RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 MPHOSPH8Q99549 860 aa12.18□□□□□ -0.46
CHRNA9-201ENST00000310169 RNF181Q9P0P0 153 aa12.18□□□□□ -0.46
CHRNA9-201ENST00000310169 FER1L6Q2WGJ9 1857 aa12.18□□□□□ -0.46
CHRNA9-201ENST00000310169 PLIN1O60240 522 aa12.17□□□□□ -0.46
CHRNA9-201ENST00000310169 GNAI3P08754 354 aa12.17□□□□□ -0.46
CHRNA9-201ENST00000310169 FKBP4Q02790 459 aaKnown RBP eCLIP12.17□□□□□ -0.46
CHRNA9-201ENST00000310169 EPHA10Q5JZY3 1008 aa12.17□□□□□ -0.46
CHRNA9-201ENST00000310169 C9orf131Q5VYM1 1079 aa12.17□□□□□ -0.46
CHRNA9-201ENST00000310169 DPP8Q6V1X1 898 aaPredicted RBP12.17□□□□□ -0.46
CHRNA9-201ENST00000310169 FAM43AQ8N2R8 423 aa12.17□□□□□ -0.46
CHRNA9-201ENST00000310169 MPNDQ8N594 471 aa12.17□□□□□ -0.46
CHRNA9-201ENST00000310169 BICC1Q9H694 974 aaKnown RBP12.17□□□□□ -0.46
CHRNA9-201ENST00000310169 NSFL1CQ9UNZ2 370 aaKnown RBP12.17□□□□□ -0.46
CHRNA9-201ENST00000310169 SBF1O95248 1867 aa12.17□□□□□ -0.46
CHRNA9-201ENST00000310169 MEIS3Q99687 375 aa12.17□□□□□ -0.46
CHRNA9-201ENST00000310169 ZMYND15Q9H091 742 aa12.17□□□□□ -0.46
CHRNA9-201ENST00000310169 ANKIB1Q9P2G1 1089 aa12.17□□□□□ -0.46
CHRNA9-201ENST00000310169 AAMPQ13685 434 aa12.16□□□□□ -0.46
CHRNA9-201ENST00000310169 RTL9Q8NET4 1388 aa12.16□□□□□ -0.46
CHRNA9-201ENST00000310169 NFKBIBQ15653 356 aa12.16□□□□□ -0.46
CHRNA9-201ENST00000310169 PANK1Q8TE04 598 aa12.16□□□□□ -0.46
CHRNA9-201ENST00000310169 KAZALD1Q96I82 304 aa12.16□□□□□ -0.46
CHRNA9-201ENST00000310169 ZNF277Q9NRM2 450 aaPredicted RBP12.16□□□□□ -0.46
CHRNA9-201ENST00000310169 BSDC1Q9NW68 430 aaPredicted RBP12.16□□□□□ -0.46
CHRNA9-201ENST00000310169 RLBP1P12271 317 aa12.15□□□□□ -0.46
CHRNA9-201ENST00000310169 SLC51AQ86UW1 340 aa12.15□□□□□ -0.46
CHRNA9-201ENST00000310169 SUPT20HQ8NEM7 779 aa12.15□□□□□ -0.46
CHRNA9-201ENST00000310169 PSMD1Q99460 953 aa12.15□□□□□ -0.46
CHRNA9-201ENST00000310169 LTBP3Q9NS15 1303 aa12.15□□□□□ -0.46
CHRNA9-201ENST00000310169 SPEF2Q9C093 1822 aa12.15□□□□□ -0.47
CHRNA9-201ENST00000310169 C6orf229H3BNL8 230 aa12.14□□□□□ -0.47
CHRNA9-201ENST00000310169 FGD1P98174 961 aa12.14□□□□□ -0.47
CHRNA9-201ENST00000310169 LRRFIP2Q9Y608 721 aaKnown RBP12.14□□□□□ -0.47
CHRNA9-201ENST00000310169 LDHAL6AQ6ZMR3 332 aa12.14□□□□□ -0.47
CHRNA9-201ENST00000310169 GNAI2P04899 355 aa12.13□□□□□ -0.47
CHRNA9-201ENST00000310169 IARSP41252 1262 aaKnown RBP12.13□□□□□ -0.47
CHRNA9-201ENST00000310169 GPSM2P81274 684 aa12.13□□□□□ -0.47
CHRNA9-201ENST00000310169 RABL6Q3YEC7 729 aaPredicted RBP12.13□□□□□ -0.47
CHRNA9-201ENST00000310169 JDP2Q8WYK2 163 aa12.13□□□□□ -0.47
CHRNA9-201ENST00000310169 ZNF594Q96JF6 807 aaPredicted RBP12.13□□□□□ -0.47
CHRNA9-201ENST00000310169 CNNM1Q9NRU3 951 aa12.13□□□□□ -0.47
CHRNA9-201ENST00000310169 LARGE2Q8N3Y3 721 aa12.13□□□□□ -0.47
CHRNA9-201ENST00000310169 ANKRD44Q8N8A2 993 aa12.13□□□□□ -0.47
CHRNA9-201ENST00000310169 MINPP1Q9UNW1 487 aa12.13□□□□□ -0.47
CHRNA9-201ENST00000310169 COL4A1P02462 1669 aa12.12□□□□□ -0.47
CHRNA9-201ENST00000310169 PPIP5K2O43314 1243 aa12.12□□□□□ -0.47
CHRNA9-201ENST00000310169 PRELPP51888 382 aa12.12□□□□□ -0.47
CHRNA9-201ENST00000310169 GGA1Q9UJY5 639 aa12.12□□□□□ -0.47
CHRNA9-201ENST00000310169 COG6Q9Y2V7 657 aa12.12□□□□□ -0.47
CHRNA9-201ENST00000310169 XDHP47989 1333 aa12.12□□□□□ -0.47
CHRNA9-201ENST00000310169 UFL1O94874 794 aa12.12□□□□□ -0.47
CHRNA9-201ENST00000310169 WASHC4Q2M389 1173 aa12.12□□□□□ -0.47
CHRNA9-201ENST00000310169 ZNF526Q8TF50 670 aaPredicted RBP12.12□□□□□ -0.47
CHRNA9-201ENST00000310169 RTFDC1Q9BY42 306 aaPredicted RBP12.12□□□□□ -0.47
CHRNA9-201ENST00000310169 ANKRD2Q9GZV1 360 aa12.12□□□□□ -0.47
CHRNA9-201ENST00000310169 DICER1Q9UPY3 1922 aaKnown RBP12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 G3V3G9 751 aa12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 PDE3AQ14432 1141 aa12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 MVPQ14764 893 aaKnown RBP12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 AOC3Q16853 763 aa12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 DCAF8Q5TAQ9 597 aa12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 CRBNQ96SW2 442 aa12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 EYA3Q99504 573 aa12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 ZC3H12CQ9C0D7 883 aaKnown RBP12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 VPS33BQ9H267 617 aa12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 POLLQ9UGP5 575 aa12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 LRRC37AA6NMS7 1700 aa12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 RIMBP2O15034 1052 aa12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 ZBTB7BO15156 539 aaPredicted RBP12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 KCNJ4P48050 445 aa12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 DPY19L2Q6NUT2 758 aa12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 TBC1D16Q8TBP0 767 aa12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 CHMP4BQ9H444 224 aaKnown RBP12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 DDX19BQ9UMR2 479 aa12.11□□□□□ -0.47
CHRNA9-201ENST00000310169 SRGAP3O43295 1099 aa12.1□□□□□ -0.47
CHRNA9-201ENST00000310169 ATP2B4P23634 1241 aa12.1□□□□□ -0.47
CHRNA9-201ENST00000310169 CHRNDQ07001 517 aa12.1□□□□□ -0.47
CHRNA9-201ENST00000310169 NIM1KQ8IY84 436 aa12.1□□□□□ -0.47
CHRNA9-201ENST00000310169 KLHDC4Q8TBB5 520 aa12.1□□□□□ -0.47
CHRNA9-201ENST00000310169 SNED1Q8TER0 1413 aa12.1□□□□□ -0.47
CHRNA9-201ENST00000310169 ZC3H4Q9UPT8 1303 aaKnown RBP12.1□□□□□ -0.47
CHRNA9-201ENST00000310169 A0A0U1RQG5 324 aaPredicted RBP12.09□□□□□ -0.47
CHRNA9-201ENST00000310169 C20orf194Q5TEA3 1177 aa12.09□□□□□ -0.47
CHRNA9-201ENST00000310169 HELBQ8NG08 1087 aaPredicted RBP12.09□□□□□ -0.47
CHRNA9-201ENST00000310169 C1orf115Q9H7X2 142 aa12.09□□□□□ -0.47
CHRNA9-201ENST00000310169 TAF5LO75529 589 aa12.09□□□□□ -0.47
CHRNA9-201ENST00000310169 KIAA2012Q0VF49 1180 aa12.09□□□□□ -0.47
CHRNA9-201ENST00000310169 C8orf34Q49A92 452 aa12.09□□□□□ -0.47
CHRNA9-201ENST00000310169 L1TD1Q5T7N2 865 aaKnown RBP12.09□□□□□ -0.47
CHRNA9-201ENST00000310169 EIF6P56537 245 aaKnown RBP12.08□□□□□ -0.48
CHRNA9-201ENST00000310169 ZNF784Q8NCA9 323 aaPredicted RBP12.08□□□□□ -0.48
CHRNA9-201ENST00000310169 GPR101Q96P66 508 aaPredicted RBP12.08□□□□□ -0.48
CHRNA9-201ENST00000310169 PUS3Q9BZE2 481 aaKnown RBP12.08□□□□□ -0.48
CHRNA9-201ENST00000310169 SIL1Q9H173 461 aa12.08□□□□□ -0.48
CHRNA9-201ENST00000310169 GPBP1L1Q9HC44 474 aaPredicted RBP12.08□□□□□ -0.48
CHRNA9-201ENST00000310169 LEMD3Q9Y2U8 911 aa12.08□□□□□ -0.48
CHRNA9-201ENST00000310169 METTL24Q5JXM2 366 aa12.08□□□□□ -0.48
CHRNA9-201ENST00000310169 TIAM2Q8IVF5 1701 aa12.08□□□□□ -0.48
CHRNA9-201ENST00000310169 ZNF804BA4D1E1 1349 aa12.07□□□□□ -0.48
CHRNA9-201ENST00000310169 MROH5Q6ZUA9 1318 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms