RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 RNASE9P60153 205 aaKnown RBP11.96□□□□□ -0.49
FXR1-202ENST00000357559 EP400NLQ6ZTU2 488 aa11.96□□□□□ -0.49
FXR1-202ENST00000357559 CCDC121Q6ZUS5 278 aa11.96□□□□□ -0.49
FXR1-202ENST00000357559 TNPO1Q92973 898 aaKnown RBP11.96□□□□□ -0.49
FXR1-202ENST00000357559 ZNF692Q9BU19 519 aaPredicted RBP11.96□□□□□ -0.49
FXR1-202ENST00000357559 GAS8O95995 478 aa11.96□□□□□ -0.49
FXR1-202ENST00000357559 RHOXF2BP0C7M4 288 aa11.96□□□□□ -0.49
FXR1-202ENST00000357559 ASIC1P78348 528 aa11.96□□□□□ -0.49
FXR1-202ENST00000357559 UIMC1Q96RL1 719 aa11.96□□□□□ -0.49
FXR1-202ENST00000357559 RHOXF2Q9BQY4 288 aa11.96□□□□□ -0.49
FXR1-202ENST00000357559 THEMISQ8N1K5 641 aaPredicted RBP11.96□□□□□ -0.5
FXR1-202ENST00000357559 TTLL3Q9Y4R7 772 aa11.96□□□□□ -0.5
FXR1-202ENST00000357559 CEP85LQ5SZL2 805 aa11.96□□□□□ -0.5
FXR1-202ENST00000357559 WDR63Q8IWG1 891 aa11.96□□□□□ -0.5
FXR1-202ENST00000357559 SH2B1Q9NRF2 756 aaPredicted RBP11.96□□□□□ -0.5
FXR1-202ENST00000357559 E7EVH7 732 aa11.96□□□□□ -0.5
FXR1-202ENST00000357559 LDHAL6AQ6ZMR3 332 aa11.96□□□□□ -0.5
FXR1-202ENST00000357559 CHST3Q7LGC8 479 aa11.96□□□□□ -0.5
FXR1-202ENST00000357559 KIFC2Q96AC6 838 aa11.96□□□□□ -0.5
FXR1-202ENST00000357559 DNAI1Q9UI46 699 aa11.96□□□□□ -0.5
FXR1-202ENST00000357559 CUX1P39880 1505 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 FCHSD2O94868 740 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 GTPBP4Q9BZE4 634 aaKnown RBP11.95□□□□□ -0.5
FXR1-202ENST00000357559 CTAGE9A4FU28 777 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 TMPOP42166 694 aaKnown RBP11.95□□□□□ -0.5
FXR1-202ENST00000357559 SMARCC2Q8TAQ2 1214 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 NSD3Q9BZ95 1437 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 MROH2BQ7Z745 1585 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 PPP1R12AO14974 1030 aaPredicted RBP11.95□□□□□ -0.5
FXR1-202ENST00000357559 NAPAP54920 295 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 ERMNQ8TAM6 284 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 ZNF165P49910 485 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 WTAPQ15007 396 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 DIXDC1Q155Q3 683 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 MYOM3Q5VTT5 1437 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 WAPLQ7Z5K2 1190 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 ANKLE2Q86XL3 938 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 CCDC117Q8IWD4 279 aaPredicted RBP11.95□□□□□ -0.5
FXR1-202ENST00000357559 PPME1Q9Y570 386 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 CCDC102BQ68D86 513 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 RSPH3Q86UC2 560 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 VPS52Q8N1B4 723 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 NFE2L2Q16236 605 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 CPLX4Q7Z7G2 160 aa11.95□□□□□ -0.5
FXR1-202ENST00000357559 MCM7P33993 719 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 DHX58Q96C10 678 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 TRIM6Q9C030 488 aaPredicted RBP11.94□□□□□ -0.5
FXR1-202ENST00000357559 ARID4AP29374 1257 aaPredicted RBP11.94□□□□□ -0.5
FXR1-202ENST00000357559 RAPGEF1Q13905 1077 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 TCEANC2Q96MN5 208 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 RABEP2Q9H5N1 569 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 FAM114A2Q9NRY5 505 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 GUCA1BQ9UMX6 200 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 ATP6V0A2Q9Y487 856 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 KIF3CO14782 793 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 MIPOL1Q8TD10 442 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 NAIPQ13075 1403 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 ERBINQ96RT1 1412 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 UBXN1Q04323 297 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 GPIHBP1Q8IV16 184 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 LZTFL1Q9NQ48 299 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 CNPY2Q9Y2B0 182 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 ATP2A1O14983 1001 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 DACT3Q96B18 629 aaPredicted RBP11.94□□□□□ -0.5
FXR1-202ENST00000357559 CRNKL1Q9BZJ0 848 aaKnown RBP11.94□□□□□ -0.5
FXR1-202ENST00000357559 SLC4A4Q9Y6R1 1079 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 HCLS1P14317 486 aaPredicted RBP11.94□□□□□ -0.5
FXR1-202ENST00000357559 FMNL3Q8IVF7 1028 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 SCAPERQ9BY12 1400 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 RIMBP2O15034 1052 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 STX17P56962 302 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 CCDC14Q49A88 953 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 GBP7Q8N8V2 638 aaPredicted RBP11.94□□□□□ -0.5
FXR1-202ENST00000357559 DDX12PQ92771 950 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 GINS2Q9Y248 185 aa11.94□□□□□ -0.5
FXR1-202ENST00000357559 NBPF6Q5VWK0 638 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 NBPF5PQ86XG9 351 aaPredicted RBP11.93□□□□□ -0.5
FXR1-202ENST00000357559 AOPEPQ8N6M6 819 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 NCOA7Q8NI08 942 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 NBPF4Q96M43 638 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 HPDP32754 393 aaPredicted RBP11.93□□□□□ -0.5
FXR1-202ENST00000357559 UBE3BQ7Z3V4 1068 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 ZNF408Q9H9D4 720 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.93□□□□□ -0.54e-17■□□□□ 10.7
FXR1-202ENST00000357559 CYLC1P35663 651 aaPredicted RBP11.93□□□□□ -0.5
FXR1-202ENST00000357559 KSR1Q8IVT5 923 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 BANK1Q8NDB2 785 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 CYP7A1P22680 504 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 MAEAQ7L5Y9 396 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 EHBP1Q8NDI1 1231 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 NEK1Q96PY6 1258 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 ALG1Q9BT22 464 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 CTAGE15A4D2H0 777 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 CTAGE8P0CG41 777 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 CTAGE6Q86UF2 777 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 CTAGE4Q8IX94 777 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 RMND1Q9NWS8 449 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 ANKRD50Q9ULJ7 1429 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 RUSC2Q8N2Y8 1516 aa11.93□□□□□ -0.5
FXR1-202ENST00000357559 KLF18A0A0U1RQI7 1052 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms