RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 PCCAP05165 728 aaPredicted RBP19.4■□□□□ 0.7
PRDM8-201ENST00000339711 NBPF14Q5TI25 921 aa19.4■□□□□ 0.7
PRDM8-201ENST00000339711 NBPF10Q6P3W6 841 aaKnown RBP19.4■□□□□ 0.7
PRDM8-201ENST00000339711 NBPF15Q8N660 670 aa19.4■□□□□ 0.7
PRDM8-201ENST00000339711 SLC9C2Q5TAH2 1124 aa19.39■□□□□ 0.69
PRDM8-201ENST00000339711 XAGE2Q96GT9 111 aa19.39■□□□□ 0.69
PRDM8-201ENST00000339711 NAPBQ9H115 298 aa19.39■□□□□ 0.69
PRDM8-201ENST00000339711 ATP2B1P20020 1258 aa19.39■□□□□ 0.69
PRDM8-201ENST00000339711 VPS53Q5VIR6 699 aa19.39■□□□□ 0.69
PRDM8-201ENST00000339711 NBPF5PQ86XG9 351 aaPredicted RBP19.39■□□□□ 0.69
PRDM8-201ENST00000339711 PXDNQ92626 1479 aa19.39■□□□□ 0.69
PRDM8-201ENST00000339711 CPDO75976 1380 aa19.39■□□□□ 0.69
PRDM8-201ENST00000339711 PTH1RQ03431 593 aa19.39■□□□□ 0.69
PRDM8-201ENST00000339711 RUFY3Q7L099 469 aa19.39■□□□□ 0.69
PRDM8-201ENST00000339711 SETD1AO15047 1707 aaKnown RBP19.38■□□□□ 0.69
PRDM8-201ENST00000339711 RGS12O14924 1447 aa19.38■□□□□ 0.69
PRDM8-201ENST00000339711 PDIA6Q15084 440 aa19.38■□□□□ 0.69
PRDM8-201ENST00000339711 CCDC73Q6ZRK6 1079 aa19.38■□□□□ 0.69
PRDM8-201ENST00000339711 A0A0D9SFI3 127 aa19.38■□□□□ 0.69
PRDM8-201ENST00000339711 CCT2P78371 535 aaKnown RBP19.38■□□□□ 0.69
PRDM8-201ENST00000339711 SETDB2Q96T68 719 aa19.38■□□□□ 0.69
PRDM8-201ENST00000339711 SLC27A2O14975 620 aa19.37■□□□□ 0.69
PRDM8-201ENST00000339711 KLHL40Q2TBA0 621 aa19.37■□□□□ 0.69
PRDM8-201ENST00000339711 ANKRD18AQ8IVF6 992 aa19.37■□□□□ 0.69
PRDM8-201ENST00000339711 ATG3Q9NT62 314 aa19.37■□□□□ 0.69
PRDM8-201ENST00000339711 CCDC39Q9UFE4 941 aa19.37■□□□□ 0.69
PRDM8-201ENST00000339711 FMN2Q9NZ56 1722 aa19.37■□□□□ 0.69
PRDM8-201ENST00000339711 PIK3C2AO00443 1686 aa19.37■□□□□ 0.69
PRDM8-201ENST00000339711 H7C1W4 665 aa19.37■□□□□ 0.69
PRDM8-201ENST00000339711 PARP10Q53GL7 1025 aa19.37■□□□□ 0.69
PRDM8-201ENST00000339711 AK7Q96M32 723 aa19.37■□□□□ 0.69
PRDM8-201ENST00000339711 IQSEC3Q9UPP2 1182 aaPredicted RBP19.37■□□□□ 0.69
PRDM8-201ENST00000339711 RGPD8O14715 1765 aaPredicted RBP19.37■□□□□ 0.69
PRDM8-201ENST00000339711 LOC102724428A0A0B4J2F2 783 aa19.37■□□□□ 0.69
PRDM8-201ENST00000339711 RFC4P35249 363 aa19.37■□□□□ 0.69
PRDM8-201ENST00000339711 SIK1P57059 783 aa19.37■□□□□ 0.69
PRDM8-201ENST00000339711 HOMER1Q86YM7 354 aa19.37■□□□□ 0.69
PRDM8-201ENST00000339711 PUS3Q9BZE2 481 aaKnown RBP19.37■□□□□ 0.69
PRDM8-201ENST00000339711 SAFBQ15424 915 aaKnown RBP eCLIP19.36■□□□□ 0.69
PRDM8-201ENST00000339711 MEGF6O75095 1541 aa19.36■□□□□ 0.69
PRDM8-201ENST00000339711 XRCC6P12956 609 aaKnown RBP eCLIP19.36■□□□□ 0.69
PRDM8-201ENST00000339711 XRN1Q8IZH2 1706 aaKnown RBP19.36■□□□□ 0.69
PRDM8-201ENST00000339711 RBM27Q9P2N5 1060 aaKnown RBP19.36■□□□□ 0.69
PRDM8-201ENST00000339711 SPATA32Q96LK8 384 aa19.35■□□□□ 0.69
PRDM8-201ENST00000339711 PXDNLA1KZ92 1463 aa19.35■□□□□ 0.69
PRDM8-201ENST00000339711 ZSCAN22P10073 491 aaPredicted RBP19.35■□□□□ 0.69
PRDM8-201ENST00000339711 Q6ZUG5 572 aa19.35■□□□□ 0.69
PRDM8-201ENST00000339711 NLRP3Q96P20 1036 aa19.35■□□□□ 0.69
PRDM8-201ENST00000339711 LSG1Q9H089 658 aaKnown RBP19.35■□□□□ 0.69
PRDM8-201ENST00000339711 IL6STP40189 918 aaPredicted RBP19.34■□□□□ 0.69
PRDM8-201ENST00000339711 CTSWP56202 376 aa19.34■□□□□ 0.69
PRDM8-201ENST00000339711 RASEFQ8IZ41 740 aa19.34■□□□□ 0.69
PRDM8-201ENST00000339711 HELLSQ9NRZ9 838 aa19.34■□□□□ 0.69
PRDM8-201ENST00000339711 PPFIA3O75145 1194 aa19.34■□□□□ 0.69
PRDM8-201ENST00000339711 ZNF396Q96N95 335 aaPredicted RBP19.34■□□□□ 0.69
PRDM8-201ENST00000339711 CCDC69A6NI79 296 aa19.34■□□□□ 0.69
PRDM8-201ENST00000339711 MINDY4BA8MYZ0 360 aa19.34■□□□□ 0.69
PRDM8-201ENST00000339711 HAUS7Q99871 368 aa19.34■□□□□ 0.69
PRDM8-201ENST00000339711 RTCBQ9Y3I0 505 aaKnown RBP19.34■□□□□ 0.69
PRDM8-201ENST00000339711 PEAK1Q9H792 1746 aa19.33■□□□□ 0.69
PRDM8-201ENST00000339711 LETM1O95202 739 aaPredicted RBP19.33■□□□□ 0.68
PRDM8-201ENST00000339711 ANKIB1Q9P2G1 1089 aa19.33■□□□□ 0.68
PRDM8-201ENST00000339711 GNPATO15228 680 aa19.33■□□□□ 0.68
PRDM8-201ENST00000339711 HMGN5P82970 282 aaKnown RBP19.33■□□□□ 0.68
PRDM8-201ENST00000339711 SEC62Q99442 399 aaKnown RBP19.33■□□□□ 0.68
PRDM8-201ENST00000339711 USP21Q9UK80 565 aa19.33■□□□□ 0.68
PRDM8-201ENST00000339711 CRKLP46109 303 aaKnown RBP19.32■□□□□ 0.68
PRDM8-201ENST00000339711 NCOA7Q8NI08 942 aa19.32■□□□□ 0.68
PRDM8-201ENST00000339711 CCDC34Q96HJ3 373 aa19.32■□□□□ 0.68
PRDM8-201ENST00000339711 KIF2CQ99661 725 aa19.32■□□□□ 0.68
PRDM8-201ENST00000339711 UBAC1Q9BSL1 405 aa19.32■□□□□ 0.68
PRDM8-201ENST00000339711 GREM2Q9H772 168 aa19.32■□□□□ 0.68
PRDM8-201ENST00000339711 CFAP45Q9UL16 551 aa19.32■□□□□ 0.68
PRDM8-201ENST00000339711 NLRP10Q86W26 655 aa19.31■□□□□ 0.68
PRDM8-201ENST00000339711 NUP133Q8WUM0 1156 aa19.31■□□□□ 0.68
PRDM8-201ENST00000339711 OVOS2A0A0G2JMS6 1433 aa19.31■□□□□ 0.68
PRDM8-201ENST00000339711 GUCY1B3Q02153 619 aa19.31■□□□□ 0.68
PRDM8-201ENST00000339711 TPD52L1Q16890 204 aaPredicted RBP19.31■□□□□ 0.68
PRDM8-201ENST00000339711 TM6SF1Q9BZW5 370 aa19.31■□□□□ 0.68
PRDM8-201ENST00000339711 GOLGA8BA8MQT2 603 aa19.31■□□□□ 0.68
PRDM8-201ENST00000339711 SLC3A2P08195 630 aaKnown RBP19.31■□□□□ 0.68
PRDM8-201ENST00000339711 STK38Q15208 465 aa19.31■□□□□ 0.68
PRDM8-201ENST00000339711 PUM3Q15397 648 aaKnown RBP19.31■□□□□ 0.68
PRDM8-201ENST00000339711 CAMK4Q16566 473 aa19.31■□□□□ 0.68
PRDM8-201ENST00000339711 CHST3Q7LGC8 479 aa19.31■□□□□ 0.68
PRDM8-201ENST00000339711 TFIP11Q9UBB9 837 aaKnown RBP19.31■□□□□ 0.68
PRDM8-201ENST00000339711 KDM6AO15550 1401 aaPredicted RBP19.31■□□□□ 0.68
PRDM8-201ENST00000339711 DTNBO60941 627 aa19.3■□□□□ 0.68
PRDM8-201ENST00000339711 SYT1P21579 422 aa19.3■□□□□ 0.68
PRDM8-201ENST00000339711 RPS6KB1P23443 525 aa19.3■□□□□ 0.68
PRDM8-201ENST00000339711 MCM5P33992 734 aa19.3■□□□□ 0.68
PRDM8-201ENST00000339711 ZAP70P43403 619 aa19.3■□□□□ 0.68
PRDM8-201ENST00000339711 TPTE2Q6XPS3 522 aa19.3■□□□□ 0.68
PRDM8-201ENST00000339711 DHX32Q7L7V1 743 aaKnown RBP19.3■□□□□ 0.68
PRDM8-201ENST00000339711 CCNL1Q9UK58 526 aaPredicted RBP19.3■□□□□ 0.68
PRDM8-201ENST00000339711 ME1P48163 572 aa19.3■□□□□ 0.68
PRDM8-201ENST00000339711 TAF5LO75529 589 aa19.3■□□□□ 0.68
PRDM8-201ENST00000339711 CDKL5O76039 1030 aa19.3■□□□□ 0.68
PRDM8-201ENST00000339711 HLFQ16534 295 aa19.3■□□□□ 0.68
PRDM8-201ENST00000339711 SCAND2PQ9GZW5 306 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms