RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 PTPRTO14522 1441 aa13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 GCFC2P16383 781 aaKnown RBP13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 PDCP20941 246 aa13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 RABEP2Q9H5N1 569 aa13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 PUF60Q9UHX1 559 aaKnown RBP13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 TTC37Q6PGP7 1564 aa13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 PSME1Q06323 249 aa13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 CASP8Q14790 479 aa13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 NBPF10Q6P3W6 841 aaKnown RBP13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 IL17RAQ96F46 866 aa13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 ZSCAN31Q96LW9 406 aaPredicted RBP13.16□□□□□ -0.3
SEPSECS-201ENST00000358971 CHMP4BP1P59074 171 aa13.15□□□□□ -0.3
SEPSECS-201ENST00000358971 PRPF38AQ8NAV1 312 aaKnown RBP13.15□□□□□ -0.3
SEPSECS-201ENST00000358971 DHX58Q96C10 678 aa13.15□□□□□ -0.3
SEPSECS-201ENST00000358971 SH2B1Q9NRF2 756 aaPredicted RBP13.15□□□□□ -0.3
SEPSECS-201ENST00000358971 L1RE1Q9UN81 338 aa13.15□□□□□ -0.3
SEPSECS-201ENST00000358971 CCDC9Q9Y3X0 531 aaKnown RBP13.15□□□□□ -0.3
SEPSECS-201ENST00000358971 CDC42BPAQ5VT25 1732 aa13.15□□□□□ -0.3
SEPSECS-201ENST00000358971 FRMD3A2A2Y4 597 aa13.15□□□□□ -0.3
SEPSECS-201ENST00000358971 CTAGE5O15320 804 aa13.15□□□□□ -0.3
SEPSECS-201ENST00000358971 MAP4K4O95819 1239 aaPredicted RBP13.15□□□□□ -0.3
SEPSECS-201ENST00000358971 C8orf58Q8NAV2 365 aa13.15□□□□□ -0.3
SEPSECS-201ENST00000358971 HNRNPLLQ8WVV9 542 aaKnown RBP13.15□□□□□ -0.3
SEPSECS-201ENST00000358971 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
SEPSECS-201ENST00000358971 YTHDC2Q9H6S0 1430 aaKnown RBP13.15□□□□□ -0.3
SEPSECS-201ENST00000358971 RNF40O75150 1001 aa13.15□□□□□ -0.31
SEPSECS-201ENST00000358971 WDHD1O75717 1129 aaPredicted RBP13.15□□□□□ -0.31
SEPSECS-201ENST00000358971 AP1ARQ63HQ0 302 aa13.15□□□□□ -0.31
SEPSECS-201ENST00000358971 SMARCC1Q92922 1105 aaPredicted RBP13.15□□□□□ -0.31
SEPSECS-201ENST00000358971 JAKMIP1Q96N16 626 aaKnown RBP13.15□□□□□ -0.31
SEPSECS-201ENST00000358971 A1CFQ9NQ94 594 aaKnown RBP13.15□□□□□ -0.31
SEPSECS-201ENST00000358971 MCM8Q9UJA3 840 aa13.15□□□□□ -0.31
SEPSECS-201ENST00000358971 PLEKHD1A6NEE1 506 aa13.14□□□□□ -0.31
SEPSECS-201ENST00000358971 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
SEPSECS-201ENST00000358971 MBIPQ9NS73 344 aa13.14□□□□□ -0.31
SEPSECS-201ENST00000358971 ARHGEF40Q8TER5 1519 aa13.14□□□□□ -0.31
SEPSECS-201ENST00000358971 MYO1FO00160 1098 aa13.14□□□□□ -0.31
SEPSECS-201ENST00000358971 INHBEP58166 350 aa13.14□□□□□ -0.31
SEPSECS-201ENST00000358971 ME3Q16798 604 aa13.14□□□□□ -0.31
SEPSECS-201ENST00000358971 CCDC12Q8WUD4 166 aaPredicted RBP13.14□□□□□ -0.31
SEPSECS-201ENST00000358971 CHUKO15111 745 aa13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 RHOXF2BP0C7M4 288 aa13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 CCDC73Q6ZRK6 1079 aa13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 ZKSCAN4Q969J2 545 aaPredicted RBP13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 RHOXF2Q9BQY4 288 aa13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 LRRCC1Q9C099 1032 aa13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 VWA3AA6NCI4 1184 aa13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 ZKSCAN8Q15776 578 aaPredicted RBP13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 NBPF5PQ86XG9 351 aaPredicted RBP13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 PNKPQ96T60 521 aa13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 TERF2IPQ9NYB0 399 aa13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 PPP2R2CQ9Y2T4 447 aa13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 IFT140Q96RY7 1462 aa13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 POTEB2H3BUK9 544 aa13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 DIAPH1O60610 1272 aaKnown RBP13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 CCAR1Q8IX12 1150 aaKnown RBP13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 CENPHQ9H3R5 247 aa13.13□□□□□ -0.31
SEPSECS-201ENST00000358971 KIF24Q5T7B8 1368 aa13.12□□□□□ -0.31
SEPSECS-201ENST00000358971 PRKAR2BP31323 418 aa13.12□□□□□ -0.31
SEPSECS-201ENST00000358971 CLNS1AP54105 237 aaKnown RBP13.12□□□□□ -0.31
SEPSECS-201ENST00000358971 GOLGA8FQ08AF8 430 aa13.12□□□□□ -0.31
SEPSECS-201ENST00000358971 GOLGA8DPQ0D2H9 430 aa13.12□□□□□ -0.31
SEPSECS-201ENST00000358971 ANKZF1Q9H8Y5 726 aa13.12□□□□□ -0.31
SEPSECS-201ENST00000358971 SPG7Q9UQ90 795 aa13.12□□□□□ -0.31
SEPSECS-201ENST00000358971 CYP46A1Q9Y6A2 500 aa13.12□□□□□ -0.31
SEPSECS-201ENST00000358971 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
SEPSECS-201ENST00000358971 IQCA1Q86XH1 822 aa13.12□□□□□ -0.31
SEPSECS-201ENST00000358971 RAPGEF6Q8TEU7 1601 aa13.12□□□□□ -0.31
SEPSECS-201ENST00000358971 SHTN1A0MZ66 631 aa13.11□□□□□ -0.31
SEPSECS-201ENST00000358971 TBC1D8BQ0IIM8 1120 aa13.11□□□□□ -0.31
SEPSECS-201ENST00000358971 IRAK4Q9NWZ3 460 aa13.11□□□□□ -0.31
SEPSECS-201ENST00000358971 CCNHP51946 323 aaPredicted RBP13.11□□□□□ -0.31
SEPSECS-201ENST00000358971 ST3GAL1Q11201 340 aa13.11□□□□□ -0.31
SEPSECS-201ENST00000358971 CRYMQ14894 314 aa13.11□□□□□ -0.31
SEPSECS-201ENST00000358971 SRGAP1Q7Z6B7 1085 aa13.11□□□□□ -0.31
SEPSECS-201ENST00000358971 CEP57Q86XR8 500 aa13.11□□□□□ -0.31
SEPSECS-201ENST00000358971 GGNBP2Q9H3C7 697 aa13.11□□□□□ -0.31
SEPSECS-201ENST00000358971 CPSF2Q9P2I0 782 aaKnown RBP13.11□□□□□ -0.31
SEPSECS-201ENST00000358971 A0A1B0GUA9 196 aa13.11□□□□□ -0.31
SEPSECS-201ENST00000358971 BCAS4Q8TDM0 211 aa13.11□□□□□ -0.31
SEPSECS-201ENST00000358971 SDF4Q9BRK5 362 aa13.11□□□□□ -0.31
SEPSECS-201ENST00000358971 GBP3Q9H0R5 595 aa13.11□□□□□ -0.31
SEPSECS-201ENST00000358971 BSDC1Q9NW68 430 aaPredicted RBP13.11□□□□□ -0.31
SEPSECS-201ENST00000358971 KIAA0754O94854 1291 aa13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 ARID4AP29374 1257 aaPredicted RBP13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 GCKP35557 465 aa13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 DDR1Q08345 913 aa13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 RPGRIP1LQ68CZ1 1315 aa13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 ITFG2Q969R8 447 aa13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 EPB41L2O43491 1005 aaKnown RBP13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 LMOD1P29536 600 aaPredicted RBP13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 USP5P45974 858 aa13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 KARSQ15046 597 aaKnown RBP13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 PREPLQ4J6C6 727 aaPredicted RBP13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 SLC4A10Q6U841 1118 aa13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 ANKRD18AQ8IVF6 992 aa13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 MSL3Q8N5Y2 521 aaKnown RBP13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 OTUD6BQ8N6M0 293 aa13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 SPATS2LQ9NUQ6 558 aaKnown RBP13.1□□□□□ -0.31
SEPSECS-201ENST00000358971 LRRIQ3A6PVS8 624 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms