RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 RIMBP2O15034 1052 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 RAD17O75943 681 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 ITGA6P23229 1130 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 EPS15P42566 896 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 HTRA3P83110 453 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 ALDH1L2Q3SY69 923 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 CIAPIN1Q6FI81 312 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 PNMA8AQ86V59 439 aaPredicted RBP12.61□□□□□ -0.39
CCDC65-202ENST00000320516 EYA3Q99504 573 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 ANKIB1Q9P2G1 1089 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 GGA1Q9UJY5 639 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 MINPP1Q9UNW1 487 aa12.61□□□□□ -0.39
CCDC65-202ENST00000320516 UFL1O94874 794 aa12.6□□□□□ -0.39
CCDC65-202ENST00000320516 CT47B1P0C2W7 299 aaPredicted RBP12.6□□□□□ -0.39
CCDC65-202ENST00000320516 EPHA10Q5JZY3 1008 aa12.6□□□□□ -0.39
CCDC65-202ENST00000320516 SLC4A10Q6U841 1118 aa12.6□□□□□ -0.39
CCDC65-202ENST00000320516 SRCIN1Q9C0H9 1055 aa12.6□□□□□ -0.39
CCDC65-202ENST00000320516 DBNDD1Q9H9R9 158 aa12.6□□□□□ -0.39
CCDC65-202ENST00000320516 GPRC5DQ9NZD1 345 aa12.6□□□□□ -0.39
CCDC65-202ENST00000320516 ITGBL1O95965 494 aaPredicted RBP12.59□□□□□ -0.39
CCDC65-202ENST00000320516 LMOD1P29536 600 aaPredicted RBP12.59□□□□□ -0.39
CCDC65-202ENST00000320516 EAPPQ56P03 285 aaPredicted RBP12.59□□□□□ -0.39
CCDC65-202ENST00000320516 BCL2L13Q9BXK5 485 aa12.59□□□□□ -0.39
CCDC65-202ENST00000320516 ZC3H12CQ9C0D7 883 aaKnown RBP12.59□□□□□ -0.39
CCDC65-202ENST00000320516 UTYO14607 1347 aa12.59□□□□□ -0.39
CCDC65-202ENST00000320516 PASKQ96RG2 1323 aa12.59□□□□□ -0.39
CCDC65-202ENST00000320516 WTIPA6NIX2 430 aaPredicted RBP12.58□□□□□ -0.39
CCDC65-202ENST00000320516 ECE2O60344 883 aa12.58□□□□□ -0.39
CCDC65-202ENST00000320516 IGHMBP2P38935 993 aaKnown RBP12.58□□□□□ -0.39
CCDC65-202ENST00000320516 GMPSP49915 693 aaPredicted RBP12.58□□□□□ -0.39
CCDC65-202ENST00000320516 TNIP1Q15025 636 aa12.58□□□□□ -0.39
CCDC65-202ENST00000320516 DOK7Q18PE1 504 aa12.58□□□□□ -0.39
CCDC65-202ENST00000320516 KCNQ5Q9NR82 932 aa12.58□□□□□ -0.39
CCDC65-202ENST00000320516 SPEF2Q9C093 1822 aa12.58□□□□□ -0.4
CCDC65-202ENST00000320516 ATP2B4P23634 1241 aa12.58□□□□□ -0.4
CCDC65-202ENST00000320516 BRPF1P55201 1214 aaPredicted RBP12.58□□□□□ -0.4
CCDC65-202ENST00000320516 USP50Q70EL3 339 aaPredicted RBP12.58□□□□□ -0.4
CCDC65-202ENST00000320516 KAZALD1Q96I82 304 aa12.58□□□□□ -0.4
CCDC65-202ENST00000320516 ADARB2Q9NS39 739 aaKnown RBP12.58□□□□□ -0.4
CCDC65-202ENST00000320516 C9orf78Q9NZ63 289 aaPredicted RBP12.58□□□□□ -0.4
CCDC65-202ENST00000320516 SCN9AQ15858 1988 aa12.57□□□□□ -0.4
CCDC65-202ENST00000320516 ANKRD18BA2A2Z9 1011 aa12.57□□□□□ -0.4
CCDC65-202ENST00000320516 PSMD14O00487 310 aa12.57□□□□□ -0.4
CCDC65-202ENST00000320516 NBPF7P0C2Y1 421 aaPredicted RBP12.57□□□□□ -0.4
CCDC65-202ENST00000320516 LMBR1LQ6UX01 489 aa12.57□□□□□ -0.4
CCDC65-202ENST00000320516 SMC4Q9NTJ3 1288 aa12.57□□□□□ -0.4
CCDC65-202ENST00000320516 CLEC11AQ9Y240 323 aa12.57□□□□□ -0.4
CCDC65-202ENST00000320516 CCT4P50991 539 aaKnown RBP12.56□□□□□ -0.4
CCDC65-202ENST00000320516 IFIT5Q13325 482 aaKnown RBP12.56□□□□□ -0.4
CCDC65-202ENST00000320516 MAP1SQ66K74 1059 aaPredicted RBP12.56□□□□□ -0.4
CCDC65-202ENST00000320516 CNTROBQ8N137 903 aa12.56□□□□□ -0.4
CCDC65-202ENST00000320516 DPF2Q92785 391 aa12.56□□□□□ -0.4
CCDC65-202ENST00000320516 SUCLG2Q96I99 432 aa12.56□□□□□ -0.4
CCDC65-202ENST00000320516 ZBTB12Q9Y330 459 aaPredicted RBP12.56□□□□□ -0.4
CCDC65-202ENST00000320516 MED23Q9ULK4 1368 aa12.56□□□□□ -0.4
CCDC65-202ENST00000320516 SHTN1A0MZ66 631 aa12.56□□□□□ -0.4
CCDC65-202ENST00000320516 KLRG1Q96E93 195 aa12.56□□□□□ -0.4
CCDC65-202ENST00000320516 MPHOSPH8Q99549 860 aa12.56□□□□□ -0.4
CCDC65-202ENST00000320516 LEMD3Q9Y2U8 911 aa12.56□□□□□ -0.4
CCDC65-202ENST00000320516 VIL1P09327 827 aaKnown RBP12.55□□□□□ -0.4
CCDC65-202ENST00000320516 RARSP54136 660 aaKnown RBP12.55□□□□□ -0.4
CCDC65-202ENST00000320516 CHRNDQ07001 517 aa12.55□□□□□ -0.4
CCDC65-202ENST00000320516 ANKRD2Q9GZV1 360 aa12.55□□□□□ -0.4
CCDC65-202ENST00000320516 CNOT7Q9UIV1 285 aaKnown RBP12.55□□□□□ -0.4
CCDC65-202ENST00000320516 CHMP3Q9Y3E7 222 aa12.55□□□□□ -0.4
CCDC65-202ENST00000320516 ZNF609O15014 1411 aa12.55□□□□□ -0.4
CCDC65-202ENST00000320516 RPS12P25398 132 aaKnown RBP12.54□□□□□ -0.4
CCDC65-202ENST00000320516 HIRAP54198 1017 aaPredicted RBP12.54□□□□□ -0.4
CCDC65-202ENST00000320516 RABL6Q3YEC7 729 aaPredicted RBP12.54□□□□□ -0.4
CCDC65-202ENST00000320516 PODNQ7Z5L7 613 aa12.54□□□□□ -0.4
CCDC65-202ENST00000320516 TXNRD3Q86VQ6 643 aa12.54□□□□□ -0.4
CCDC65-202ENST00000320516 USP44Q9H0E7 712 aa12.54□□□□□ -0.4
CCDC65-202ENST00000320516 CREBZFQ9NS37 354 aa12.54□□□□□ -0.4
CCDC65-202ENST00000320516 PGAP2Q9UHJ9 254 aa12.54□□□□□ -0.4
CCDC65-202ENST00000320516 ZNF804BA4D1E1 1349 aa12.54□□□□□ -0.4
CCDC65-202ENST00000320516 PSME4Q14997 1843 aa12.54□□□□□ -0.4
CCDC65-202ENST00000320516 CCDC57Q2TAC2 916 aa12.53□□□□□ -0.4
CCDC65-202ENST00000320516 MICALL2Q8IY33 904 aa12.53□□□□□ -0.4
CCDC65-202ENST00000320516 TRPM4Q8TD43 1214 aa12.53□□□□□ -0.4
CCDC65-202ENST00000320516 ZNF594Q96JF6 807 aaPredicted RBP12.53□□□□□ -0.4
CCDC65-202ENST00000320516 NOB1Q9ULX3 412 aaKnown RBP12.53□□□□□ -0.4
CCDC65-202ENST00000320516 IRS2Q9Y4H2 1338 aa12.53□□□□□ -0.4
CCDC65-202ENST00000320516 G3V3G9 751 aa12.53□□□□□ -0.4
CCDC65-202ENST00000320516 KLRK1P26718 216 aa12.53□□□□□ -0.4
CCDC65-202ENST00000320516 HNRNPUQ00839 825 aaKnown RBP eCLIP12.53□□□□□ -0.4
CCDC65-202ENST00000320516 DCAF8Q5TAQ9 597 aa12.53□□□□□ -0.4
CCDC65-202ENST00000320516 ANKRD44Q8N8A2 993 aa12.53□□□□□ -0.4
CCDC65-202ENST00000320516 JMYQ8N9B5 988 aa12.53□□□□□ -0.4
CCDC65-202ENST00000320516 BICC1Q9H694 974 aaKnown RBP12.53□□□□□ -0.4
CCDC65-202ENST00000320516 A0A1B0GUL6 1792 aa12.52□□□□□ -0.4
CCDC65-202ENST00000320516 H7C1D1 291 aa12.52□□□□□ -0.41
CCDC65-202ENST00000320516 SNAP23O00161 211 aa12.52□□□□□ -0.41
CCDC65-202ENST00000320516 RSBN1LQ6PCB5 846 aaPredicted RBP12.52□□□□□ -0.41
CCDC65-202ENST00000320516 ZC3H15Q8WU90 426 aaKnown RBP12.52□□□□□ -0.41
CCDC65-202ENST00000320516 GMLQ99445 158 aa12.52□□□□□ -0.41
CCDC65-202ENST00000320516 PCNTO95613 3336 aa12.51□□□□□ -0.41
CCDC65-202ENST00000320516 TAF5LO75529 589 aa12.51□□□□□ -0.41
CCDC65-202ENST00000320516 EGFRP00533 1210 aa12.51□□□□□ -0.41
CCDC65-202ENST00000320516 LDHAL6AQ6ZMR3 332 aa12.51□□□□□ -0.41
CCDC65-202ENST00000320516 C15orf52Q6ZUT6 534 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms