RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 SHTN1A0MZ66 631 aa18.42■□□□□ 0.54
HMGN3-202ENST00000344726 RIMBP2O15034 1052 aa18.42■□□□□ 0.54
HMGN3-202ENST00000344726 HSP90B1P14625 803 aaKnown RBP18.42■□□□□ 0.54
HMGN3-202ENST00000344726 CASP7P55210 303 aa18.42■□□□□ 0.54
HMGN3-202ENST00000344726 FMR1Q06787 632 aaKnown RBP eCLIP18.42■□□□□ 0.54
HMGN3-202ENST00000344726 GCKRQ14397 625 aa18.42■□□□□ 0.54
HMGN3-202ENST00000344726 WASHC4Q2M389 1173 aa18.42■□□□□ 0.54
HMGN3-202ENST00000344726 CIAPIN1Q6FI81 312 aa18.42■□□□□ 0.54
HMGN3-202ENST00000344726 UBE3BQ7Z3V4 1068 aa18.42■□□□□ 0.54
HMGN3-202ENST00000344726 CNTROBQ8N137 903 aa18.42■□□□□ 0.54
HMGN3-202ENST00000344726 TTLL11Q8NHH1 800 aa18.42■□□□□ 0.54
HMGN3-202ENST00000344726 CDCA7LQ96GN5 454 aa18.42■□□□□ 0.54
HMGN3-202ENST00000344726 E9PSI1 815 aa18.41■□□□□ 0.54
HMGN3-202ENST00000344726 C6orf229H3BNL8 230 aa18.41■□□□□ 0.54
HMGN3-202ENST00000344726 SLFN5Q08AF3 891 aa18.41■□□□□ 0.54
HMGN3-202ENST00000344726 LINS1Q8NG48 757 aa18.41■□□□□ 0.54
HMGN3-202ENST00000344726 GREM2Q9H772 168 aa18.41■□□□□ 0.54
HMGN3-202ENST00000344726 KCNQ5Q9NR82 932 aa18.41■□□□□ 0.54
HMGN3-202ENST00000344726 PODXL2Q9NZ53 605 aa18.41■□□□□ 0.54
HMGN3-202ENST00000344726 RTL9Q8NET4 1388 aa18.41■□□□□ 0.54
HMGN3-202ENST00000344726 WTIPA6NIX2 430 aaPredicted RBP18.4■□□□□ 0.54
HMGN3-202ENST00000344726 MYCNP04198 464 aaPredicted RBP18.4■□□□□ 0.54
HMGN3-202ENST00000344726 DOK7Q18PE1 504 aa18.4■□□□□ 0.54
HMGN3-202ENST00000344726 MKRN1Q9UHC7 482 aaKnown RBP18.4■□□□□ 0.54
HMGN3-202ENST00000344726 BEND3Q5T5X7 828 aa18.39■□□□□ 0.53
HMGN3-202ENST00000344726 USP50Q70EL3 339 aaPredicted RBP18.39■□□□□ 0.53
HMGN3-202ENST00000344726 ADARB2Q9NS39 739 aaKnown RBP18.39■□□□□ 0.53
HMGN3-202ENST00000344726 ZBTB12Q9Y330 459 aaPredicted RBP18.39■□□□□ 0.53
HMGN3-202ENST00000344726 PSMD14O00487 310 aa18.38■□□□□ 0.53
HMGN3-202ENST00000344726 ECE2O60344 883 aa18.38■□□□□ 0.53
HMGN3-202ENST00000344726 UFL1O94874 794 aa18.38■□□□□ 0.53
HMGN3-202ENST00000344726 HIRAP54198 1017 aaPredicted RBP18.38■□□□□ 0.53
HMGN3-202ENST00000344726 ANKRD18AQ8IVF6 992 aa18.38■□□□□ 0.53
HMGN3-202ENST00000344726 PLA2G12BQ9BX93 195 aa18.38■□□□□ 0.53
HMGN3-202ENST00000344726 CNTNAP1P78357 1384 aa18.38■□□□□ 0.53
HMGN3-202ENST00000344726 TMEM88BA6NKF7 163 aa18.37■□□□□ 0.53
HMGN3-202ENST00000344726 TNIP1Q15025 636 aa18.37■□□□□ 0.53
HMGN3-202ENST00000344726 TRMT2AQ8IZ69 625 aaKnown RBP18.37■□□□□ 0.53
HMGN3-202ENST00000344726 TRPM4Q8TD43 1214 aa18.37■□□□□ 0.53
HMGN3-202ENST00000344726 ANKIB1Q9P2G1 1089 aa18.37■□□□□ 0.53
HMGN3-202ENST00000344726 TRAF5O00463 557 aa18.36■□□□□ 0.53
HMGN3-202ENST00000344726 ZNF646O15015 1829 aaPredicted RBP18.36■□□□□ 0.53
HMGN3-202ENST00000344726 PSME4Q14997 1843 aa18.36■□□□□ 0.53
HMGN3-202ENST00000344726 DIEXFQ68CQ4 756 aaKnown RBP18.36■□□□□ 0.53
HMGN3-202ENST00000344726 MIER1Q8N108 512 aa18.36■□□□□ 0.53
HMGN3-202ENST00000344726 MRPL50Q8N5N7 158 aaKnown RBP18.36■□□□□ 0.53
HMGN3-202ENST00000344726 EYA3Q99504 573 aa18.36■□□□□ 0.53
HMGN3-202ENST00000344726 BCL2L13Q9BXK5 485 aa18.36■□□□□ 0.53
HMGN3-202ENST00000344726 GGA1Q9UJY5 639 aa18.36■□□□□ 0.53
HMGN3-202ENST00000344726 XDHP47989 1333 aa18.35■□□□□ 0.53
HMGN3-202ENST00000344726 EGFRP00533 1210 aa18.35■□□□□ 0.53
HMGN3-202ENST00000344726 FAM161AQ3B820 660 aa18.35■□□□□ 0.53
HMGN3-202ENST00000344726 MICALL2Q8IY33 904 aa18.35■□□□□ 0.53
HMGN3-202ENST00000344726 SSH1Q8WYL5 1049 aa18.35■□□□□ 0.53
HMGN3-202ENST00000344726 CDC5LQ99459 802 aaKnown RBP18.35■□□□□ 0.53
HMGN3-202ENST00000344726 CNOT7Q9UIV1 285 aaKnown RBP18.35■□□□□ 0.53
HMGN3-202ENST00000344726 MINPP1Q9UNW1 487 aa18.35■□□□□ 0.53
HMGN3-202ENST00000344726 CSF1RP07333 972 aa18.34■□□□□ 0.53
HMGN3-202ENST00000344726 ZC3H12CQ9C0D7 883 aaKnown RBP18.34■□□□□ 0.53
HMGN3-202ENST00000344726 BSDC1Q9NW68 430 aaPredicted RBP18.34■□□□□ 0.53
HMGN3-202ENST00000344726 PGAP2Q9UHJ9 254 aa18.34■□□□□ 0.53
HMGN3-202ENST00000344726 TRPM7Q96QT4 1865 aa18.34■□□□□ 0.53
HMGN3-202ENST00000344726 A0A1B0GUL6 1792 aa18.34■□□□□ 0.53
HMGN3-202ENST00000344726 HSPA1AP0DMV8 641 aaKnown RBP18.33■□□□□ 0.52
HMGN3-202ENST00000344726 HSPA1BP0DMV9 641 aaKnown RBP18.33■□□□□ 0.52
HMGN3-202ENST00000344726 ITGA6P23229 1130 aa18.33■□□□□ 0.52
HMGN3-202ENST00000344726 FOXO4P98177 505 aa18.33■□□□□ 0.52
HMGN3-202ENST00000344726 CST9Q5W186 159 aa18.33■□□□□ 0.52
HMGN3-202ENST00000344726 VEGFBP49765 207 aa18.32■□□□□ 0.52
HMGN3-202ENST00000344726 SLC4A10Q6U841 1118 aa18.32■□□□□ 0.52
HMGN3-202ENST00000344726 SAMD7Q7Z3H4 446 aa18.32■□□□□ 0.52
HMGN3-202ENST00000344726 DPF2Q92785 391 aa18.32■□□□□ 0.52
HMGN3-202ENST00000344726 GLIS2Q9BZE0 524 aaPredicted RBP18.32■□□□□ 0.52
HMGN3-202ENST00000344726 RASSF10A6NK89 507 aa18.31■□□□□ 0.52
HMGN3-202ENST00000344726 GRM8O00222 908 aa18.31■□□□□ 0.52
HMGN3-202ENST00000344726 VIL1P09327 827 aaKnown RBP18.31■□□□□ 0.52
HMGN3-202ENST00000344726 ATP2B4P23634 1241 aa18.31■□□□□ 0.52
HMGN3-202ENST00000344726 EPHA10Q5JZY3 1008 aa18.31■□□□□ 0.52
HMGN3-202ENST00000344726 DLK2Q6UY11 383 aa18.31■□□□□ 0.52
HMGN3-202ENST00000344726 MED23Q9ULK4 1368 aa18.3■□□□□ 0.52
HMGN3-202ENST00000344726 ALDH1L1O75891 902 aa18.3■□□□□ 0.52
HMGN3-202ENST00000344726 KLRK1P26718 216 aa18.3■□□□□ 0.52
HMGN3-202ENST00000344726 TBC1D10BQ4KMP7 808 aaPredicted RBP18.3■□□□□ 0.52
HMGN3-202ENST00000344726 SAMD1Q6SPF0 538 aaPredicted RBP18.3■□□□□ 0.52
HMGN3-202ENST00000344726 TXNRD3Q86VQ6 643 aa18.3■□□□□ 0.52
HMGN3-202ENST00000344726 SRCIN1Q9C0H9 1055 aa18.3■□□□□ 0.52
HMGN3-202ENST00000344726 ZNF609O15014 1411 aa18.3■□□□□ 0.52
HMGN3-202ENST00000344726 POLR2AP24928 1970 aaKnown RBP18.3■□□□□ 0.52
HMGN3-202ENST00000344726 RPS12P25398 132 aaKnown RBP18.29■□□□□ 0.52
HMGN3-202ENST00000344726 CCT4P50991 539 aaKnown RBP18.29■□□□□ 0.52
HMGN3-202ENST00000344726 COL13A1Q5TAT6 717 aaPredicted RBP18.29■□□□□ 0.52
HMGN3-202ENST00000344726 THSD7BQ9C0I4 1608 aa18.29■□□□□ 0.52
HMGN3-202ENST00000344726 PTPRCP08575 1304 aa18.28■□□□□ 0.52
HMGN3-202ENST00000344726 H7C1D1 291 aa18.28■□□□□ 0.52
HMGN3-202ENST00000344726 ZBTB22O15209 634 aa18.28■□□□□ 0.52
HMGN3-202ENST00000344726 IGHMBP2P38935 993 aaKnown RBP18.28■□□□□ 0.52
HMGN3-202ENST00000344726 ALDH1L2Q3SY69 923 aa18.28■□□□□ 0.52
HMGN3-202ENST00000344726 IFFO2Q5TF58 517 aa18.28■□□□□ 0.52
HMGN3-202ENST00000344726 ZC3H15Q8WU90 426 aaKnown RBP18.28■□□□□ 0.52
HMGN3-202ENST00000344726 C9orf78Q9NZ63 289 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms