RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 EIF3CQ99613 913 aaKnown RBP17.46■□□□□ 0.39
SCAP-202ENST00000320017 PHACTR2O75167 634 aa17.46■□□□□ 0.38
SCAP-202ENST00000320017 ATP2B1P20020 1258 aa17.46■□□□□ 0.38
SCAP-202ENST00000320017 SFPQP23246 707 aaKnown RBP eCLIP17.46■□□□□ 0.38
SCAP-202ENST00000320017 CCDC91Q7Z6B0 441 aa17.46■□□□□ 0.38
SCAP-202ENST00000320017 ZRANB2O95218 330 aaKnown RBP eCLIP17.45■□□□□ 0.383e-10■■□□□ 14.4
SCAP-202ENST00000320017 NBPF7P0C2Y1 421 aaPredicted RBP17.45■□□□□ 0.38
SCAP-202ENST00000320017 MAGEA9P43362 315 aa17.45■□□□□ 0.38
SCAP-202ENST00000320017 TAF7Q15545 349 aaPredicted RBP17.45■□□□□ 0.38
SCAP-202ENST00000320017 ZRSR1Q15695 479 aaKnown RBP17.45■□□□□ 0.38
SCAP-202ENST00000320017 JAKMIP1Q96N16 626 aaKnown RBP17.45■□□□□ 0.38
SCAP-202ENST00000320017 CLSTN2Q9H4D0 955 aa17.45■□□□□ 0.38
SCAP-202ENST00000320017 FER1L4A9Z1Z3 1794 aa17.45■□□□□ 0.38
SCAP-202ENST00000320017 AATKQ6ZMQ8 1374 aa17.45■□□□□ 0.38
SCAP-202ENST00000320017 IVLP07476 585 aa17.45■□□□□ 0.38
SCAP-202ENST00000320017 MICALL1Q8N3F8 863 aa17.45■□□□□ 0.38
SCAP-202ENST00000320017 PA2G4Q9UQ80 394 aaKnown RBP17.45■□□□□ 0.38
SCAP-202ENST00000320017 C3P01024 1663 aa17.45■□□□□ 0.38
SCAP-202ENST00000320017 KCNQ3O43525 872 aa17.44■□□□□ 0.38
SCAP-202ENST00000320017 MNAT1P51948 309 aa17.44■□□□□ 0.38
SCAP-202ENST00000320017 CCDC30Q5VVM6 783 aa17.44■□□□□ 0.38
SCAP-202ENST00000320017 NBPF6Q5VWK0 638 aa17.44■□□□□ 0.38
SCAP-202ENST00000320017 RASEFQ8IZ41 740 aa17.44■□□□□ 0.38
SCAP-202ENST00000320017 NBPF4Q96M43 638 aa17.44■□□□□ 0.38
SCAP-202ENST00000320017 SIL1Q9H173 461 aa17.44■□□□□ 0.38
SCAP-202ENST00000320017 ATG3Q9NT62 314 aa17.44■□□□□ 0.38
SCAP-202ENST00000320017 RIMS1Q86UR5 1692 aaKnown RBP17.44■□□□□ 0.38
SCAP-202ENST00000320017 A0A0G2JS52 829 aa17.44■□□□□ 0.38
SCAP-202ENST00000320017 GCP02774 474 aa17.44■□□□□ 0.38
SCAP-202ENST00000320017 SNX14Q9Y5W7 946 aa17.44■□□□□ 0.38
SCAP-202ENST00000320017 AOPEPQ8N6M6 819 aa17.44■□□□□ 0.38
SCAP-202ENST00000320017 CXorf56Q9H5V9 222 aa17.44■□□□□ 0.38
SCAP-202ENST00000320017 ELP1O95163 1332 aa17.43■□□□□ 0.38
SCAP-202ENST00000320017 TBC1D8O95759 1140 aa17.43■□□□□ 0.38
SCAP-202ENST00000320017 GNAI3P08754 354 aa17.43■□□□□ 0.38
SCAP-202ENST00000320017 TDO2P48775 406 aa17.43■□□□□ 0.38
SCAP-202ENST00000320017 STK3Q13188 491 aa17.43■□□□□ 0.38
SCAP-202ENST00000320017 E4F1Q66K89 784 aaPredicted RBP17.43■□□□□ 0.38
SCAP-202ENST00000320017 ZNF530Q6P9A1 599 aaPredicted RBP17.43■□□□□ 0.38
SCAP-202ENST00000320017 USP44Q9H0E7 712 aa17.43■□□□□ 0.38
SCAP-202ENST00000320017 L2HGDHQ9H9P8 463 aa17.43■□□□□ 0.38
SCAP-202ENST00000320017 TEFQ10587 303 aa17.43■□□□□ 0.38
SCAP-202ENST00000320017 DNAJC21Q5F1R6 531 aaKnown RBP17.43■□□□□ 0.38
SCAP-202ENST00000320017 ISM2Q6H9L7 571 aa17.43■□□□□ 0.38
SCAP-202ENST00000320017 ANKRD20A12PQ8NF67 263 aa17.43■□□□□ 0.38
SCAP-202ENST00000320017 PPM1EQ8WY54 764 aa17.43■□□□□ 0.38
SCAP-202ENST00000320017 EXOC4Q96A65 974 aa17.43■□□□□ 0.38
SCAP-202ENST00000320017 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.43■□□□□ 0.38
SCAP-202ENST00000320017 CDC42BPGQ6DT37 1551 aa17.42■□□□□ 0.38
SCAP-202ENST00000320017 GNAT3A8MTJ3 354 aa17.42■□□□□ 0.38
SCAP-202ENST00000320017 HSPA4P34932 840 aa17.42■□□□□ 0.38
SCAP-202ENST00000320017 CC2D1AQ6P1N0 951 aaPredicted RBP17.42■□□□□ 0.38
SCAP-202ENST00000320017 REXO1L1PQ8IX06 675 aa17.42■□□□□ 0.38
SCAP-202ENST00000320017 DNAAF4Q8WXU2 420 aa17.42■□□□□ 0.38
SCAP-202ENST00000320017 PI4KAP2A4QPH2 592 aa17.42■□□□□ 0.38
SCAP-202ENST00000320017 ATP8B2P98198 1209 aa17.42■□□□□ 0.38
SCAP-202ENST00000320017 PI4KAP1Q8N8J0 262 aa17.42■□□□□ 0.38
SCAP-202ENST00000320017 IL17REQ8NFR9 667 aa17.42■□□□□ 0.38
SCAP-202ENST00000320017 MRFAP1L1Q96HT8 127 aa17.42■□□□□ 0.38
SCAP-202ENST00000320017 MAP2K2P36507 400 aa17.41■□□□□ 0.38
SCAP-202ENST00000320017 PRPF40BQ6NWY9 871 aaKnown RBP17.41■□□□□ 0.38
SCAP-202ENST00000320017 GSDMDP57764 484 aa17.41■□□□□ 0.38
SCAP-202ENST00000320017 CCDC102AQ96A19 550 aa17.41■□□□□ 0.38
SCAP-202ENST00000320017 SCAND2PQ9GZW5 306 aaPredicted RBP17.41■□□□□ 0.38
SCAP-202ENST00000320017 LGR6Q9HBX8 967 aa17.41■□□□□ 0.38
SCAP-202ENST00000320017 IBSPP21815 317 aaPredicted RBP17.41■□□□□ 0.38
SCAP-202ENST00000320017 NPHP4O75161 1426 aaPredicted RBP17.41■□□□□ 0.38
SCAP-202ENST00000320017 NPHP3Q7Z494 1330 aa17.41■□□□□ 0.38
SCAP-202ENST00000320017 PLEKHG2Q9H7P9 1386 aa17.4■□□□□ 0.38
SCAP-202ENST00000320017 CDC25BP30305 580 aa17.4■□□□□ 0.38
SCAP-202ENST00000320017 SBNO1A3KN83 1393 aa17.4■□□□□ 0.38
SCAP-202ENST00000320017 H3BQF6 201 aa17.4■□□□□ 0.38
SCAP-202ENST00000320017 CHPF2Q9P2E5 772 aa17.4■□□□□ 0.38
SCAP-202ENST00000320017 USP32Q8NFA0 1604 aa17.4■□□□□ 0.38
SCAP-202ENST00000320017 ETF1P62495 437 aaKnown RBP17.4■□□□□ 0.38
SCAP-202ENST00000320017 C19orf44Q9H6X5 657 aa17.4■□□□□ 0.38
SCAP-202ENST00000320017 PDE11AQ9HCR9 933 aa17.4■□□□□ 0.38
SCAP-202ENST00000320017 CDK12Q9NYV4 1490 aaPredicted RBP17.4■□□□□ 0.38
SCAP-202ENST00000320017 STX1AQ16623 288 aa17.39■□□□□ 0.37
SCAP-202ENST00000320017 RHPN1Q8TCX5 695 aa17.39■□□□□ 0.37
SCAP-202ENST00000320017 LEO1Q8WVC0 666 aaPredicted RBP17.39■□□□□ 0.37
SCAP-202ENST00000320017 SOS1Q07889 1333 aaPredicted RBP17.39■□□□□ 0.37
SCAP-202ENST00000320017 PIP4K2AP48426 406 aaPredicted RBP17.39■□□□□ 0.37
SCAP-202ENST00000320017 MCTP2Q6DN12 878 aa17.39■□□□□ 0.37
SCAP-202ENST00000320017 TADA3O75528 432 aa17.38■□□□□ 0.37
SCAP-202ENST00000320017 C1orf141Q5JVX7 400 aa17.38■□□□□ 0.37
SCAP-202ENST00000320017 ANKRD24Q8TF21 1146 aa17.38■□□□□ 0.37
SCAP-202ENST00000320017 CCDC8Q9H0W5 538 aaPredicted RBP17.38■□□□□ 0.37
SCAP-202ENST00000320017 SUFUQ9UMX1 484 aa17.38■□□□□ 0.37
SCAP-202ENST00000320017 NDUFB9Q9Y6M9 179 aa17.38■□□□□ 0.37
SCAP-202ENST00000320017 CEP170BQ9Y4F5 1589 aaPredicted RBP17.38■□□□□ 0.37
SCAP-202ENST00000320017 TPM1P09493 284 aa17.38■□□□□ 0.37
SCAP-202ENST00000320017 COL9A3Q14050 684 aaPredicted RBP17.38■□□□□ 0.37
SCAP-202ENST00000320017 CCDC158Q5M9N0 1113 aa17.38■□□□□ 0.37
SCAP-202ENST00000320017 CEP57L1Q8IYX8 460 aa17.38■□□□□ 0.37
SCAP-202ENST00000320017 C9orf78Q9NZ63 289 aaPredicted RBP17.38■□□□□ 0.37
SCAP-202ENST00000320017 HSP90B2PQ58FF3 399 aa17.38■□□□□ 0.37
SCAP-202ENST00000320017 DDX11Q96FC9 970 aa17.38■□□□□ 0.37
SCAP-202ENST00000320017 IFNKQ9P0W0 207 aa17.38■□□□□ 0.37
SCAP-202ENST00000320017 OVOS2A0A0J9YW53 1432 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms