RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 MYO1AQ9UBC5 1043 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 PRC1O43663 620 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 TCP11L2Q8N4U5 519 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 PRXQ9BXM0 1461 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 RNF8O76064 485 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 SLC4A8Q2Y0W8 1093 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 IQCA1Q86XH1 822 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 UTP11Q9Y3A2 253 aaKnown RBP9.09□□□□□ -0.95
HTT-201ENST00000355072 DAAM1Q9Y4D1 1078 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 TRIM37O94972 964 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 DZIP1Q86YF9 867 aaKnown RBP9.09□□□□□ -0.95
HTT-201ENST00000355072 RSPH14Q9UHP6 348 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 PSMA7O14818 248 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 CNNM3Q8NE01 707 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 MPHOSPH6Q99547 160 aaKnown RBP9.09□□□□□ -0.95
HTT-201ENST00000355072 ZNF500O60304 480 aaPredicted RBP9.09□□□□□ -0.95
HTT-201ENST00000355072 TWISTNBQ3B726 338 aaPredicted RBP9.09□□□□□ -0.95
HTT-201ENST00000355072 RRP36Q96EU6 259 aaKnown RBP9.09□□□□□ -0.95
HTT-201ENST00000355072 NAA16Q6N069 864 aaPredicted RBP9.09□□□□□ -0.95
HTT-201ENST00000355072 GOLGA6CA6NDK9 693 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 GOLGA6DP0CG33 693 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 NUTM2DQ5VT03 806 aaPredicted RBP9.08□□□□□ -0.96
HTT-201ENST00000355072 NUTM2AQ8IVF1 878 aaPredicted RBP9.08□□□□□ -0.96
HTT-201ENST00000355072 GOLGA6AQ9NYA3 693 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 SLC4A3P48751 1232 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 CALML4Q96GE6 196 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 GOLGA6BA6NDN3 693 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 NRBF2Q96F24 287 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 GLT8D2Q9H1C3 349 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 ODF2LQ9ULJ1 636 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 DNMT1P26358 1616 aaKnown RBP9.08□□□□□ -0.96
HTT-201ENST00000355072 UNC13AQ9UPW8 1703 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 POTEB3A0JP26 581 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 POTEBQ6S5H4 581 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 TTC41PQ6P2S7 1318 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 CHMP4BP1P59074 171 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 UBL4BQ8N7F7 174 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 RAPGEF4Q8WZA2 1011 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 GOPCQ9HD26 462 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 SYT1P21579 422 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 MCUR1Q96AQ8 359 aa9.08□□□□□ -0.96
HTT-201ENST00000355072 ERMNQ8TAM6 284 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 CCHCR1Q8TD31 782 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 PSMD1Q99460 953 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 RABEP2Q9H5N1 569 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 TROQ12816 1431 aaPredicted RBP9.07□□□□□ -0.96
HTT-201ENST00000355072 SHANK2Q9UPX8 1470 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 MGEA5O60502 916 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 PDCD2Q16342 344 aaPredicted RBP9.07□□□□□ -0.96
HTT-201ENST00000355072 ARHGAP6O43182 974 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 BAG4O95429 457 aaKnown RBP9.07□□□□□ -0.96
HTT-201ENST00000355072 UBASH3AP57075 661 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 GNG11P61952 73 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 CCDC84Q86UT8 332 aaPredicted RBP9.07□□□□□ -0.96
HTT-201ENST00000355072 NUF2Q9BZD4 464 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.07□□□□□ -0.967e-7■■■■□ 24.2
HTT-201ENST00000355072 DUOX2Q9NRD8 1548 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 PAK2Q13177 524 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 DBN1Q16643 649 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 TSPYL2Q9H2G4 693 aaPredicted RBP9.07□□□□□ -0.96
HTT-201ENST00000355072 NKIRAS1Q9NYS0 192 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 SNX16P57768 344 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 CCDC113Q9H0I3 377 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 EPS15L1Q9UBC2 864 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 PIK3C2GO75747 1445 aa9.07□□□□□ -0.96
HTT-201ENST00000355072 AOX1Q06278 1338 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 ADGRL1O94910 1474 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 DMTNQ08495 405 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 CALCOCO2Q13137 446 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 DNAI1Q9UI46 699 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 PSMD7P51665 324 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 TCHHQ07283 1943 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 EFCAB8A8MWE9 144 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 NDUFAB1O14561 156 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 UBE4AQ14139 1066 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 PDCD7Q8N8D1 485 aaKnown RBP9.06□□□□□ -0.96
HTT-201ENST00000355072 SLC12A7Q9Y666 1083 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 TTC39AQ5SRH9 613 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 SLC52A1Q9NWF4 448 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 FAM177A1Q8N128 213 aaPredicted RBP9.06□□□□□ -0.96
HTT-201ENST00000355072 CROCC2H7BZ55 1655 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 LMNB2Q03252 620 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 EXOC1Q9NV70 894 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 SATB2Q9UPW6 733 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 HIP1RO75146 1068 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 TRIM58Q8NG06 486 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 NUP58Q9BVL2 599 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 CCDC160A6NGH7 325 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 MICALL1Q8N3F8 863 aa9.06□□□□□ -0.96
HTT-201ENST00000355072 HSPA8P11142 646 aaKnown RBP9.05□□□□□ -0.96
HTT-201ENST00000355072 LGSNQ5TDP6 509 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 GKAP1Q5VSY0 366 aaPredicted RBP9.05□□□□□ -0.96
HTT-201ENST00000355072 INTS8Q75QN2 995 aaKnown RBP9.05□□□□□ -0.96
HTT-201ENST00000355072 RAB11FIP4Q86YS3 637 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 GAS8O95995 478 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 CEP85LQ5SZL2 805 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 FAM71BQ8TC56 605 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 GBP5Q96PP8 586 aa9.05□□□□□ -0.96
HTT-201ENST00000355072 SURF6O75683 361 aaKnown RBP9.05□□□□□ -0.96
HTT-201ENST00000355072 ZSCAN22P10073 491 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms