR4-204ENST00000370087 PCDH10Q9P2E7 1040 aa20.16■□□□□ 0.82
SSR4-204ENST00000370087 RASAL3Q86YV0 1011 aa20.15■□□□□ 0.82
SSR4-204ENST00000370087 SPEF2Q9C093 1822 aa20.14■□□□□ 0.81
SSR4-204ENST00000370087 CHL1O00533 1208 aa20.14■□□□□ 0.81
SSR4-204ENST00000370087 VIL1P09327 827 aaKnown RBP20.14■□□□□ 0.81
SSR4-204ENST00000370087 ZNF609O15014 1411 aa20.13■□□□□ 0.81
SSR4-204ENST00000370087 ANKRD13DQ6ZTN6 518 aa20.13■□□□□ 0.81
SSR4-204ENST00000370087 SULF1Q8IWU6 871 aa20.13■□□□□ 0.81
SSR4-204ENST00000370087 EYA3Q99504 573 aa20.13■□□□□ 0.81
SSR4-204ENST00000370087 SEC31BQ9NQW1 1179 aa20.13■□□□□ 0.81
SSR4-204ENST00000370087 SCAF8Q9UPN6 1271 aaKnown RBP20.13■□□□□ 0.81
SSR4-204ENST00000370087 IRS4O14654 1257 aaPredicted RBP20.12■□□□□ 0.81
SSR4-204ENST00000370087 HDGFL1Q5TGJ6 251 aa20.12■□□□□ 0.81
SSR4-204ENST00000370087 ANGEL2Q5VTE6 544 aaKnown RBP20.12■□□□□ 0.81
SSR4-204ENST00000370087 CCDC146Q8IYE0 955 aa20.12■□□□□ 0.81
SSR4-204ENST00000370087 LAS1LQ9Y4W2 734 aaKnown RBP20.12■□□□□ 0.81
SSR4-204ENST00000370087 UFL1O94874 794 aa20.11■□□□□ 0.81
SSR4-204ENST00000370087 ZNF280AP59817 542 aaPredicted RBP20.11■□□□□ 0.81
SSR4-204ENST00000370087 RPS8P62241 208 aaKnown RBP20.11■□□□□ 0.81
SSR4-204ENST00000370087 LMOD3Q0VAK6 560 aa20.11■□□□□ 0.81
SSR4-204ENST00000370087 NEUROD2Q15784 382 aa20.11■□□□□ 0.81
SSR4-204ENST00000370087 MOB2Q70IA6 237 aa20.11■□□□□ 0.81
SSR4-204ENST00000370087 CTU1Q7Z7A3 348 aaKnown RBP20.11■□□□□ 0.81
SSR4-204ENST00000370087 TRIM35Q9UPQ4 493 aa20.11■□□□□ 0.81
SSR4-204ENST00000370087 SCARF1Q14162 830 aa20.1■□□□□ 0.81
SSR4-204ENST00000370087 PODXL2Q9NZ53 605 aa20.1■□□□□ 0.81
SSR4-204ENST00000370087 RSBN1LQ6PCB5 846 aaPredicted RBP20.09■□□□□ 0.81
SSR4-204ENST00000370087 ZC3H12CQ9C0D7 883 aaKnown RBP20.09■□□□□ 0.81
SSR4-204ENST00000370087 HPS5Q9UPZ3 1129 aa20.09■□□□□ 0.81
SSR4-204ENST00000370087 GMLQ99445 158 aa20.08■□□□□ 0.81
SSR4-204ENST00000370087 TRIM28Q13263 835 aaKnown RBP20.07■□□□□ 0.8
SSR4-204ENST00000370087 JARID2Q92833 1246 aaPredicted RBP20.07■□□□□ 0.8
SSR4-204ENST00000370087 DBF4Q9UBU7 674 aaPredicted RBP20.07■□□□□ 0.8
SSR4-204ENST00000370087 GGA1Q9UJY5 639 aa20.07■□□□□ 0.8
SSR4-204ENST00000370087 WTIPA6NIX2 430 aaPredicted RBP20.06■□□□□ 0.8
SSR4-204ENST00000370087 HOXB7P09629 217 aa20.06■□□□□ 0.8
SSR4-204ENST00000370087 PRAMEF18Q5VWM3 479 aa20.06■□□□□ 0.8
SSR4-204ENST00000370087 CCDC85AQ96PX6 553 aaPredicted RBP20.06■□□□□ 0.8
SSR4-204ENST00000370087 MYOZ2Q9NPC6 264 aa20.06■□□□□ 0.8
SSR4-204ENST00000370087 ANKIB1Q9P2G1 1089 aa20.06■□□□□ 0.8
SSR4-204ENST00000370087 PRPF38BQ5VTL8 546 aaKnown RBP20.05■□□□□ 0.8
SSR4-204ENST00000370087 ZBTB38Q8NAP3 1195 aaPredicted RBP20.05■□□□□ 0.8
SSR4-204ENST00000370087 AGBL3Q8NEM8 1001 aa20.05■□□□□ 0.8
SSR4-204ENST00000370087 HTTP42858 3142 aa20.05■□□□□ 0.8
SSR4-204ENST00000370087 UBE2Q2LH0YL09 131 aa20.04■□□□□ 0.8
SSR4-204ENST00000370087 TBC1D8O95759 1140 aa20.04■□□□□ 0.8
SSR4-204ENST00000370087 DUSP27Q5VZP5 1158 aa20.04■□□□□ 0.8
SSR4-204ENST00000370087 ZNF296Q8WUU4 475 aaPredicted RBP20.04■□□□□ 0.8
SSR4-204ENST00000370087 MXD3Q9BW11 206 aa20.04■□□□□ 0.8
SSR4-204ENST00000370087 PHAXQ9H814 394 aaKnown RBP20.04■□□□□ 0.8
SSR4-204ENST00000370087 HYPKQ9NX55 129 aa20.04■□□□□ 0.8
SSR4-204ENST00000370087 MYH3P11055 1940 aa20.04■□□□□ 0.8
SSR4-204ENST00000370087 PITPNM2Q9BZ72 1349 aa20.03■□□□□ 0.8
SSR4-204ENST00000370087 G3V3G9 751 aa20.03■□□□□ 0.8
SSR4-204ENST00000370087 USP17L8P0C7I0 530 aa20.03■□□□□ 0.8
SSR4-204ENST00000370087 DCAF8Q5TAQ9 597 aa20.03■□□□□ 0.8
SSR4-204ENST00000370087 MYD88Q99836 296 aa20.03■□□□□ 0.8
SSR4-204ENST00000370087 FKBP1BP68106 108 aa20.02■□□□□ 0.8
SSR4-204ENST00000370087 NBPF9Q3BBW0 867 aa20.02■□□□□ 0.8
SSR4-204ENST00000370087 REM2Q8IYK8 340 aaPredicted RBP20.02■□□□□ 0.8
SSR4-204ENST00000370087 MKRN3Q13064 507 aaKnown RBP20.01■□□□□ 0.79
SSR4-204ENST00000370087 RIC3Q7Z5B4 369 aa20.01■□□□□ 0.79
SSR4-204ENST00000370087 MBIPQ9NS73 344 aa20.01■□□□□ 0.79
SSR4-204ENST00000370087 XDHP47989 1333 aa20.01■□□□□ 0.79
SSR4-204ENST00000370087 MKI67P46013 3256 aaKnown RBP20■□□□□ 0.79
SSR4-204ENST00000370087 USP17L3A6NCW0 530 aa20■□□□□ 0.79
SSR4-204ENST00000370087 USP17L4A6NCW7 530 aa20■□□□□ 0.79
SSR4-204ENST00000370087 CCDC152Q4G0S7 254 aa20■□□□□ 0.79
SSR4-204ENST00000370087 USP17L1Q7RTZ2 530 aa20■□□□□ 0.79
SSR4-204ENST00000370087 R3HDMLQ9H3Y0 253 aa20■□□□□ 0.79
SSR4-204ENST00000370087 PCCAP05165 728 aaPredicted RBP19.99■□□□□ 0.79
SSR4-204ENST00000370087 GOLGA2Q08379 1002 aa19.99■□□□□ 0.79
SSR4-204ENST00000370087 RUNDC1Q96C34 613 aa19.99■□□□□ 0.79
SSR4-204ENST00000370087 HDAC9Q9UKV0 1011 aa19.99■□□□□ 0.79
SSR4-204ENST00000370087 LAMB1P07942 1786 aa19.98■□□□□ 0.79
SSR4-204ENST00000370087 CENPFP49454 3210 aa19.98■□□□□ 0.79
SSR4-204ENST00000370087 PDE8AO60658 829 aa19.98■□□□□ 0.79
SSR4-204ENST00000370087 RALBP1Q15311 655 aa19.98■□□□□ 0.79
SSR4-204ENST00000370087 MED23Q9ULK4 1368 aa19.97■□□□□ 0.79
SSR4-204ENST00000370087 GPR25O00155 361 aa19.97■□□□□ 0.79
SSR4-204ENST00000370087 SASH1O94885 1247 aa19.97■□□□□ 0.79
SSR4-204ENST00000370087 ATP2B4P23634 1241 aa19.97■□□□□ 0.79
SSR4-204ENST00000370087 TM4SF4P48230 202 aa19.97■□□□□ 0.79
SSR4-204ENST00000370087 PKN2Q16513 984 aaKnown RBP19.97■□□□□ 0.79
SSR4-204ENST00000370087 DACT2Q5SW24 774 aa19.97■□□□□ 0.79
SSR4-204ENST00000370087 ANKRD18AQ8IVF6 992 aa19.97■□□□□ 0.79
SSR4-204ENST00000370087 CCDC191Q8NCU4 936 aa19.97■□□□□ 0.79
SSR4-204ENST00000370087 ZNF853P0CG23 659 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms