RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 PPP1R1BQ9UD71 204 aaPredicted RBP17.07■□□□□ 0.32
NUP50-201ENST00000347635 ORC3Q9UBD5 711 aaPredicted RBP17.06■□□□□ 0.32
NUP50-201ENST00000347635 AOPEPQ8N6M6 819 aa17.06■□□□□ 0.32
NUP50-201ENST00000347635 GLI2P10070 1586 aa17.06■□□□□ 0.32
NUP50-201ENST00000347635 ATP5J2-PTCD1G3V325 749 aa17.06■□□□□ 0.32
NUP50-201ENST00000347635 CNNM3Q8NE01 707 aa17.06■□□□□ 0.32
NUP50-201ENST00000347635 ZNF287Q9HBT7 754 aa17.06■□□□□ 0.32
NUP50-201ENST00000347635 RNF17Q9BXT8 1623 aaKnown RBP17.06■□□□□ 0.32
NUP50-201ENST00000347635 COPS6Q7L5N1 327 aa17.06■□□□□ 0.32
NUP50-201ENST00000347635 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.06■□□□□ 0.32
NUP50-201ENST00000347635 SLF2Q8IX21 1173 aa17.06■□□□□ 0.32
NUP50-201ENST00000347635 C17orf53Q8N3J3 647 aaPredicted RBP17.06■□□□□ 0.32
NUP50-201ENST00000347635 JARID2Q92833 1246 aaPredicted RBP17.06■□□□□ 0.32
NUP50-201ENST00000347635 UBAC1Q9BSL1 405 aa17.06■□□□□ 0.32
NUP50-201ENST00000347635 OSBPL3Q9H4L5 887 aa17.06■□□□□ 0.32
NUP50-201ENST00000347635 ANKARQ7Z5J8 1434 aa17.05■□□□□ 0.32
NUP50-201ENST00000347635 RPS6KB1P23443 525 aa17.05■□□□□ 0.32
NUP50-201ENST00000347635 CCDC152Q4G0S7 254 aa17.05■□□□□ 0.32
NUP50-201ENST00000347635 KRT222Q8N1A0 295 aa17.05■□□□□ 0.32
NUP50-201ENST00000347635 GTPBP4Q9BZE4 634 aaKnown RBP17.05■□□□□ 0.32
NUP50-201ENST00000347635 SLC27A2O14975 620 aa17.05■□□□□ 0.32
NUP50-201ENST00000347635 KCNG4Q8TDN1 519 aa17.05■□□□□ 0.32
NUP50-201ENST00000347635 ROBO2Q9HCK4 1378 aa17.05■□□□□ 0.32
NUP50-201ENST00000347635 MAP3K12Q12852 859 aa17.05■□□□□ 0.32
NUP50-201ENST00000347635 CHAMP1Q96JM3 812 aa17.05■□□□□ 0.32
NUP50-201ENST00000347635 ZNHIT6Q9NWK9 470 aaKnown RBP17.05■□□□□ 0.32
NUP50-201ENST00000347635 GPTP24298 496 aa17.04■□□□□ 0.32
NUP50-201ENST00000347635 ST5P78524 1137 aa17.04■□□□□ 0.32
NUP50-201ENST00000347635 SLC39A6Q13433 755 aa17.04■□□□□ 0.32
NUP50-201ENST00000347635 BMS1Q14692 1282 aaKnown RBP17.04■□□□□ 0.32
NUP50-201ENST00000347635 TTF1Q15361 905 aaPredicted RBP17.04■□□□□ 0.32
NUP50-201ENST00000347635 ARHGAP29Q52LW3 1261 aa17.04■□□□□ 0.32
NUP50-201ENST00000347635 NYXQ9GZU5 481 aa17.04■□□□□ 0.32
NUP50-201ENST00000347635 AGLP35573 1532 aa17.04■□□□□ 0.32
NUP50-201ENST00000347635 HAND2P61296 217 aa17.04■□□□□ 0.32
NUP50-201ENST00000347635 NCOA7Q8NI08 942 aa17.04■□□□□ 0.32
NUP50-201ENST00000347635 TMOD2Q9NZR1 351 aa17.04■□□□□ 0.32
NUP50-201ENST00000347635 QRICH2Q9H0J4 1663 aa17.03■□□□□ 0.32
NUP50-201ENST00000347635 BICC1Q9H694 974 aaKnown RBP17.03■□□□□ 0.32
NUP50-201ENST00000347635 LDHAL6AQ6ZMR3 332 aa17.03■□□□□ 0.32
NUP50-201ENST00000347635 ANKIB1Q9P2G1 1089 aa17.03■□□□□ 0.32
NUP50-201ENST00000347635 STIM1Q13586 685 aa17.03■□□□□ 0.32
NUP50-201ENST00000347635 CLSTN2Q9H4D0 955 aa17.03■□□□□ 0.32
NUP50-201ENST00000347635 DDX21Q9NR30 783 aaKnown RBP eCLIP17.03■□□□□ 0.32
NUP50-201ENST00000347635 GOLGA8AA7E2F4 631 aa17.02■□□□□ 0.32
NUP50-201ENST00000347635 RIOK3O14730 519 aaKnown RBP17.02■□□□□ 0.32
NUP50-201ENST00000347635 ISM2Q6H9L7 571 aa17.02■□□□□ 0.32
NUP50-201ENST00000347635 KIF5CO60282 957 aa17.02■□□□□ 0.32
NUP50-201ENST00000347635 SSRP1Q08945 709 aaKnown RBP17.02■□□□□ 0.32
NUP50-201ENST00000347635 SLC12A7Q9Y666 1083 aa17.02■□□□□ 0.32
NUP50-201ENST00000347635 GOLGA6L9A6NEM1 432 aa17.02■□□□□ 0.31
NUP50-201ENST00000347635 NBPF7P0C2Y1 421 aaPredicted RBP17.02■□□□□ 0.31
NUP50-201ENST00000347635 SETDB2Q96T68 719 aa17.02■□□□□ 0.31
NUP50-201ENST00000347635 ADGRB3O60242 1522 aa17.02■□□□□ 0.31
NUP50-201ENST00000347635 KLF18A0A0U1RQI7 1052 aa17.02■□□□□ 0.31
NUP50-201ENST00000347635 NBPF6Q5VWK0 638 aa17.02■□□□□ 0.31
NUP50-201ENST00000347635 NBPF5PQ86XG9 351 aaPredicted RBP17.02■□□□□ 0.31
NUP50-201ENST00000347635 SSH3Q8TE77 659 aa17.02■□□□□ 0.31
NUP50-201ENST00000347635 ACSBG1Q96GR2 724 aa17.02■□□□□ 0.31
NUP50-201ENST00000347635 NBPF4Q96M43 638 aa17.02■□□□□ 0.31
NUP50-201ENST00000347635 UQCRFS1P1P0C7P4 283 aa17.01■□□□□ 0.31
NUP50-201ENST00000347635 PTPDC1A2A3K4 754 aa17.01■□□□□ 0.31
NUP50-201ENST00000347635 SLU7O95391 586 aaKnown RBP17.01■□□□□ 0.31
NUP50-201ENST00000347635 RAB11FIP4Q86YS3 637 aa17.01■□□□□ 0.31
NUP50-201ENST00000347635 CALCOCO1Q9P1Z2 691 aa17.01■□□□□ 0.31
NUP50-201ENST00000347635 SETBP1Q9Y6X0 1596 aa17.01■□□□□ 0.31
NUP50-201ENST00000347635 FEZ1Q99689 392 aa17.01■□□□□ 0.31
NUP50-201ENST00000347635 CBX8Q9HC52 389 aa17.01■□□□□ 0.31
NUP50-201ENST00000347635 SYKP43405 635 aa17.01■□□□□ 0.31
NUP50-201ENST00000347635 METAP2P50579 478 aaKnown RBP eCLIP17.01■□□□□ 0.31
NUP50-201ENST00000347635 NAPBQ9H115 298 aa17.01■□□□□ 0.31
NUP50-201ENST00000347635 MTMR7Q9Y216 660 aa17.01■□□□□ 0.31
NUP50-201ENST00000347635 ZNF397Q8NF99 534 aaPredicted RBP17■□□□□ 0.31
NUP50-201ENST00000347635 FAM227BQ96M60 508 aa17■□□□□ 0.31
NUP50-201ENST00000347635 TM6SF1Q9BZW5 370 aa17■□□□□ 0.31
NUP50-201ENST00000347635 SNRKQ9NRH2 765 aa17■□□□□ 0.31
NUP50-201ENST00000347635 STAP2Q9UGK3 403 aa17■□□□□ 0.31
NUP50-201ENST00000347635 CDK12Q9NYV4 1490 aaPredicted RBP17■□□□□ 0.31
NUP50-201ENST00000347635 USP6P35125 1406 aa17■□□□□ 0.31
NUP50-201ENST00000347635 APOBRQ0VD83 1088 aa17■□□□□ 0.31
NUP50-201ENST00000347635 USP44Q9H0E7 712 aa17■□□□□ 0.31
NUP50-201ENST00000347635 ERBB4Q15303 1308 aa17■□□□□ 0.31
NUP50-201ENST00000347635 ZNF75DP51815 510 aa17■□□□□ 0.31
NUP50-201ENST00000347635 ZNF790Q6PG37 636 aa17■□□□□ 0.31
NUP50-201ENST00000347635 CDC37L1Q7L3B6 337 aa17■□□□□ 0.31
NUP50-201ENST00000347635 CCDC102AQ96A19 550 aa17■□□□□ 0.31
NUP50-201ENST00000347635 PAG1Q9NWQ8 432 aa17■□□□□ 0.31
NUP50-201ENST00000347635 OGFRQ9NZT2 677 aa17■□□□□ 0.31
NUP50-201ENST00000347635 INO80Q9ULG1 1556 aaPredicted RBP17■□□□□ 0.31
NUP50-201ENST00000347635 CCDC196A0A1B0GTZ2 297 aa17■□□□□ 0.31
NUP50-201ENST00000347635 POLR3GO15318 223 aaPredicted RBP17■□□□□ 0.31
NUP50-201ENST00000347635 IARSP41252 1262 aaKnown RBP17■□□□□ 0.31
NUP50-201ENST00000347635 RBM5P52756 815 aaKnown RBP eCLIP17■□□□□ 0.31
NUP50-201ENST00000347635 UBASH3AP57075 661 aa17■□□□□ 0.31
NUP50-201ENST00000347635 AXDND1Q5T1B0 1012 aaPredicted RBP17■□□□□ 0.31
NUP50-201ENST00000347635 CCDC102BQ68D86 513 aa17■□□□□ 0.31
NUP50-201ENST00000347635 FAM173BQ6P4H8 233 aa17■□□□□ 0.31
NUP50-201ENST00000347635 DHX32Q7L7V1 743 aaKnown RBP17■□□□□ 0.31
NUP50-201ENST00000347635 ABCF2Q9UG63 623 aa17■□□□□ 0.31
NUP50-201ENST00000347635 RTCBQ9Y3I0 505 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms