RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 CIZ1Q9ULV3 898 aaPredicted RBP13.19□□□□□ -0.3
H3F3A-202ENST00000366814 ANAPC15P60006 121 aa13.19□□□□□ -0.3
H3F3A-202ENST00000366814 TBC1D9BQ66K14 1250 aa13.19□□□□□ -0.3
H3F3A-202ENST00000366814 SIL1Q9H173 461 aa13.19□□□□□ -0.3
H3F3A-202ENST00000366814 C10orf71Q711Q0 1435 aa13.18□□□□□ -0.3
H3F3A-202ENST00000366814 HIP1O00291 1037 aa13.18□□□□□ -0.3
H3F3A-202ENST00000366814 SASH1O94885 1247 aa13.18□□□□□ -0.3
H3F3A-202ENST00000366814 KIAA1211Q6ZU35 1233 aa13.18□□□□□ -0.3
H3F3A-202ENST00000366814 ZBTB3Q9H5J0 574 aa13.18□□□□□ -0.3
H3F3A-202ENST00000366814 DIAPH3Q9NSV4 1193 aa13.18□□□□□ -0.3
H3F3A-202ENST00000366814 H7C1W4 665 aa13.17□□□□□ -0.3
H3F3A-202ENST00000366814 RGL2O15211 777 aa13.17□□□□□ -0.3
H3F3A-202ENST00000366814 FRAT2O75474 233 aaPredicted RBP13.17□□□□□ -0.3
H3F3A-202ENST00000366814 CAMTA2O94983 1202 aa13.17□□□□□ -0.3
H3F3A-202ENST00000366814 EPHA10Q5JZY3 1008 aa13.17□□□□□ -0.3
H3F3A-202ENST00000366814 EVI5LQ96CN4 794 aa13.17□□□□□ -0.3
H3F3A-202ENST00000366814 SETDB2Q96T68 719 aa13.17□□□□□ -0.3
H3F3A-202ENST00000366814 BCS1LQ9Y276 419 aa13.17□□□□□ -0.3
H3F3A-202ENST00000366814 NPHP1O15259 732 aa13.16□□□□□ -0.3
H3F3A-202ENST00000366814 MAP4K4O95819 1239 aaPredicted RBP13.16□□□□□ -0.3
H3F3A-202ENST00000366814 CASP7P55210 303 aa13.16□□□□□ -0.3
H3F3A-202ENST00000366814 CHMP3Q9Y3E7 222 aa13.16□□□□□ -0.3
H3F3A-202ENST00000366814 MCM2P49736 904 aa13.16□□□□□ -0.3
H3F3A-202ENST00000366814 HSP90AB3PQ58FF7 597 aa13.16□□□□□ -0.3
H3F3A-202ENST00000366814 PIM2Q9P1W9 311 aa13.16□□□□□ -0.3
H3F3A-202ENST00000366814 ZNF652Q9Y2D9 606 aa13.16□□□□□ -0.3
H3F3A-202ENST00000366814 CHRNA5P30532 468 aa13.15□□□□□ -0.3
H3F3A-202ENST00000366814 PTPN12Q05209 780 aaKnown RBP13.15□□□□□ -0.3
H3F3A-202ENST00000366814 TCIRG1Q13488 830 aa13.15□□□□□ -0.3
H3F3A-202ENST00000366814 LMBR1LQ6UX01 489 aa13.15□□□□□ -0.3
H3F3A-202ENST00000366814 CLEC4GQ6UXB4 293 aa13.15□□□□□ -0.3
H3F3A-202ENST00000366814 EAF2Q96CJ1 260 aaPredicted RBP13.15□□□□□ -0.3
H3F3A-202ENST00000366814 KIAA1551Q9HCM1 1747 aa13.15□□□□□ -0.3
H3F3A-202ENST00000366814 SGSM2O43147 1006 aa13.14□□□□□ -0.31
H3F3A-202ENST00000366814 KCNA3P22001 575 aa13.14□□□□□ -0.31
H3F3A-202ENST00000366814 RFX5P48382 616 aaPredicted RBP13.14□□□□□ -0.31
H3F3A-202ENST00000366814 KLHDC4Q8TBB5 520 aa13.14□□□□□ -0.31
H3F3A-202ENST00000366814 JARID2Q92833 1246 aaPredicted RBP13.14□□□□□ -0.31
H3F3A-202ENST00000366814 SCN7AQ01118 1682 aa13.14□□□□□ -0.31
H3F3A-202ENST00000366814 DEKP35659 375 aaKnown RBP13.14□□□□□ -0.31
H3F3A-202ENST00000366814 TRIM28Q13263 835 aaKnown RBP13.14□□□□□ -0.31
H3F3A-202ENST00000366814 ISCA1Q9BUE6 129 aa13.14□□□□□ -0.31
H3F3A-202ENST00000366814 CCDC8Q9H0W5 538 aaPredicted RBP13.14□□□□□ -0.31
H3F3A-202ENST00000366814 CARMIL3Q8ND23 1372 aa13.13□□□□□ -0.31
H3F3A-202ENST00000366814 UTRNP46939 3433 aa13.13□□□□□ -0.31
H3F3A-202ENST00000366814 MAP3K15Q6ZN16 1313 aa13.13□□□□□ -0.31
H3F3A-202ENST00000366814 CD2BP2O95400 341 aaKnown RBP13.13□□□□□ -0.31
H3F3A-202ENST00000366814 FOXO4P98177 505 aa13.13□□□□□ -0.31
H3F3A-202ENST00000366814 TNNI3KQ59H18 835 aa13.13□□□□□ -0.31
H3F3A-202ENST00000366814 DALRD3Q5D0E6 543 aaKnown RBP13.13□□□□□ -0.31
H3F3A-202ENST00000366814 ARHGAP27Q6ZUM4 889 aa13.13□□□□□ -0.31
H3F3A-202ENST00000366814 CCDC24Q8N4L8 307 aa13.13□□□□□ -0.31
H3F3A-202ENST00000366814 FPGT-TNNI3KV9GXZ4 949 aa13.13□□□□□ -0.31
H3F3A-202ENST00000366814 BCORQ6W2J9 1755 aa13.13□□□□□ -0.31
H3F3A-202ENST00000366814 NRXN2Q9P2S2 1712 aa13.13□□□□□ -0.31
H3F3A-202ENST00000366814 RAD50Q92878 1312 aa13.13□□□□□ -0.31
H3F3A-202ENST00000366814 H0YIN7 160 aa13.12□□□□□ -0.31
H3F3A-202ENST00000366814 CWC27Q6UX04 472 aaKnown RBP13.12□□□□□ -0.31
H3F3A-202ENST00000366814 ZNF784Q8NCA9 323 aaPredicted RBP13.12□□□□□ -0.31
H3F3A-202ENST00000366814 NIP7Q9Y221 180 aaKnown RBP eCLIP13.12□□□□□ -0.31
H3F3A-202ENST00000366814 GOLGB1Q14789 3259 aaKnown RBP13.12□□□□□ -0.31
H3F3A-202ENST00000366814 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
H3F3A-202ENST00000366814 DDIT3P35638 169 aa13.12□□□□□ -0.31
H3F3A-202ENST00000366814 IL15P40933 162 aaPredicted RBP13.12□□□□□ -0.31
H3F3A-202ENST00000366814 NEK4P51957 841 aa13.12□□□□□ -0.31
H3F3A-202ENST00000366814 TFCP2Q12800 502 aa13.12□□□□□ -0.31
H3F3A-202ENST00000366814 HLFQ16534 295 aa13.12□□□□□ -0.31
H3F3A-202ENST00000366814 PRR5LQ6MZQ0 368 aa13.12□□□□□ -0.31
H3F3A-202ENST00000366814 GIGYF2Q6Y7W6 1299 aaKnown RBP13.12□□□□□ -0.31
H3F3A-202ENST00000366814 NBPF5PQ86XG9 351 aaPredicted RBP13.12□□□□□ -0.31
H3F3A-202ENST00000366814 C2CD5Q86YS7 1000 aa13.12□□□□□ -0.31
H3F3A-202ENST00000366814 CNBD1Q8NA66 436 aa13.12□□□□□ -0.31
H3F3A-202ENST00000366814 GBP4Q96PP9 640 aa13.12□□□□□ -0.31
H3F3A-202ENST00000366814 FAM177BA6PVY3 158 aa13.11□□□□□ -0.31
H3F3A-202ENST00000366814 PCCAP05165 728 aaPredicted RBP13.11□□□□□ -0.31
H3F3A-202ENST00000366814 HSPA4P34932 840 aa13.11□□□□□ -0.31
H3F3A-202ENST00000366814 PDE6BP35913 854 aa13.11□□□□□ -0.31
H3F3A-202ENST00000366814 ST5P78524 1137 aa13.11□□□□□ -0.31
H3F3A-202ENST00000366814 IL17RAQ96F46 866 aa13.11□□□□□ -0.31
H3F3A-202ENST00000366814 FSD1Q9BTV5 496 aa13.11□□□□□ -0.31
H3F3A-202ENST00000366814 BRIP1Q9BX63 1249 aa13.11□□□□□ -0.31
H3F3A-202ENST00000366814 CWC22Q9HCG8 908 aaKnown RBP13.11□□□□□ -0.31
H3F3A-202ENST00000366814 GPR108Q9NPR9 543 aa13.11□□□□□ -0.31
H3F3A-202ENST00000366814 ANKRD36CQ5JPF3 1778 aa13.11□□□□□ -0.31
H3F3A-202ENST00000366814 DDX11L8A8MPP1 907 aa13.1□□□□□ -0.31
H3F3A-202ENST00000366814 ERVV-1B6SEH8 477 aa13.1□□□□□ -0.31
H3F3A-202ENST00000366814 ATP5JP18859 108 aa13.1□□□□□ -0.31
H3F3A-202ENST00000366814 PTMSP20962 102 aa13.1□□□□□ -0.31
H3F3A-202ENST00000366814 CCDC57Q2TAC2 916 aa13.1□□□□□ -0.31
H3F3A-202ENST00000366814 TPTE2Q6XPS3 522 aa13.1□□□□□ -0.31
H3F3A-202ENST00000366814 REM2Q8IYK8 340 aaPredicted RBP13.1□□□□□ -0.31
H3F3A-202ENST00000366814 NUP98P52948 1817 aa13.1□□□□□ -0.31
H3F3A-202ENST00000366814 CIAO1O76071 339 aa13.1□□□□□ -0.31
H3F3A-202ENST00000366814 GTF2E1P29083 439 aaPredicted RBP13.1□□□□□ -0.31
H3F3A-202ENST00000366814 ZBTB38Q8NAP3 1195 aaPredicted RBP13.1□□□□□ -0.31
H3F3A-202ENST00000366814 SPDYE1Q8NFV5 336 aaPredicted RBP13.1□□□□□ -0.31
H3F3A-202ENST00000366814 ZNF622Q969S3 477 aaKnown RBP eCLIP13.1□□□□□ -0.31
H3F3A-202ENST00000366814 PLA2G12BQ9BX93 195 aa13.1□□□□□ -0.31
H3F3A-202ENST00000366814 BOLA2Q9H3K6 86 aa13.1□□□□□ -0.31
H3F3A-202ENST00000366814 TLR7Q9NYK1 1049 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms