RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 C16orf71Q8IYS4 520 aaPredicted RBP20.4■□□□□ 0.86
RAB5C-201ENST00000346213 ZNRF3Q9ULT6 936 aa20.4■□□□□ 0.86
RAB5C-201ENST00000346213 MINPP1Q9UNW1 487 aa20.4■□□□□ 0.86
RAB5C-201ENST00000346213 SCN4AP35499 1836 aa20.39■□□□□ 0.86
RAB5C-201ENST00000346213 SMC4Q9NTJ3 1288 aa20.39■□□□□ 0.86
RAB5C-201ENST00000346213 C6orf229H3BNL8 230 aa20.38■□□□□ 0.85
RAB5C-201ENST00000346213 UFL1O94874 794 aa20.38■□□□□ 0.85
RAB5C-201ENST00000346213 RARSP54136 660 aaKnown RBP20.38■□□□□ 0.85
RAB5C-201ENST00000346213 ALDH1L2Q3SY69 923 aa20.38■□□□□ 0.85
RAB5C-201ENST00000346213 SUPT20HQ8NEM7 779 aa20.38■□□□□ 0.85
RAB5C-201ENST00000346213 SRCIN1Q9C0H9 1055 aa20.38■□□□□ 0.85
RAB5C-201ENST00000346213 A0A1B0GUL6 1792 aa20.38■□□□□ 0.85
RAB5C-201ENST00000346213 UTYO14607 1347 aa20.38■□□□□ 0.85
RAB5C-201ENST00000346213 ALDH1L1O75891 902 aa20.38■□□□□ 0.85
RAB5C-201ENST00000346213 EPHX2P34913 555 aa20.38■□□□□ 0.85
RAB5C-201ENST00000346213 EIF6P56537 245 aaKnown RBP20.38■□□□□ 0.85
RAB5C-201ENST00000346213 FSTL1Q12841 308 aa20.38■□□□□ 0.85
RAB5C-201ENST00000346213 WASHC4Q2M389 1173 aa20.38■□□□□ 0.85
RAB5C-201ENST00000346213 TXNRD3Q86VQ6 643 aa20.38■□□□□ 0.85
RAB5C-201ENST00000346213 ZNF594Q96JF6 807 aaPredicted RBP20.38■□□□□ 0.85
RAB5C-201ENST00000346213 VPS33BQ9H267 617 aa20.38■□□□□ 0.85
RAB5C-201ENST00000346213 BSDC1Q9NW68 430 aaPredicted RBP20.38■□□□□ 0.85
RAB5C-201ENST00000346213 SUPT16HQ9Y5B9 1047 aaKnown RBP20.38■□□□□ 0.85
RAB5C-201ENST00000346213 PTPRCP08575 1304 aa20.37■□□□□ 0.85
RAB5C-201ENST00000346213 LMBR1LQ6UX01 489 aa20.37■□□□□ 0.85
RAB5C-201ENST00000346213 SMC1BQ8NDV3 1235 aa20.37■□□□□ 0.85
RAB5C-201ENST00000346213 HACL1Q9UJ83 578 aa20.37■□□□□ 0.85
RAB5C-201ENST00000346213 ZBTB12Q9Y330 459 aaPredicted RBP20.37■□□□□ 0.85
RAB5C-201ENST00000346213 ZNF646O15015 1829 aaPredicted RBP20.37■□□□□ 0.85
RAB5C-201ENST00000346213 NEFLP07196 543 aa20.36■□□□□ 0.85
RAB5C-201ENST00000346213 HSP90B1P14625 803 aaKnown RBP20.36■□□□□ 0.85
RAB5C-201ENST00000346213 GMPSP49915 693 aaPredicted RBP20.36■□□□□ 0.85
RAB5C-201ENST00000346213 ANKRD44Q8N8A2 993 aa20.36■□□□□ 0.85
RAB5C-201ENST00000346213 TMX4Q9H1E5 349 aaPredicted RBP20.36■□□□□ 0.85
RAB5C-201ENST00000346213 NOB1Q9ULX3 412 aaKnown RBP20.36■□□□□ 0.85
RAB5C-201ENST00000346213 IRS2Q9Y4H2 1338 aa20.36■□□□□ 0.85
RAB5C-201ENST00000346213 ECE2O60344 883 aa20.35■□□□□ 0.85
RAB5C-201ENST00000346213 FMR1Q06787 632 aaKnown RBP eCLIP20.35■□□□□ 0.85
RAB5C-201ENST00000346213 DNAJC5GQ8N7S2 189 aa20.35■□□□□ 0.85
RAB5C-201ENST00000346213 CDC5LQ99459 802 aaKnown RBP20.35■□□□□ 0.85
RAB5C-201ENST00000346213 ANKIB1Q9P2G1 1089 aa20.35■□□□□ 0.85
RAB5C-201ENST00000346213 XDHP47989 1333 aa20.35■□□□□ 0.85
RAB5C-201ENST00000346213 PSMD14O00487 310 aa20.35■□□□□ 0.85
RAB5C-201ENST00000346213 EGFRP00533 1210 aa20.35■□□□□ 0.85
RAB5C-201ENST00000346213 EAPPQ56P03 285 aaPredicted RBP20.35■□□□□ 0.85
RAB5C-201ENST00000346213 USP44Q9H0E7 712 aa20.35■□□□□ 0.85
RAB5C-201ENST00000346213 GGA1Q9UJY5 639 aa20.35■□□□□ 0.85
RAB5C-201ENST00000346213 PCNTO95613 3336 aa20.34■□□□□ 0.85
RAB5C-201ENST00000346213 IQCA1LA6NCM1 817 aa20.34■□□□□ 0.85
RAB5C-201ENST00000346213 CIAPIN1Q6FI81 312 aa20.34■□□□□ 0.85
RAB5C-201ENST00000346213 CHADLQ6NUI6 762 aa20.34■□□□□ 0.85
RAB5C-201ENST00000346213 GPRC5DQ9NZD1 345 aa20.34■□□□□ 0.85
RAB5C-201ENST00000346213 BCAR3O75815 825 aa20.33■□□□□ 0.85
RAB5C-201ENST00000346213 HIRAP54198 1017 aaPredicted RBP20.33■□□□□ 0.85
RAB5C-201ENST00000346213 TRPM4Q8TD43 1214 aa20.33■□□□□ 0.85
RAB5C-201ENST00000346213 BICC1Q9H694 974 aaKnown RBP20.33■□□□□ 0.85
RAB5C-201ENST00000346213 ITGBL1O95965 494 aaPredicted RBP20.32■□□□□ 0.84
RAB5C-201ENST00000346213 BRPF1P55201 1214 aaPredicted RBP20.32■□□□□ 0.84
RAB5C-201ENST00000346213 MAP1SQ66K74 1059 aaPredicted RBP20.32■□□□□ 0.84
RAB5C-201ENST00000346213 HELBQ8NG08 1087 aaPredicted RBP20.32■□□□□ 0.84
RAB5C-201ENST00000346213 PUS3Q9BZE2 481 aaKnown RBP20.32■□□□□ 0.84
RAB5C-201ENST00000346213 C9orf78Q9NZ63 289 aaPredicted RBP20.32■□□□□ 0.84
RAB5C-201ENST00000346213 PASKQ96RG2 1323 aa20.32■□□□□ 0.84
RAB5C-201ENST00000346213 CCT4P50991 539 aaKnown RBP20.32■□□□□ 0.84
RAB5C-201ENST00000346213 CHRNDQ07001 517 aa20.32■□□□□ 0.84
RAB5C-201ENST00000346213 LDHDQ86WU2 507 aa20.32■□□□□ 0.84
RAB5C-201ENST00000346213 TAF5LO75529 589 aa20.31■□□□□ 0.84
RAB5C-201ENST00000346213 CT47B1P0C2W7 299 aaPredicted RBP20.31■□□□□ 0.84
RAB5C-201ENST00000346213 CHMP3Q9Y3E7 222 aa20.31■□□□□ 0.84
RAB5C-201ENST00000346213 RABL6Q3YEC7 729 aaPredicted RBP20.3■□□□□ 0.84
RAB5C-201ENST00000346213 MXD3Q9BW11 206 aa20.3■□□□□ 0.84
RAB5C-201ENST00000346213 ANKRD18BA2A2Z9 1011 aa20.29■□□□□ 0.84
RAB5C-201ENST00000346213 ATP2B4P23634 1241 aa20.29■□□□□ 0.84
RAB5C-201ENST00000346213 IGHMBP2P38935 993 aaKnown RBP20.29■□□□□ 0.84
RAB5C-201ENST00000346213 APLP1P51693 650 aa20.29■□□□□ 0.84
RAB5C-201ENST00000346213 DLK2Q6UY11 383 aa20.29■□□□□ 0.84
RAB5C-201ENST00000346213 KLHDC4Q8TBB5 520 aa20.29■□□□□ 0.84
RAB5C-201ENST00000346213 MED23Q9ULK4 1368 aa20.29■□□□□ 0.84
RAB5C-201ENST00000346213 EYA3Q99504 573 aa20.29■□□□□ 0.84
RAB5C-201ENST00000346213 ZC3H12CQ9C0D7 883 aaKnown RBP20.29■□□□□ 0.84
RAB5C-201ENST00000346213 IFIT5Q13325 482 aaKnown RBP20.28■□□□□ 0.84
RAB5C-201ENST00000346213 PSME4Q14997 1843 aa20.27■□□□□ 0.84
RAB5C-201ENST00000346213 VIL1P09327 827 aaKnown RBP20.26■□□□□ 0.83
RAB5C-201ENST00000346213 SAMD7Q7Z3H4 446 aa20.26■□□□□ 0.83
RAB5C-201ENST00000346213 MICALL2Q8IY33 904 aa20.26■□□□□ 0.83
RAB5C-201ENST00000346213 ZNF804BA4D1E1 1349 aa20.26■□□□□ 0.83
RAB5C-201ENST00000346213 ASTN2O75129 1339 aaPredicted RBP20.26■□□□□ 0.83
RAB5C-201ENST00000346213 TRAF5O00463 557 aa20.26■□□□□ 0.83
RAB5C-201ENST00000346213 TRIM27P14373 513 aa20.26■□□□□ 0.83
RAB5C-201ENST00000346213 RFX5P48382 616 aaPredicted RBP20.26■□□□□ 0.83
RAB5C-201ENST00000346213 LRRC24Q50LG9 513 aa20.26■□□□□ 0.83
RAB5C-201ENST00000346213 GMLQ99445 158 aa20.26■□□□□ 0.83
RAB5C-201ENST00000346213 MPHOSPH8Q99549 860 aa20.26■□□□□ 0.83
RAB5C-201ENST00000346213 MEIS3Q99687 375 aa20.26■□□□□ 0.83
RAB5C-201ENST00000346213 ADARB2Q9NS39 739 aaKnown RBP20.26■□□□□ 0.83
RAB5C-201ENST00000346213 CNOT7Q9UIV1 285 aaKnown RBP20.26■□□□□ 0.83
RAB5C-201ENST00000346213 CLEC11AQ9Y240 323 aa20.26■□□□□ 0.83
RAB5C-201ENST00000346213 LMOD1P29536 600 aaPredicted RBP20.25■□□□□ 0.83
RAB5C-201ENST00000346213 TNIP1Q15025 636 aa20.25■□□□□ 0.83
RAB5C-201ENST00000346213 PNMA8AQ86V59 439 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms