RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ALDH1L1O75891 902 aa17.36■□□□□ 0.37
TPM4-202ENST00000344824 UFL1O94874 794 aa17.36■□□□□ 0.37
TPM4-202ENST00000344824 IGHMBP2P38935 993 aaKnown RBP17.36■□□□□ 0.37
TPM4-202ENST00000344824 CASP7P55210 303 aa17.36■□□□□ 0.37
TPM4-202ENST00000344824 RTFDC1Q9BY42 306 aaPredicted RBP17.36■□□□□ 0.37
TPM4-202ENST00000344824 ITGA6P23229 1130 aa17.35■□□□□ 0.37
TPM4-202ENST00000344824 BRPF1P55201 1214 aaPredicted RBP17.35■□□□□ 0.37
TPM4-202ENST00000344824 PANK1Q8TE04 598 aa17.35■□□□□ 0.37
TPM4-202ENST00000344824 PLA2G12BQ9BX93 195 aa17.35■□□□□ 0.37
TPM4-202ENST00000344824 TRIM27P14373 513 aa17.34■□□□□ 0.37
TPM4-202ENST00000344824 KIAA2012Q0VF49 1180 aa17.34■□□□□ 0.37
TPM4-202ENST00000344824 WASHC4Q2M389 1173 aa17.34■□□□□ 0.37
TPM4-202ENST00000344824 ATF7IPQ6VMQ6 1270 aa17.34■□□□□ 0.37
TPM4-202ENST00000344824 FTSJ3Q8IY81 847 aaKnown RBP17.34■□□□□ 0.37
TPM4-202ENST00000344824 RBM46Q8TBY0 533 aaKnown RBP17.34■□□□□ 0.37
TPM4-202ENST00000344824 EYA3Q99504 573 aa17.34■□□□□ 0.37
TPM4-202ENST00000344824 POLLQ9UGP5 575 aa17.34■□□□□ 0.37
TPM4-202ENST00000344824 GGA1Q9UJY5 639 aa17.34■□□□□ 0.37
TPM4-202ENST00000344824 GTF3C3Q9Y5Q9 886 aa17.34■□□□□ 0.37
TPM4-202ENST00000344824 RTL9Q8NET4 1388 aa17.33■□□□□ 0.37
TPM4-202ENST00000344824 IQCA1LA6NCM1 817 aa17.33■□□□□ 0.36
TPM4-202ENST00000344824 POTECB2RU33 542 aa17.33■□□□□ 0.36
TPM4-202ENST00000344824 G3V3G9 751 aa17.33■□□□□ 0.36
TPM4-202ENST00000344824 EAPPQ56P03 285 aaPredicted RBP17.33■□□□□ 0.36
TPM4-202ENST00000344824 DCAF8Q5TAQ9 597 aa17.33■□□□□ 0.36
TPM4-202ENST00000344824 GPC2Q8N158 579 aa17.33■□□□□ 0.36
TPM4-202ENST00000344824 MPHOSPH8Q99549 860 aa17.33■□□□□ 0.36
TPM4-202ENST00000344824 DBNDD1Q9H9R9 158 aa17.33■□□□□ 0.36
TPM4-202ENST00000344824 SCN9AQ15858 1988 aa17.33■□□□□ 0.36
TPM4-202ENST00000344824 XDHP47989 1333 aa17.32■□□□□ 0.36
TPM4-202ENST00000344824 ANKRD18BA2A2Z9 1011 aa17.32■□□□□ 0.36
TPM4-202ENST00000344824 LMOD1P29536 600 aaPredicted RBP17.32■□□□□ 0.36
TPM4-202ENST00000344824 TAF7LQ5H9L4 462 aa17.32■□□□□ 0.36
TPM4-202ENST00000344824 DZIP1LQ8IYY4 767 aaKnown RBP17.32■□□□□ 0.36
TPM4-202ENST00000344824 TBC1D16Q8TBP0 767 aa17.32■□□□□ 0.36
TPM4-202ENST00000344824 SUCLG2Q96I99 432 aa17.32■□□□□ 0.36
TPM4-202ENST00000344824 CRBNQ96SW2 442 aa17.32■□□□□ 0.36
TPM4-202ENST00000344824 VPS33BQ9H267 617 aa17.32■□□□□ 0.36
TPM4-202ENST00000344824 PSME4Q14997 1843 aa17.32■□□□□ 0.36
TPM4-202ENST00000344824 RAD17O75943 681 aa17.31■□□□□ 0.36
TPM4-202ENST00000344824 RLBP1P12271 317 aa17.31■□□□□ 0.36
TPM4-202ENST00000344824 EPHA10Q5JZY3 1008 aa17.31■□□□□ 0.36
TPM4-202ENST00000344824 LMBR1LQ6UX01 489 aa17.31■□□□□ 0.36
TPM4-202ENST00000344824 SMC1BQ8NDV3 1235 aa17.31■□□□□ 0.36
TPM4-202ENST00000344824 L3MBTL3Q96JM7 780 aaPredicted RBP17.31■□□□□ 0.36
TPM4-202ENST00000344824 API5Q9BZZ5 524 aaKnown RBP17.31■□□□□ 0.36
TPM4-202ENST00000344824 HACL1Q9UJ83 578 aa17.31■□□□□ 0.36
TPM4-202ENST00000344824 ZNRF3Q9ULT6 936 aa17.31■□□□□ 0.36
TPM4-202ENST00000344824 NBPF7P0C2Y1 421 aaPredicted RBP17.3■□□□□ 0.36
TPM4-202ENST00000344824 FOXO4P98177 505 aa17.3■□□□□ 0.36
TPM4-202ENST00000344824 IFIT5Q13325 482 aaKnown RBP17.3■□□□□ 0.36
TPM4-202ENST00000344824 DOK7Q18PE1 504 aa17.3■□□□□ 0.36
TPM4-202ENST00000344824 ARHGAP45Q92619 1136 aa17.3■□□□□ 0.36
TPM4-202ENST00000344824 BSDC1Q9NW68 430 aaPredicted RBP17.3■□□□□ 0.36
TPM4-202ENST00000344824 COG6Q9Y2V7 657 aa17.3■□□□□ 0.36
TPM4-202ENST00000344824 ECE2O60344 883 aa17.3■□□□□ 0.36
TPM4-202ENST00000344824 CSF1RP07333 972 aa17.3■□□□□ 0.36
TPM4-202ENST00000344824 POTEIP0CG38 1075 aa17.3■□□□□ 0.36
TPM4-202ENST00000344824 POTEJP0CG39 1038 aa17.3■□□□□ 0.36
TPM4-202ENST00000344824 MS4A1P11836 297 aa17.3■□□□□ 0.36
TPM4-202ENST00000344824 HSPA6P17066 643 aa17.3■□□□□ 0.36
TPM4-202ENST00000344824 PDE3AQ14432 1141 aa17.3■□□□□ 0.36
TPM4-202ENST00000344824 CIAPIN1Q6FI81 312 aa17.3■□□□□ 0.36
TPM4-202ENST00000344824 ZC3H12CQ9C0D7 883 aaKnown RBP17.3■□□□□ 0.36
TPM4-202ENST00000344824 PODXL2Q9NZ53 605 aa17.3■□□□□ 0.36
TPM4-202ENST00000344824 EPHX2P34913 555 aa17.29■□□□□ 0.36
TPM4-202ENST00000344824 CXCL9Q07325 125 aa17.29■□□□□ 0.36
TPM4-202ENST00000344824 CCDC57Q2TAC2 916 aa17.29■□□□□ 0.36
TPM4-202ENST00000344824 TMEM57Q8N5G2 664 aa17.29■□□□□ 0.36
TPM4-202ENST00000344824 EXOC6Q8TAG9 804 aa17.29■□□□□ 0.36
TPM4-202ENST00000344824 TAF1DQ9H5J8 278 aaPredicted RBP17.29■□□□□ 0.36
TPM4-202ENST00000344824 MINPP1Q9UNW1 487 aa17.29■□□□□ 0.36
TPM4-202ENST00000344824 CLEC11AQ9Y240 323 aa17.29■□□□□ 0.36
TPM4-202ENST00000344824 YDJCA8MPS7 323 aa17.28■□□□□ 0.36
TPM4-202ENST00000344824 ATP2B4P23634 1241 aa17.28■□□□□ 0.36
TPM4-202ENST00000344824 KCNJ4P48050 445 aa17.28■□□□□ 0.36
TPM4-202ENST00000344824 ITPRIPQ8IWB1 547 aa17.28■□□□□ 0.36
TPM4-202ENST00000344824 ZNF594Q96JF6 807 aaPredicted RBP17.28■□□□□ 0.36
TPM4-202ENST00000344824 ADAMTSL1Q8N6G6 1762 aa17.27■□□□□ 0.36
TPM4-202ENST00000344824 CCT4P50991 539 aaKnown RBP17.27■□□□□ 0.35
TPM4-202ENST00000344824 FSTL1Q12841 308 aa17.27■□□□□ 0.35
TPM4-202ENST00000344824 TNIP1Q15025 636 aa17.27■□□□□ 0.35
TPM4-202ENST00000344824 BICC1Q9H694 974 aaKnown RBP17.27■□□□□ 0.35
TPM4-202ENST00000344824 GMPSP49915 693 aaPredicted RBP17.26■□□□□ 0.35
TPM4-202ENST00000344824 SCNN1DP51172 638 aa17.26■□□□□ 0.35
TPM4-202ENST00000344824 CHRNDQ07001 517 aa17.26■□□□□ 0.35
TPM4-202ENST00000344824 CNNM1Q9NRU3 951 aa17.26■□□□□ 0.35
TPM4-202ENST00000344824 PSMD14O00487 310 aa17.25■□□□□ 0.35
TPM4-202ENST00000344824 EPS15P42566 896 aa17.25■□□□□ 0.35
TPM4-202ENST00000344824 CHADLQ6NUI6 762 aa17.25■□□□□ 0.35
TPM4-202ENST00000344824 HELBQ8NG08 1087 aaPredicted RBP17.25■□□□□ 0.35
TPM4-202ENST00000344824 FBXW7Q969H0 707 aa17.25■□□□□ 0.35
TPM4-202ENST00000344824 ANKRD2Q9GZV1 360 aa17.25■□□□□ 0.35
TPM4-202ENST00000344824 MED23Q9ULK4 1368 aa17.25■□□□□ 0.35
TPM4-202ENST00000344824 UTYO14607 1347 aa17.25■□□□□ 0.35
TPM4-202ENST00000344824 WTIPA6NIX2 430 aaPredicted RBP17.24■□□□□ 0.35
TPM4-202ENST00000344824 TAF5LO75529 589 aa17.24■□□□□ 0.35
TPM4-202ENST00000344824 MVPQ14764 893 aaKnown RBP17.24■□□□□ 0.35
TPM4-202ENST00000344824 LDHDQ86WU2 507 aa17.24■□□□□ 0.35
TPM4-202ENST00000344824 CEP350Q5VT06 3117 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms