RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 UBE3BQ7Z3V4 1068 aa17.57■□□□□ 0.4
PTPN21-201ENST00000328736 ZBTB43O43298 467 aa17.57■□□□□ 0.4
PTPN21-201ENST00000328736 CYP7A1P22680 504 aa17.57■□□□□ 0.4
PTPN21-201ENST00000328736 ARL1P40616 181 aaPredicted RBP17.57■□□□□ 0.4
PTPN21-201ENST00000328736 CFAP57Q96MR6 1250 aa17.57■□□□□ 0.4
PTPN21-201ENST00000328736 GRIN2AQ12879 1464 aa17.57■□□□□ 0.4
PTPN21-201ENST00000328736 SETDB2Q96T68 719 aa17.57■□□□□ 0.4
PTPN21-201ENST00000328736 SLC4A4Q9Y6R1 1079 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 LMBR1Q8WVP7 490 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 PI4KAP2A4QPH2 592 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 NDC80O14777 642 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 RTN1Q16799 776 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 HEATR3Q7Z4Q2 680 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 PI4KAP1Q8N8J0 262 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 C6orf50Q9HD87 102 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 PRDM10Q9NQV6 1147 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 MSANTD4Q8NCY6 345 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 FBF1Q8TES7 1133 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 ANKRD24Q8TF21 1146 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 MRVI1Q9Y6F6 885 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 ACEP12821 1306 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 ATP2A1O14983 1001 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 ZNF165P49910 485 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 ZRANB1Q9UGI0 708 aa17.56■□□□□ 0.4
PTPN21-201ENST00000328736 KLF18A0A0U1RQI7 1052 aa17.55■□□□□ 0.4
PTPN21-201ENST00000328736 ADCY5O95622 1261 aa17.55■□□□□ 0.4
PTPN21-201ENST00000328736 KCNG4Q8TDN1 519 aa17.55■□□□□ 0.4
PTPN21-201ENST00000328736 PAXBP1Q9Y5B6 917 aa17.55■□□□□ 0.4
PTPN21-201ENST00000328736 CCDC171Q6TFL3 1326 aa17.55■□□□□ 0.4
PTPN21-201ENST00000328736 GTPBP4Q9BZE4 634 aaKnown RBP17.55■□□□□ 0.4
PTPN21-201ENST00000328736 CBX1P83916 185 aa17.55■□□□□ 0.4
PTPN21-201ENST00000328736 CEP135Q66GS9 1140 aa17.55■□□□□ 0.4
PTPN21-201ENST00000328736 RPRD2Q5VT52 1461 aaKnown RBP17.55■□□□□ 0.4
PTPN21-201ENST00000328736 TTC22Q5TAA0 569 aa17.54■□□□□ 0.4
PTPN21-201ENST00000328736 LRRC2Q9BYS8 371 aa17.54■□□□□ 0.4
PTPN21-201ENST00000328736 NYXQ9GZU5 481 aa17.54■□□□□ 0.4
PTPN21-201ENST00000328736 GNG11P61952 73 aa17.54■□□□□ 0.4
PTPN21-201ENST00000328736 CLEC11AQ9Y240 323 aa17.54■□□□□ 0.4
PTPN21-201ENST00000328736 C16orf71Q8IYS4 520 aaPredicted RBP17.54■□□□□ 0.4
PTPN21-201ENST00000328736 NECAB1Q8N987 351 aa17.54■□□□□ 0.4
PTPN21-201ENST00000328736 RGS22Q8NE09 1264 aa17.54■□□□□ 0.4
PTPN21-201ENST00000328736 PUS7Q96PZ0 661 aaKnown RBP17.54■□□□□ 0.4
PTPN21-201ENST00000328736 ALG1Q9BT22 464 aa17.54■□□□□ 0.4
PTPN21-201ENST00000328736 MXRA7P84157 204 aa17.54■□□□□ 0.4
PTPN21-201ENST00000328736 ANKRD13DQ6ZTN6 518 aa17.54■□□□□ 0.4
PTPN21-201ENST00000328736 CALM1P0DP23 149 aa17.54■□□□□ 0.4
PTPN21-201ENST00000328736 CALM2P0DP24 149 aa17.54■□□□□ 0.4
PTPN21-201ENST00000328736 CALM3P0DP25 149 aa17.54■□□□□ 0.4
PTPN21-201ENST00000328736 NAPAP54920 295 aa17.54■□□□□ 0.4
PTPN21-201ENST00000328736 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
PTPN21-201ENST00000328736 PSMA7O14818 248 aa17.53■□□□□ 0.4
PTPN21-201ENST00000328736 UBASH3AP57075 661 aa17.53■□□□□ 0.4
PTPN21-201ENST00000328736 BMS1Q14692 1282 aaKnown RBP17.53■□□□□ 0.4
PTPN21-201ENST00000328736 CHPF2Q9P2E5 772 aa17.53■□□□□ 0.4
PTPN21-201ENST00000328736 BMP2KLQ5H9B9 411 aa17.53■□□□□ 0.4
PTPN21-201ENST00000328736 KIAA1524Q8TCG1 905 aa17.53■□□□□ 0.4
PTPN21-201ENST00000328736 NAA16Q6N069 864 aaPredicted RBP17.53■□□□□ 0.4
PTPN21-201ENST00000328736 SLU7O95391 586 aaKnown RBP17.53■□□□□ 0.4
PTPN21-201ENST00000328736 TCEANC2Q96MN5 208 aa17.53■□□□□ 0.4
PTPN21-201ENST00000328736 FAM13AO94988 1023 aa17.52■□□□□ 0.4
PTPN21-201ENST00000328736 NLRP3Q96P20 1036 aa17.52■□□□□ 0.4
PTPN21-201ENST00000328736 MEIS3Q99687 375 aa17.52■□□□□ 0.4
PTPN21-201ENST00000328736 GSTA5Q7RTV2 222 aa17.52■□□□□ 0.4
PTPN21-201ENST00000328736 APBB1IPQ7Z5R6 666 aaPredicted RBP17.52■□□□□ 0.4
PTPN21-201ENST00000328736 CADPS2Q86UW7 1296 aa17.52■□□□□ 0.39
PTPN21-201ENST00000328736 C14orf93Q9H972 538 aaKnown RBP17.52■□□□□ 0.39
PTPN21-201ENST00000328736 IL16Q14005 1332 aa17.52■□□□□ 0.39
PTPN21-201ENST00000328736 AFMP43652 599 aa17.52■□□□□ 0.39
PTPN21-201ENST00000328736 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.52■□□□□ 0.39
PTPN21-201ENST00000328736 V9GYY5 206 aaPredicted RBP17.52■□□□□ 0.39
PTPN21-201ENST00000328736 TACC1O75410 805 aa17.51■□□□□ 0.39
PTPN21-201ENST00000328736 FANCAO15360 1455 aa17.51■□□□□ 0.39
PTPN21-201ENST00000328736 PLCG2P16885 1265 aa17.51■□□□□ 0.39
PTPN21-201ENST00000328736 ATP2B3Q16720 1220 aa17.51■□□□□ 0.39
PTPN21-201ENST00000328736 RRP36Q96EU6 259 aaKnown RBP17.51■□□□□ 0.39
PTPN21-201ENST00000328736 ZNF608Q9ULD9 1512 aaPredicted RBP17.51■□□□□ 0.39
PTPN21-201ENST00000328736 SPDYE3A6NKU9 549 aa17.51■□□□□ 0.39
PTPN21-201ENST00000328736 ASIC1P78348 528 aa17.51■□□□□ 0.39
PTPN21-201ENST00000328736 SLC39A6Q13433 755 aa17.51■□□□□ 0.39
PTPN21-201ENST00000328736 TTC16Q8NEE8 873 aa17.51■□□□□ 0.39
PTPN21-201ENST00000328736 TTC14Q96N46 770 aa17.51■□□□□ 0.39
PTPN21-201ENST00000328736 TCHPQ9BT92 498 aa17.51■□□□□ 0.39
PTPN21-201ENST00000328736 GNAT2P19087 354 aa17.51■□□□□ 0.39
PTPN21-201ENST00000328736 ATP6V1AP38606 617 aa17.51■□□□□ 0.39
PTPN21-201ENST00000328736 PICALMQ13492 652 aa17.51■□□□□ 0.39
PTPN21-201ENST00000328736 CCDC117Q8IWD4 279 aaPredicted RBP17.51■□□□□ 0.39
PTPN21-201ENST00000328736 CTAGE15A4D2H0 777 aa17.5■□□□□ 0.39
PTPN21-201ENST00000328736 CTAGE8P0CG41 777 aa17.5■□□□□ 0.39
PTPN21-201ENST00000328736 CTAGE6Q86UF2 777 aa17.5■□□□□ 0.39
PTPN21-201ENST00000328736 CTAGE4Q8IX94 777 aa17.5■□□□□ 0.39
PTPN21-201ENST00000328736 PCDHB15Q9Y5E8 787 aa17.5■□□□□ 0.39
PTPN21-201ENST00000328736 ZSCAN22P10073 491 aaPredicted RBP17.5■□□□□ 0.39
PTPN21-201ENST00000328736 HSPA4P34932 840 aa17.5■□□□□ 0.39
PTPN21-201ENST00000328736 PAIP2Q9BPZ3 127 aaKnown RBP17.5■□□□□ 0.39
PTPN21-201ENST00000328736 CEP83Q9Y592 693 aa17.5■□□□□ 0.39
PTPN21-201ENST00000328736 CCDC14Q49A88 953 aa17.5■□□□□ 0.39
PTPN21-201ENST00000328736 ANAPC4Q9UJX5 808 aa17.5■□□□□ 0.39
PTPN21-201ENST00000328736 MAP3K1Q13233 1512 aa17.5■□□□□ 0.39
PTPN21-201ENST00000328736 MSH6P52701 1360 aa17.5■□□□□ 0.39
PTPN21-201ENST00000328736 MAGEB6P1A0A0J9YX57 407 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms