RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 CAMTA2O94983 1202 aa8.5□□□□□ -1.05
CCDC196-201ENST00000359454 IL17REQ8NFR9 667 aa8.5□□□□□ -1.05
CCDC196-201ENST00000359454 AIDAQ96BJ3 306 aa8.5□□□□□ -1.05
CCDC196-201ENST00000359454 PASKQ96RG2 1323 aa8.5□□□□□ -1.05
CCDC196-201ENST00000359454 TMEM88BA6NKF7 163 aa8.49□□□□□ -1.05
CCDC196-201ENST00000359454 BHMG1C9JSJ3 638 aaPredicted RBP8.49□□□□□ -1.05
CCDC196-201ENST00000359454 A1BGP04217 495 aa8.49□□□□□ -1.05
CCDC196-201ENST00000359454 CTCFP49711 727 aaPredicted RBP8.49□□□□□ -1.05
CCDC196-201ENST00000359454 CCDC93Q567U6 631 aa8.49□□□□□ -1.05
CCDC196-201ENST00000359454 LAPTM4BQ86VI4 370 aa8.49□□□□□ -1.05
CCDC196-201ENST00000359454 DZIP3Q86Y13 1208 aaKnown RBP8.49□□□□□ -1.05
CCDC196-201ENST00000359454 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
CCDC196-201ENST00000359454 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
CCDC196-201ENST00000359454 TAF1DQ9H5J8 278 aaPredicted RBP8.49□□□□□ -1.05
CCDC196-201ENST00000359454 TMEM134Q9H6X4 195 aa8.49□□□□□ -1.05
CCDC196-201ENST00000359454 SLX4Q8IY92 1834 aa8.48□□□□□ -1.05
CCDC196-201ENST00000359454 ITGBL1O95965 494 aaPredicted RBP8.48□□□□□ -1.05
CCDC196-201ENST00000359454 NPR1P16066 1061 aa8.48□□□□□ -1.05
CCDC196-201ENST00000359454 VEGFBP49765 207 aa8.48□□□□□ -1.05
CCDC196-201ENST00000359454 FKBP4Q02790 459 aaKnown RBP eCLIP8.48□□□□□ -1.05
CCDC196-201ENST00000359454 CLEC4GQ6UXB4 293 aa8.48□□□□□ -1.05
CCDC196-201ENST00000359454 NBPF5PQ86XG9 351 aaPredicted RBP8.48□□□□□ -1.05
CCDC196-201ENST00000359454 CDAN1Q8IWY9 1227 aa8.48□□□□□ -1.05
CCDC196-201ENST00000359454 MRPL50Q8N5N7 158 aaKnown RBP8.48□□□□□ -1.05
CCDC196-201ENST00000359454 C7orf43Q8WVR3 580 aa8.48□□□□□ -1.05
CCDC196-201ENST00000359454 HACL1Q9UJ83 578 aa8.48□□□□□ -1.05
CCDC196-201ENST00000359454 ZNF652Q9Y2D9 606 aa8.48□□□□□ -1.05
CCDC196-201ENST00000359454 ARFGEF2Q9Y6D5 1785 aa8.48□□□□□ -1.05
CCDC196-201ENST00000359454 SCN4AP35499 1836 aa8.47□□□□□ -1.05
CCDC196-201ENST00000359454 BTBD11A6QL63 1104 aa8.47□□□□□ -1.05
CCDC196-201ENST00000359454 U2SURPO15042 1029 aaKnown RBP8.47□□□□□ -1.05
CCDC196-201ENST00000359454 PER1O15534 1290 aaPredicted RBP8.47□□□□□ -1.05
CCDC196-201ENST00000359454 HRO43593 1189 aa8.47□□□□□ -1.05
CCDC196-201ENST00000359454 SSTR3P32745 418 aaPredicted RBP8.47□□□□□ -1.05
CCDC196-201ENST00000359454 EAPPQ56P03 285 aaPredicted RBP8.47□□□□□ -1.05
CCDC196-201ENST00000359454 PNMA8AQ86V59 439 aaPredicted RBP8.47□□□□□ -1.05
CCDC196-201ENST00000359454 RTKN2Q8IZC4 609 aa8.47□□□□□ -1.05
CCDC196-201ENST00000359454 FAM217BQ9NTX9 383 aaPredicted RBP8.47□□□□□ -1.05
CCDC196-201ENST00000359454 SIPA1L3O60292 1781 aaPredicted RBP8.47□□□□□ -1.05
CCDC196-201ENST00000359454 KIF7Q2M1P5 1343 aa8.47□□□□□ -1.05
CCDC196-201ENST00000359454 CEMIPQ8WUJ3 1361 aa8.47□□□□□ -1.05
CCDC196-201ENST00000359454 BCORQ6W2J9 1755 aa8.46□□□□□ -1.05
CCDC196-201ENST00000359454 KLRG2A4D1S0 409 aaPredicted RBP8.46□□□□□ -1.06
CCDC196-201ENST00000359454 KCNQ3O43525 872 aa8.46□□□□□ -1.06
CCDC196-201ENST00000359454 MS4A1P11836 297 aa8.46□□□□□ -1.06
CCDC196-201ENST00000359454 EPHX2P34913 555 aa8.46□□□□□ -1.06
CCDC196-201ENST00000359454 CC2D1BQ5T0F9 858 aaKnown RBP8.46□□□□□ -1.06
CCDC196-201ENST00000359454 TPTE2Q6XPS3 522 aa8.46□□□□□ -1.06
CCDC196-201ENST00000359454 UBE2Q2Q8WVN8 375 aa8.46□□□□□ -1.06
CCDC196-201ENST00000359454 ZNF277Q9NRM2 450 aaPredicted RBP8.46□□□□□ -1.06
CCDC196-201ENST00000359454 WBP1LQ9NX94 342 aa8.46□□□□□ -1.06
CCDC196-201ENST00000359454 USP16Q9Y5T5 823 aa8.46□□□□□ -1.06
CCDC196-201ENST00000359454 ZNF541Q9H0D2 1346 aa8.46□□□□□ -1.06
CCDC196-201ENST00000359454 COL3A1P02461 1466 aaPredicted RBP8.45□□□□□ -1.06
CCDC196-201ENST00000359454 CACNA1SQ13698 1873 aa8.45□□□□□ -1.06
CCDC196-201ENST00000359454 RASSF10A6NK89 507 aa8.45□□□□□ -1.06
CCDC196-201ENST00000359454 FZD9O00144 591 aa8.45□□□□□ -1.06
CCDC196-201ENST00000359454 SNRPA1P09661 255 aaKnown RBP8.45□□□□□ -1.06
CCDC196-201ENST00000359454 ALDH1B1P30837 517 aa8.45□□□□□ -1.06
CCDC196-201ENST00000359454 IARSP41252 1262 aaKnown RBP8.45□□□□□ -1.06
CCDC196-201ENST00000359454 LBX1P52954 281 aa8.45□□□□□ -1.06
CCDC196-201ENST00000359454 DEFB115Q30KQ5 88 aa8.45□□□□□ -1.06
CCDC196-201ENST00000359454 SWT1Q5T5J6 900 aaKnown RBP8.45□□□□□ -1.06
CCDC196-201ENST00000359454 SULF1Q8IWU6 871 aa8.45□□□□□ -1.06
CCDC196-201ENST00000359454 CNTROBQ8N137 903 aa8.45□□□□□ -1.06
CCDC196-201ENST00000359454 IL27Q8NEV9 243 aa8.45□□□□□ -1.06
CCDC196-201ENST00000359454 DDRGK1Q96HY6 314 aa8.45□□□□□ -1.06
CCDC196-201ENST00000359454 FAM117AQ9C073 453 aa8.45□□□□□ -1.06
CCDC196-201ENST00000359454 NIP7Q9Y221 180 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCDC196-201ENST00000359454 NPC1L1Q9UHC9 1359 aa8.45□□□□□ -1.06
CCDC196-201ENST00000359454 ADAMTSL1Q8N6G6 1762 aa8.44□□□□□ -1.06
CCDC196-201ENST00000359454 GOLGA8CPA6NN73 597 aa8.44□□□□□ -1.06
CCDC196-201ENST00000359454 DDX11L8A8MPP1 907 aa8.44□□□□□ -1.06
CCDC196-201ENST00000359454 PIP4K2AP48426 406 aaPredicted RBP8.44□□□□□ -1.06
CCDC196-201ENST00000359454 MAP2K1Q02750 393 aaPredicted RBP8.44□□□□□ -1.06
CCDC196-201ENST00000359454 TMEM132AQ24JP5 1023 aa8.44□□□□□ -1.06
CCDC196-201ENST00000359454 GPC2Q8N158 579 aa8.44□□□□□ -1.06
CCDC196-201ENST00000359454 SYNE4Q8N205 404 aa8.44□□□□□ -1.06
CCDC196-201ENST00000359454 ZFRQ96KR1 1074 aaKnown RBP8.44□□□□□ -1.06
CCDC196-201ENST00000359454 PHACTR3Q96KR7 559 aa8.44□□□□□ -1.06
CCDC196-201ENST00000359454 PRAMEF22A3QJZ6 481 aa8.43□□□□□ -1.06
CCDC196-201ENST00000359454 HSPA8P11142 646 aaKnown RBP8.43□□□□□ -1.06
CCDC196-201ENST00000359454 GTF2E1P29083 439 aaPredicted RBP8.43□□□□□ -1.06
CCDC196-201ENST00000359454 PRKAR2BP31323 418 aa8.43□□□□□ -1.06
CCDC196-201ENST00000359454 SLC4A3P48751 1232 aa8.43□□□□□ -1.06
CCDC196-201ENST00000359454 EIF6P56537 245 aaKnown RBP8.43□□□□□ -1.06
CCDC196-201ENST00000359454 MAP1SQ66K74 1059 aaPredicted RBP8.43□□□□□ -1.06
CCDC196-201ENST00000359454 CC2D2BQ6DHV5 1058 aa8.43□□□□□ -1.06
CCDC196-201ENST00000359454 OLFM4Q6UX06 510 aa8.43□□□□□ -1.06
CCDC196-201ENST00000359454 SAMD7Q7Z3H4 446 aa8.43□□□□□ -1.06
CCDC196-201ENST00000359454 JDP2Q8WYK2 163 aa8.43□□□□□ -1.06
CCDC196-201ENST00000359454 RTF1Q92541 710 aaKnown RBP8.43□□□□□ -1.06
CCDC196-201ENST00000359454 PSMD1Q99460 953 aa8.43□□□□□ -1.06
CCDC196-201ENST00000359454 ABT1Q9ULW3 272 aaKnown RBP8.43□□□□□ -1.06
CCDC196-201ENST00000359454 RNF123Q5XPI4 1314 aa8.43□□□□□ -1.06
CCDC196-201ENST00000359454 WDR33Q9C0J8 1336 aaKnown RBP8.43□□□□□ -1.06
CCDC196-201ENST00000359454 FAM177BA6PVY3 158 aa8.42□□□□□ -1.06
CCDC196-201ENST00000359454 LMOD1P29536 600 aaPredicted RBP8.42□□□□□ -1.06
CCDC196-201ENST00000359454 GRIPAP1Q4V328 841 aa8.42□□□□□ -1.06
CCDC196-201ENST00000359454 NBPF10Q6P3W6 841 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms