RNA–Protein interactions for RNA: ENST00000368273.8

PMF1-201, Transcript of polyamine modulated factor 1, humanhuman

TSL 2 BASIC

Gene PMF1, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-201ENST00000368273 SMC5Q8IY18 1101 aa16.44■□□□□ 0.22
PMF1-201ENST00000368273 MPNDQ8N594 471 aa16.44■□□□□ 0.22
PMF1-201ENST00000368273 RTFDC1Q9BY42 306 aaPredicted RBP16.44■□□□□ 0.22
PMF1-201ENST00000368273 C9orf78Q9NZ63 289 aaPredicted RBP16.44■□□□□ 0.22
PMF1-201ENST00000368273 CSF1RP07333 972 aa16.43■□□□□ 0.22
PMF1-201ENST00000368273 DPP8Q6V1X1 898 aaPredicted RBP16.43■□□□□ 0.22
PMF1-201ENST00000368273 GREM2Q9H772 168 aa16.43■□□□□ 0.22
PMF1-201ENST00000368273 GLTPD2A6NH11 291 aa16.42■□□□□ 0.22
PMF1-201ENST00000368273 FOXO4P98177 505 aa16.42■□□□□ 0.22
PMF1-201ENST00000368273 ANKRD18AQ8IVF6 992 aa16.42■□□□□ 0.22
PMF1-201ENST00000368273 SUPT20HQ8NEM7 779 aa16.42■□□□□ 0.22
PMF1-201ENST00000368273 GCC1Q96CN9 775 aa16.42■□□□□ 0.22
PMF1-201ENST00000368273 CDC5LQ99459 802 aaKnown RBP16.42■□□□□ 0.22
PMF1-201ENST00000368273 VPS33BQ9H267 617 aa16.42■□□□□ 0.22
PMF1-201ENST00000368273 LRRFIP2Q9Y608 721 aaKnown RBP16.42■□□□□ 0.22
PMF1-201ENST00000368273 UTYO14607 1347 aa16.42■□□□□ 0.22
PMF1-201ENST00000368273 HMMRO75330 724 aa16.41■□□□□ 0.22
PMF1-201ENST00000368273 DPY19L2Q6NUT2 758 aa16.41■□□□□ 0.22
PMF1-201ENST00000368273 HDAC5Q9UQL6 1122 aa16.41■□□□□ 0.22
PMF1-201ENST00000368273 NBPF7P0C2Y1 421 aaPredicted RBP16.4■□□□□ 0.22
PMF1-201ENST00000368273 GPSM2P81274 684 aa16.4■□□□□ 0.22
PMF1-201ENST00000368273 ATP8B2P98198 1209 aa16.4■□□□□ 0.22
PMF1-201ENST00000368273 FAM161AQ3B820 660 aa16.4■□□□□ 0.22
PMF1-201ENST00000368273 EPHA10Q5JZY3 1008 aa16.4■□□□□ 0.22
PMF1-201ENST00000368273 SKAP1Q86WV1 359 aa16.4■□□□□ 0.22
PMF1-201ENST00000368273 LARGE2Q8N3Y3 721 aa16.4■□□□□ 0.22
PMF1-201ENST00000368273 JDP2Q8WYK2 163 aa16.4■□□□□ 0.22
PMF1-201ENST00000368273 DCTPP1Q9H773 170 aa16.4■□□□□ 0.22
PMF1-201ENST00000368273 NMRK2Q9NPI5 230 aa16.4■□□□□ 0.22
PMF1-201ENST00000368273 NSFL1CQ9UNZ2 370 aaKnown RBP16.4■□□□□ 0.22
PMF1-201ENST00000368273 DUOX1Q9NRD9 1551 aa16.39■□□□□ 0.21
PMF1-201ENST00000368273 FZD9O00144 591 aa16.39■□□□□ 0.21
PMF1-201ENST00000368273 KIF3CO14782 793 aa16.39■□□□□ 0.21
PMF1-201ENST00000368273 PPIP5K2O43314 1243 aa16.39■□□□□ 0.21
PMF1-201ENST00000368273 ITGA6P23229 1130 aa16.39■□□□□ 0.21
PMF1-201ENST00000368273 BSDC1Q9NW68 430 aaPredicted RBP16.39■□□□□ 0.21
PMF1-201ENST00000368273 COL4A5P29400 1685 aa16.39■□□□□ 0.21
PMF1-201ENST00000368273 NUCB1Q02818 461 aa16.38■□□□□ 0.21
PMF1-201ENST00000368273 AOC3Q16853 763 aa16.38■□□□□ 0.21
PMF1-201ENST00000368273 LMBR1LQ6UX01 489 aa16.38■□□□□ 0.21
PMF1-201ENST00000368273 SUCLG2Q96I99 432 aa16.38■□□□□ 0.21
PMF1-201ENST00000368273 PODXL2Q9NZ53 605 aa16.38■□□□□ 0.21
PMF1-201ENST00000368273 LTBP1Q14766 1721 aa16.38■□□□□ 0.21
PMF1-201ENST00000368273 ANKRD18BA2A2Z9 1011 aa16.37■□□□□ 0.21
PMF1-201ENST00000368273 IGHMBP2P38935 993 aaKnown RBP16.37■□□□□ 0.21
PMF1-201ENST00000368273 KIAA2012Q0VF49 1180 aa16.37■□□□□ 0.21
PMF1-201ENST00000368273 IFIT5Q13325 482 aaKnown RBP16.37■□□□□ 0.21
PMF1-201ENST00000368273 NIM1KQ8IY84 436 aa16.37■□□□□ 0.21
PMF1-201ENST00000368273 TBC1D16Q8TBP0 767 aa16.37■□□□□ 0.21
PMF1-201ENST00000368273 KAZALD1Q96I82 304 aa16.37■□□□□ 0.21
PMF1-201ENST00000368273 RRAGCQ9HB90 399 aa16.37■□□□□ 0.21
PMF1-201ENST00000368273 ANKIB1Q9P2G1 1089 aa16.37■□□□□ 0.21
PMF1-201ENST00000368273 POLLQ9UGP5 575 aa16.37■□□□□ 0.21
PMF1-201ENST00000368273 ZNF541Q9H0D2 1346 aa16.37■□□□□ 0.21
PMF1-201ENST00000368273 SPEF2Q9C093 1822 aa16.36■□□□□ 0.21
PMF1-201ENST00000368273 C6orf229H3BNL8 230 aa16.36■□□□□ 0.21
PMF1-201ENST00000368273 DDNO94850 711 aaPredicted RBP16.36■□□□□ 0.21
PMF1-201ENST00000368273 WASHC4Q2M389 1173 aa16.36■□□□□ 0.21
PMF1-201ENST00000368273 MINPP1Q9UNW1 487 aa16.36■□□□□ 0.21
PMF1-201ENST00000368273 CHMP3Q9Y3E7 222 aa16.36■□□□□ 0.21
PMF1-201ENST00000368273 XDHP47989 1333 aa16.36■□□□□ 0.21
PMF1-201ENST00000368273 WDR90Q96KV7 1748 aa16.36■□□□□ 0.21
PMF1-201ENST00000368273 RGS3P49796 1198 aa16.35■□□□□ 0.21
PMF1-201ENST00000368273 EIF6P56537 245 aaKnown RBP16.35■□□□□ 0.21
PMF1-201ENST00000368273 MTX1Q13505 466 aa16.35■□□□□ 0.21
PMF1-201ENST00000368273 POLA2Q14181 598 aa16.35■□□□□ 0.21
PMF1-201ENST00000368273 SSH3Q8TE77 659 aa16.35■□□□□ 0.21
PMF1-201ENST00000368273 EYA3Q99504 573 aa16.35■□□□□ 0.21
PMF1-201ENST00000368273 MPHOSPH8Q99549 860 aa16.35■□□□□ 0.21
PMF1-201ENST00000368273 GGA1Q9UJY5 639 aa16.35■□□□□ 0.21
PMF1-201ENST00000368273 ZNRF3Q9ULT6 936 aa16.35■□□□□ 0.21
PMF1-201ENST00000368273 PNMA6EA0A0J9YXQ4 647 aa16.34■□□□□ 0.21
PMF1-201ENST00000368273 POTECB2RU33 542 aa16.34■□□□□ 0.21
PMF1-201ENST00000368273 UFL1O94874 794 aa16.34■□□□□ 0.21
PMF1-201ENST00000368273 VEGFAP15692 232 aaPredicted RBP16.34■□□□□ 0.21
PMF1-201ENST00000368273 CCDC57Q2TAC2 916 aa16.34■□□□□ 0.21
PMF1-201ENST00000368273 RABL6Q3YEC7 729 aaPredicted RBP16.34■□□□□ 0.21
PMF1-201ENST00000368273 CHD1LQ86WJ1 897 aa16.34■□□□□ 0.21
PMF1-201ENST00000368273 L3MBTL3Q96JM7 780 aaPredicted RBP16.34■□□□□ 0.21
PMF1-201ENST00000368273 BICC1Q9H694 974 aaKnown RBP16.34■□□□□ 0.21
PMF1-201ENST00000368273 ATP2B4P23634 1241 aa16.33■□□□□ 0.2
PMF1-201ENST00000368273 C1QTNF8P60827 252 aa16.33■□□□□ 0.2
PMF1-201ENST00000368273 ANKRD45Q5TZF3 282 aa16.33■□□□□ 0.2
PMF1-201ENST00000368273 GPC2Q8N158 579 aa16.33■□□□□ 0.2
PMF1-201ENST00000368273 RIMBP2O15034 1052 aa16.32■□□□□ 0.2
PMF1-201ENST00000368273 TOMM70O94826 608 aa16.32■□□□□ 0.2
PMF1-201ENST00000368273 PDE4AP27815 886 aa16.32■□□□□ 0.2
PMF1-201ENST00000368273 GPR101Q96P66 508 aaPredicted RBP16.32■□□□□ 0.2
PMF1-201ENST00000368273 ZC3H12CQ9C0D7 883 aaKnown RBP16.32■□□□□ 0.2
PMF1-201ENST00000368273 ANKRD2Q9GZV1 360 aa16.32■□□□□ 0.2
PMF1-201ENST00000368273 SRGAP3O43295 1099 aa16.31■□□□□ 0.2
PMF1-201ENST00000368273 CXCL9Q07325 125 aa16.31■□□□□ 0.2
PMF1-201ENST00000368273 TAF7LQ5H9L4 462 aa16.31■□□□□ 0.2
PMF1-201ENST00000368273 C16orf71Q8IYS4 520 aaPredicted RBP16.31■□□□□ 0.2
PMF1-201ENST00000368273 ZNF594Q96JF6 807 aaPredicted RBP16.31■□□□□ 0.2
PMF1-201ENST00000368273 LNPKQ9C0E8 428 aa16.31■□□□□ 0.2
PMF1-201ENST00000368273 IQCA1LA6NCM1 817 aa16.3■□□□□ 0.2
PMF1-201ENST00000368273 CHRNDQ07001 517 aa16.3■□□□□ 0.2
PMF1-201ENST00000368273 LDHAL6AQ6ZMR3 332 aa16.3■□□□□ 0.2
PMF1-201ENST00000368273 TSHZ2Q9NRE2 1034 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms