RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 CEP131Q9UPN4 1083 aa9.75□□□□□ -0.85
LCA5-201ENST00000369846 USP16Q9Y5T5 823 aa9.75□□□□□ -0.85
LCA5-201ENST00000369846 TACC1O75410 805 aa9.75□□□□□ -0.85
LCA5-201ENST00000369846 HNRNPH2P55795 449 aaKnown RBP9.75□□□□□ -0.85
LCA5-201ENST00000369846 GOLGA5Q8TBA6 731 aa9.75□□□□□ -0.85
LCA5-201ENST00000369846 BCAS4Q8TDM0 211 aa9.75□□□□□ -0.85
LCA5-201ENST00000369846 DDX27Q96GQ7 796 aaKnown RBP9.75□□□□□ -0.85
LCA5-201ENST00000369846 USH1CQ9Y6N9 552 aa9.75□□□□□ -0.85
LCA5-201ENST00000369846 FKBP4Q02790 459 aaKnown RBP eCLIP9.75□□□□□ -0.85
LCA5-201ENST00000369846 PPP1R9BQ96SB3 815 aa9.75□□□□□ -0.85
LCA5-201ENST00000369846 TRIM4Q9C037 500 aa9.75□□□□□ -0.85
LCA5-201ENST00000369846 NUP153P49790 1475 aaKnown RBP9.74□□□□□ -0.85
LCA5-201ENST00000369846 GRIPAP1Q4V328 841 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 KLHL34Q8N239 644 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 STAC3Q96MF2 364 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 ANKRD65E5RJM6 399 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 TXNDC9O14530 226 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 KIF5AQ12840 1032 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.74□□□□□ -0.85
LCA5-201ENST00000369846 BLMP54132 1417 aaPredicted RBP9.74□□□□□ -0.85
LCA5-201ENST00000369846 KRT86O43790 486 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 SYKP43405 635 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 PPP1R7Q15435 360 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 VSIG1Q86XK7 387 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 TCEANC2Q96MN5 208 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 IRAK4Q9NWZ3 460 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 ANKRD18BA2A2Z9 1011 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 GOLGA6BA6NDN3 693 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 COG7P83436 770 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 N4BP2L2Q92802 583 aaPredicted RBP9.74□□□□□ -0.85
LCA5-201ENST00000369846 ARHGEF2Q92974 986 aaKnown RBP9.74□□□□□ -0.85
LCA5-201ENST00000369846 DDX23Q9BUQ8 820 aaKnown RBP9.74□□□□□ -0.85
LCA5-201ENST00000369846 TRIM7Q9C029 511 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 VCX3BQ9H321 246 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 STK38LQ9Y2H1 464 aa9.74□□□□□ -0.85
LCA5-201ENST00000369846 ZNF445P59923 1031 aa9.73□□□□□ -0.85
LCA5-201ENST00000369846 HDGFL1Q5TGJ6 251 aa9.73□□□□□ -0.85
LCA5-201ENST00000369846 TSHZ3Q63HK5 1081 aa9.73□□□□□ -0.85
LCA5-201ENST00000369846 IQCGQ9H095 443 aaKnown RBP9.73□□□□□ -0.85
LCA5-201ENST00000369846 CTNNA3Q9UI47 895 aa9.73□□□□□ -0.85
LCA5-201ENST00000369846 PCDHB15Q9Y5E8 787 aa9.73□□□□□ -0.85
LCA5-201ENST00000369846 IKBKGQ9Y6K9 419 aa9.73□□□□□ -0.85
LCA5-201ENST00000369846 UHRF1BP1Q6BDS2 1440 aa9.73□□□□□ -0.85
LCA5-201ENST00000369846 GLRX3O76003 335 aaKnown RBP9.73□□□□□ -0.85
LCA5-201ENST00000369846 F13A1P00488 732 aa9.73□□□□□ -0.85
LCA5-201ENST00000369846 HMGB1P09429 215 aaKnown RBP9.73□□□□□ -0.85
LCA5-201ENST00000369846 TMEM132AQ24JP5 1023 aa9.73□□□□□ -0.85
LCA5-201ENST00000369846 LRRC23Q53EV4 343 aaPredicted RBP9.73□□□□□ -0.85
LCA5-201ENST00000369846 CTNNA2P26232 953 aa9.73□□□□□ -0.85
LCA5-201ENST00000369846 GBP1P32455 592 aa9.73□□□□□ -0.85
LCA5-201ENST00000369846 CCT5P48643 541 aa9.73□□□□□ -0.85
LCA5-201ENST00000369846 MAP7Q14244 749 aa9.73□□□□□ -0.85
LCA5-201ENST00000369846 SH2D4BQ5SQS7 431 aa9.73□□□□□ -0.85
LCA5-201ENST00000369846 SOGA3Q5TF21 947 aa9.73□□□□□ -0.85
LCA5-201ENST00000369846 UBLCP1Q8WVY7 318 aaPredicted RBP9.73□□□□□ -0.85
LCA5-201ENST00000369846 ZMAT2Q96NC0 199 aaKnown RBP9.73□□□□□ -0.85
LCA5-201ENST00000369846 E7EVH7 732 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 FGFR1OPO95684 399 aaKnown RBP9.72□□□□□ -0.85
LCA5-201ENST00000369846 CLTAP09496 248 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 GAS2L3Q86XJ1 694 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 WASF1Q92558 559 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 CCDC77Q9BR77 488 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 LRRD1A4D1F6 860 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 MYO1CO00159 1063 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 CCDC25Q86WR0 208 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 ABTB1Q969K4 478 aaPredicted RBP9.72□□□□□ -0.85
LCA5-201ENST00000369846 BOLA2Q9H3K6 86 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 PLB1Q6P1J6 1458 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 ZNF608Q9ULD9 1512 aaPredicted RBP9.72□□□□□ -0.85
LCA5-201ENST00000369846 IQGAP2Q13576 1575 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 HIP1RO75146 1068 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 IDEP14735 1019 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 ALDH3A1P30838 453 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 GNGT1P63211 74 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 TCERG1LQ5VWI1 586 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 RNF10Q8N5U6 811 aaKnown RBP9.72□□□□□ -0.85
LCA5-201ENST00000369846 STAG1Q8WVM7 1258 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 UBA5Q9GZZ9 404 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 PPANQ9NQ55 473 aaKnown RBP9.72□□□□□ -0.85
LCA5-201ENST00000369846 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.72□□□□□ -0.85
LCA5-201ENST00000369846 MRPS27Q92552 414 aaKnown RBP9.72□□□□□ -0.85
LCA5-201ENST00000369846 BAG1Q99933 345 aaPredicted RBP9.72□□□□□ -0.85
LCA5-201ENST00000369846 STMN4Q9H169 189 aaPredicted RBP9.72□□□□□ -0.85
LCA5-201ENST00000369846 ANTXR1Q9H6X2 564 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 ZMYM4Q5VZL5 1548 aa9.72□□□□□ -0.85
LCA5-201ENST00000369846 NPHP3Q7Z494 1330 aa9.71□□□□□ -0.85
LCA5-201ENST00000369846 GPATCH8Q9UKJ3 1502 aaKnown RBP9.71□□□□□ -0.85
LCA5-201ENST00000369846 A6NNZ2 444 aa9.71□□□□□ -0.85
LCA5-201ENST00000369846 CASQ2O14958 399 aaPredicted RBP9.71□□□□□ -0.85
LCA5-201ENST00000369846 TUBB8Q3ZCM7 444 aa9.71□□□□□ -0.85
LCA5-201ENST00000369846 GSDMBQ8TAX9 411 aa9.71□□□□□ -0.85
LCA5-201ENST00000369846 WHAMMQ8TF30 809 aa9.71□□□□□ -0.85
LCA5-201ENST00000369846 U3KPZ7 1027 aaPredicted RBP9.71□□□□□ -0.85
LCA5-201ENST00000369846 PPP1R12BO60237 982 aaPredicted RBP9.71□□□□□ -0.86
LCA5-201ENST00000369846 TRIM27P14373 513 aa9.71□□□□□ -0.86
LCA5-201ENST00000369846 TTC39AQ5SRH9 613 aa9.71□□□□□ -0.86
LCA5-201ENST00000369846 SND1Q7KZF4 910 aaKnown RBP eCLIP9.71□□□□□ -0.86
LCA5-201ENST00000369846 TRIM47Q96LD4 638 aa9.71□□□□□ -0.86
LCA5-201ENST00000369846 NACAP1Q9BZK3 213 aa9.71□□□□□ -0.86
LCA5-201ENST00000369846 KRT13P13646 458 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms