RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 RNF40O75150 1001 aa9.71□□□□□ -0.85
CD46-209ENST00000367047 GCFC2P16383 781 aaKnown RBP9.71□□□□□ -0.85
CD46-209ENST00000367047 PDE6BP35913 854 aa9.71□□□□□ -0.85
CD46-209ENST00000367047 CHMP4BP1P59074 171 aa9.71□□□□□ -0.85
CD46-209ENST00000367047 STAG1Q8WVM7 1258 aa9.71□□□□□ -0.85
CD46-209ENST00000367047 BORCS6Q96GS4 357 aa9.71□□□□□ -0.85
CD46-209ENST00000367047 MBIPQ9NS73 344 aa9.71□□□□□ -0.85
CD46-209ENST00000367047 SPG7Q9UQ90 795 aa9.71□□□□□ -0.85
CD46-209ENST00000367047 SKAP2O75563 359 aaPredicted RBP9.71□□□□□ -0.85
CD46-209ENST00000367047 WDHD1O75717 1129 aaPredicted RBP9.71□□□□□ -0.85
CD46-209ENST00000367047 CCNHP51946 323 aaPredicted RBP9.71□□□□□ -0.85
CD46-209ENST00000367047 ZKSCAN4Q969J2 545 aaPredicted RBP9.71□□□□□ -0.85
CD46-209ENST00000367047 JAKMIP1Q96N16 626 aaKnown RBP9.71□□□□□ -0.85
CD46-209ENST00000367047 CENPHQ9H3R5 247 aa9.71□□□□□ -0.85
CD46-209ENST00000367047 SENP3Q9H4L4 574 aaPredicted RBP9.71□□□□□ -0.85
CD46-209ENST00000367047 MCM8Q9UJA3 840 aa9.71□□□□□ -0.85
CD46-209ENST00000367047 SYNJ2O15056 1496 aa9.71□□□□□ -0.86
CD46-209ENST00000367047 VWA3AA6NCI4 1184 aa9.71□□□□□ -0.86
CD46-209ENST00000367047 IRX1P78414 480 aaPredicted RBP9.71□□□□□ -0.86
CD46-209ENST00000367047 TBC1D8BQ0IIM8 1120 aa9.71□□□□□ -0.86
CD46-209ENST00000367047 NBPF10Q6P3W6 841 aaKnown RBP9.71□□□□□ -0.86
CD46-209ENST00000367047 NAT10Q9H0A0 1025 aaKnown RBP9.71□□□□□ -0.86
CD46-209ENST00000367047 IRAK4Q9NWZ3 460 aa9.71□□□□□ -0.86
CD46-209ENST00000367047 KDM5AP29375 1690 aaKnown RBP9.71□□□□□ -0.86
CD46-209ENST00000367047 ZSCAN12O43309 604 aa9.7□□□□□ -0.86
CD46-209ENST00000367047 KCNJ6P48051 423 aa9.7□□□□□ -0.86
CD46-209ENST00000367047 ST3GAL1Q11201 340 aa9.7□□□□□ -0.86
CD46-209ENST00000367047 NBPF9Q3BBW0 867 aa9.7□□□□□ -0.86
CD46-209ENST00000367047 LARP1Q6PKG0 1096 aaKnown RBP9.7□□□□□ -0.86
CD46-209ENST00000367047 CCDC12Q8WUD4 166 aaPredicted RBP9.7□□□□□ -0.86
CD46-209ENST00000367047 GGNBP2Q9H3C7 697 aa9.7□□□□□ -0.86
CD46-209ENST00000367047 ANKZF1Q9H8Y5 726 aa9.7□□□□□ -0.86
CD46-209ENST00000367047 ATP10DQ9P241 1426 aa9.7□□□□□ -0.86
CD46-209ENST00000367047 ERCC3P19447 782 aa9.7□□□□□ -0.86
CD46-209ENST00000367047 PRKAR2BP31323 418 aa9.7□□□□□ -0.86
CD46-209ENST00000367047 PSME1Q06323 249 aa9.7□□□□□ -0.86
CD46-209ENST00000367047 ACTN3Q08043 901 aaPredicted RBP9.7□□□□□ -0.86
CD46-209ENST00000367047 ADCK5Q3MIX3 580 aa9.7□□□□□ -0.86
CD46-209ENST00000367047 CEP57Q86XR8 500 aa9.7□□□□□ -0.86
CD46-209ENST00000367047 POTEDQ86YR6 584 aa9.7□□□□□ -0.86
CD46-209ENST00000367047 CCAR1Q8IX12 1150 aaKnown RBP9.7□□□□□ -0.86
CD46-209ENST00000367047 SMARCC1Q92922 1105 aaPredicted RBP9.7□□□□□ -0.86
CD46-209ENST00000367047 TACO1Q9BSH4 297 aaKnown RBP9.7□□□□□ -0.86
CD46-209ENST00000367047 PPP2R2CQ9Y2T4 447 aa9.7□□□□□ -0.86
CD46-209ENST00000367047 CCDC9Q9Y3X0 531 aaKnown RBP9.7□□□□□ -0.86
CD46-209ENST00000367047 ADGRL1O94910 1474 aa9.7□□□□□ -0.86
CD46-209ENST00000367047 KINO60870 393 aaKnown RBP9.69□□□□□ -0.86
CD46-209ENST00000367047 CAND2O75155 1236 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 RBM5P52756 815 aaKnown RBP eCLIP9.69□□□□□ -0.864e-21■■■■□ 19.4
CD46-209ENST00000367047 AP1ARQ63HQ0 302 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 SLC4A10Q6U841 1118 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 HNRNPLLQ8WVV9 542 aaKnown RBP9.69□□□□□ -0.86
CD46-209ENST00000367047 IL17RAQ96F46 866 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 LRRCC1Q9C099 1032 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 EHD4Q9H223 541 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 SH2B1Q9NRF2 756 aaPredicted RBP9.69□□□□□ -0.86
CD46-209ENST00000367047 SAMM50Q9Y512 469 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 MYOM2P54296 1465 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 PTPRTO14522 1441 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 YTHDC2Q9H6S0 1430 aaKnown RBP9.69□□□□□ -0.86
CD46-209ENST00000367047 LRRIQ3A6PVS8 624 aaPredicted RBP9.69□□□□□ -0.86
CD46-209ENST00000367047 CHUKO15111 745 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 PDCP20941 246 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 LMOD1P29536 600 aaPredicted RBP9.69□□□□□ -0.86
CD46-209ENST00000367047 CLNS1AP54105 237 aaKnown RBP9.69□□□□□ -0.86
CD46-209ENST00000367047 KARSQ15046 597 aaKnown RBP9.69□□□□□ -0.86
CD46-209ENST00000367047 RIN2Q8WYP3 895 aaPredicted RBP9.69□□□□□ -0.86
CD46-209ENST00000367047 ZSCAN31Q96LW9 406 aaPredicted RBP9.69□□□□□ -0.86
CD46-209ENST00000367047 A1CFQ9NQ94 594 aaKnown RBP9.69□□□□□ -0.86
CD46-209ENST00000367047 PPP6R1Q9UPN7 881 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 MYO5CQ9NQX4 1742 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 SSH2Q76I76 1423 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 CROCC2H7BZ55 1655 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 PPRC1Q5VV67 1664 aaKnown RBP9.69□□□□□ -0.86
CD46-209ENST00000367047 DIAPH1O60610 1272 aaKnown RBP9.69□□□□□ -0.86
CD46-209ENST00000367047 IQCA1Q86XH1 822 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 BCAS4Q8TDM0 211 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 SDF4Q9BRK5 362 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 IRX2Q9BZI1 471 aaPredicted RBP9.69□□□□□ -0.86
CD46-209ENST00000367047 CYP46A1Q9Y6A2 500 aa9.69□□□□□ -0.86
CD46-209ENST00000367047 EME2A4GXA9 379 aaPredicted RBP9.68□□□□□ -0.86
CD46-209ENST00000367047 PLEKHD1A6NEE1 506 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 BIN1O00499 593 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 CTAGE5O15320 804 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 ARID4AP29374 1257 aaPredicted RBP9.68□□□□□ -0.86
CD46-209ENST00000367047 VSNL1P62760 191 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 STK3Q13188 491 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 ZKSCAN8Q15776 578 aaPredicted RBP9.68□□□□□ -0.86
CD46-209ENST00000367047 CCDC73Q6ZRK6 1079 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 NBPF5PQ86XG9 351 aaPredicted RBP9.68□□□□□ -0.86
CD46-209ENST00000367047 TCEANC2Q96MN5 208 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 TERF2IPQ9NYB0 399 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 CPSF2Q9P2I0 782 aaKnown RBP9.68□□□□□ -0.86
CD46-209ENST00000367047 TPCN1Q9ULQ1 816 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 CEP152O94986 1710 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 HMOX1P09601 288 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 GCKP35557 465 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 PEX19P40855 299 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 NAA25Q14CX7 972 aa9.68□□□□□ -0.86
CD46-209ENST00000367047 IGSF22Q8N9C0 903 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms