RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 IGHMBP2P38935 993 aaKnown RBP28.26■■■□□ 2.12
ECHDC1-203ENST00000368291 IFIT5Q13325 482 aaKnown RBP28.26■■■□□ 2.12
ECHDC1-203ENST00000368291 ANKRD44Q8N8A2 993 aa28.26■■■□□ 2.12
ECHDC1-203ENST00000368291 RRAGCQ9HB90 399 aa28.26■■■□□ 2.12
ECHDC1-203ENST00000368291 POTECB2RU33 542 aa28.25■■■□□ 2.11
ECHDC1-203ENST00000368291 GPR101Q96P66 508 aaPredicted RBP28.25■■■□□ 2.11
ECHDC1-203ENST00000368291 C6orf229H3BNL8 230 aa28.24■■■□□ 2.11
ECHDC1-203ENST00000368291 ANKIB1Q9P2G1 1089 aa28.24■■■□□ 2.11
ECHDC1-203ENST00000368291 XDHP47989 1333 aa28.24■■■□□ 2.11
ECHDC1-203ENST00000368291 WTIPA6NIX2 430 aaPredicted RBP28.24■■■□□ 2.11
ECHDC1-203ENST00000368291 ZKSCAN2Q63HK3 967 aa28.24■■■□□ 2.11
ECHDC1-203ENST00000368291 NIM1KQ8IY84 436 aa28.24■■■□□ 2.11
ECHDC1-203ENST00000368291 CLUAP1Q96AJ1 413 aa28.24■■■□□ 2.11
ECHDC1-203ENST00000368291 WASHC4Q2M389 1173 aa28.23■■■□□ 2.11
ECHDC1-203ENST00000368291 CCDC57Q2TAC2 916 aa28.23■■■□□ 2.11
ECHDC1-203ENST00000368291 ZNF594Q96JF6 807 aaPredicted RBP28.23■■■□□ 2.11
ECHDC1-203ENST00000368291 MPHOSPH8Q99549 860 aa28.23■■■□□ 2.11
ECHDC1-203ENST00000368291 GGA1Q9UJY5 639 aa28.23■■■□□ 2.11
ECHDC1-203ENST00000368291 SCN4AP35499 1836 aa28.23■■■□□ 2.11
ECHDC1-203ENST00000368291 SCN9AQ15858 1988 aa28.22■■■□□ 2.11
ECHDC1-203ENST00000368291 UFL1O94874 794 aa28.22■■■□□ 2.11
ECHDC1-203ENST00000368291 MEIS3Q99687 375 aa28.22■■■□□ 2.11
ECHDC1-203ENST00000368291 RIMBP2O15034 1052 aa28.21■■■□□ 2.11
ECHDC1-203ENST00000368291 YDJCA8MPS7 323 aa28.2■■■□□ 2.1
ECHDC1-203ENST00000368291 UBTFL1P0CB47 393 aaPredicted RBP28.2■■■□□ 2.1
ECHDC1-203ENST00000368291 L3MBTL3Q96JM7 780 aaPredicted RBP28.2■■■□□ 2.1
ECHDC1-203ENST00000368291 ZNRF3Q9ULT6 936 aa28.2■■■□□ 2.1
ECHDC1-203ENST00000368291 ATP2B4P23634 1241 aa28.19■■■□□ 2.1
ECHDC1-203ENST00000368291 EIF6P56537 245 aaKnown RBP28.19■■■□□ 2.1
ECHDC1-203ENST00000368291 EYA3Q99504 573 aa28.19■■■□□ 2.1
ECHDC1-203ENST00000368291 PSME4Q14997 1843 aa28.18■■■□□ 2.1
ECHDC1-203ENST00000368291 VEGFAP15692 232 aaPredicted RBP28.18■■■□□ 2.1
ECHDC1-203ENST00000368291 CHRNDQ07001 517 aa28.18■■■□□ 2.1
ECHDC1-203ENST00000368291 GPC2Q8N158 579 aa28.18■■■□□ 2.1
ECHDC1-203ENST00000368291 TMEM57Q8N5G2 664 aa28.18■■■□□ 2.1
ECHDC1-203ENST00000368291 CXCL9Q07325 125 aa28.17■■■□□ 2.1
ECHDC1-203ENST00000368291 DBNDD1Q9H9R9 158 aa28.17■■■□□ 2.1
ECHDC1-203ENST00000368291 RLBP1P12271 317 aa28.16■■■□□ 2.1
ECHDC1-203ENST00000368291 LDHAL6AQ6ZMR3 332 aa28.16■■■□□ 2.1
ECHDC1-203ENST00000368291 ZC3H12CQ9C0D7 883 aaKnown RBP28.16■■■□□ 2.1
ECHDC1-203ENST00000368291 C1QTNF8P60827 252 aa28.15■■■□□ 2.1
ECHDC1-203ENST00000368291 TAF7LQ5H9L4 462 aa28.15■■■□□ 2.1
ECHDC1-203ENST00000368291 PUS3Q9BZE2 481 aaKnown RBP28.15■■■□□ 2.1
ECHDC1-203ENST00000368291 ANKRD2Q9GZV1 360 aa28.15■■■□□ 2.1
ECHDC1-203ENST00000368291 RCAN3Q9UKA8 241 aa28.15■■■□□ 2.1
ECHDC1-203ENST00000368291 LRRFIP2Q9Y608 721 aaKnown RBP28.15■■■□□ 2.1
ECHDC1-203ENST00000368291 DOK7Q18PE1 504 aa28.14■■■□□ 2.1
ECHDC1-203ENST00000368291 LEMD3Q9Y2U8 911 aa28.14■■■□□ 2.1
ECHDC1-203ENST00000368291 GJA3Q9Y6H8 435 aa28.14■■■□□ 2.1
ECHDC1-203ENST00000368291 MED23Q9ULK4 1368 aa28.13■■■□□ 2.09
ECHDC1-203ENST00000368291 ECE2O60344 883 aa28.13■■■□□ 2.09
ECHDC1-203ENST00000368291 TOMM70O94826 608 aa28.13■■■□□ 2.09
ECHDC1-203ENST00000368291 RFX5P48382 616 aaPredicted RBP28.13■■■□□ 2.09
ECHDC1-203ENST00000368291 DZIP1LQ8IYY4 767 aaKnown RBP28.13■■■□□ 2.09
ECHDC1-203ENST00000368291 HELBQ8NG08 1087 aaPredicted RBP28.13■■■□□ 2.09
ECHDC1-203ENST00000368291 ZNF646O15015 1829 aaPredicted RBP28.13■■■□□ 2.09
ECHDC1-203ENST00000368291 SNAP23O00161 211 aa28.12■■■□□ 2.09
ECHDC1-203ENST00000368291 TAF5LO75529 589 aa28.12■■■□□ 2.09
ECHDC1-203ENST00000368291 RAD17O75943 681 aa28.12■■■□□ 2.09
ECHDC1-203ENST00000368291 GNAI3P08754 354 aa28.12■■■□□ 2.09
ECHDC1-203ENST00000368291 KLHDC4Q8TBB5 520 aa28.12■■■□□ 2.09
ECHDC1-203ENST00000368291 YTHDC1Q96MU7 727 aaKnown RBP28.12■■■□□ 2.09
ECHDC1-203ENST00000368291 CNNM1Q9NRU3 951 aa28.12■■■□□ 2.09
ECHDC1-203ENST00000368291 RIPOR2Q9Y4F9 1068 aa28.12■■■□□ 2.09
ECHDC1-203ENST00000368291 ZNF804BA4D1E1 1349 aa28.12■■■□□ 2.09
ECHDC1-203ENST00000368291 CIAPIN1Q6FI81 312 aa28.11■■■□□ 2.09
ECHDC1-203ENST00000368291 TXNRD3Q86VQ6 643 aa28.11■■■□□ 2.09
ECHDC1-203ENST00000368291 KCNQ5Q9NR82 932 aa28.11■■■□□ 2.09
ECHDC1-203ENST00000368291 IRS2Q9Y4H2 1338 aa28.11■■■□□ 2.09
ECHDC1-203ENST00000368291 KLRK1P26718 216 aa28.11■■■□□ 2.09
ECHDC1-203ENST00000368291 SCNN1DP51172 638 aa28.11■■■□□ 2.09
ECHDC1-203ENST00000368291 LRRC24Q50LG9 513 aa28.1■■■□□ 2.09
ECHDC1-203ENST00000368291 FTSJ3Q8IY81 847 aaKnown RBP28.1■■■□□ 2.09
ECHDC1-203ENST00000368291 HDAC5Q9UQL6 1122 aa28.1■■■□□ 2.09
ECHDC1-203ENST00000368291 PTPN12Q05209 780 aaKnown RBP28.09■■■□□ 2.09
ECHDC1-203ENST00000368291 C16orf71Q8IYS4 520 aaPredicted RBP28.09■■■□□ 2.09
ECHDC1-203ENST00000368291 TAF1DQ9H5J8 278 aaPredicted RBP28.09■■■□□ 2.09
ECHDC1-203ENST00000368291 IQCA1LA6NCM1 817 aa28.08■■■□□ 2.09
ECHDC1-203ENST00000368291 RBM46Q8TBY0 533 aaKnown RBP28.08■■■□□ 2.09
ECHDC1-203ENST00000368291 HACL1Q9UJ83 578 aa28.08■■■□□ 2.09
ECHDC1-203ENST00000368291 ADAMTSL1Q8N6G6 1762 aa28.07■■■□□ 2.08
ECHDC1-203ENST00000368291 PSMD14O00487 310 aa28.07■■■□□ 2.08
ECHDC1-203ENST00000368291 TNIP1Q15025 636 aa28.07■■■□□ 2.08
ECHDC1-203ENST00000368291 PANK1Q8TE04 598 aa28.07■■■□□ 2.08
ECHDC1-203ENST00000368291 PLIN1O60240 522 aa28.06■■■□□ 2.08
ECHDC1-203ENST00000368291 POTEIP0CG38 1075 aa28.06■■■□□ 2.08
ECHDC1-203ENST00000368291 POTEJP0CG39 1038 aa28.06■■■□□ 2.08
ECHDC1-203ENST00000368291 EPS15P42566 896 aa28.05■■■□□ 2.08
ECHDC1-203ENST00000368291 KCNJ4P48050 445 aa28.05■■■□□ 2.08
ECHDC1-203ENST00000368291 C15orf52Q6ZUT6 534 aaKnown RBP28.05■■■□□ 2.08
ECHDC1-203ENST00000368291 G3V3G9 751 aa28.04■■■□□ 2.08
ECHDC1-203ENST00000368291 ZBTB7BO15156 539 aaPredicted RBP28.04■■■□□ 2.08
ECHDC1-203ENST00000368291 GNAI2P04899 355 aa28.04■■■□□ 2.08
ECHDC1-203ENST00000368291 EPHX2P34913 555 aa28.04■■■□□ 2.08
ECHDC1-203ENST00000368291 GMPSP49915 693 aaPredicted RBP28.04■■■□□ 2.08
ECHDC1-203ENST00000368291 MTX1Q13505 466 aa28.04■■■□□ 2.08
ECHDC1-203ENST00000368291 DCAF8Q5TAQ9 597 aa28.04■■■□□ 2.08
ECHDC1-203ENST00000368291 PODNQ7Z5L7 613 aa28.04■■■□□ 2.08
ECHDC1-203ENST00000368291 ITPRIPQ8IWB1 547 aa28.04■■■□□ 2.08
ECHDC1-203ENST00000368291 GPRC5DQ9NZD1 345 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms