RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 KIF15Q9NS87 1388 aa7.27□□□□□ -1.25
CKS1B-201ENST00000308987 TMEM2Q9UHN6 1383 aa7.27□□□□□ -1.25
CKS1B-201ENST00000308987 NWD1Q149M9 1564 aa7.27□□□□□ -1.25
CKS1B-201ENST00000308987 FAM135BQ49AJ0 1406 aa7.27□□□□□ -1.25
CKS1B-201ENST00000308987 M0R082 166 aa7.26□□□□□ -1.25
CKS1B-201ENST00000308987 INHAP05111 366 aa7.26□□□□□ -1.25
CKS1B-201ENST00000308987 H2AFB1P0C5Y9 115 aa7.26□□□□□ -1.25
CKS1B-201ENST00000308987 H2AFB2P0C5Z0 115 aa7.26□□□□□ -1.25
CKS1B-201ENST00000308987 SCNN1DP51172 638 aa7.26□□□□□ -1.25
CKS1B-201ENST00000308987 IDI1Q13907 227 aa7.26□□□□□ -1.25
CKS1B-201ENST00000308987 PHTF2Q8N3S3 785 aa7.26□□□□□ -1.25
CKS1B-201ENST00000308987 ZNF417Q8TAU3 575 aa7.26□□□□□ -1.25
CKS1B-201ENST00000308987 ZNF587Q96SQ5 575 aaPredicted RBP7.26□□□□□ -1.25
CKS1B-201ENST00000308987 DOLKQ9UPQ8 538 aa7.26□□□□□ -1.25
CKS1B-201ENST00000308987 GJA3Q9Y6H8 435 aa7.26□□□□□ -1.25
CKS1B-201ENST00000308987 EFCAB6Q5THR3 1501 aa7.26□□□□□ -1.25
CKS1B-201ENST00000308987 LMTK2Q8IWU2 1503 aa7.26□□□□□ -1.25
CKS1B-201ENST00000308987 ERBINQ96RT1 1412 aa7.26□□□□□ -1.25
CKS1B-201ENST00000308987 GCC2Q8IWJ2 1684 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 TMEM94Q12767 1356 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 PHLPP1O60346 1717 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 EFSO43281 561 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 SMTNP53814 917 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 GDF10P55107 478 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 LAMC2Q13753 1193 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 NBPF1Q3BBV0 1214 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 C8orf86Q6ZUL3 223 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 ZNF295-AS1Q8N0V1 137 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 IL27Q8NEV9 243 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 GOPCQ9HD26 462 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 PRDM6Q9NQX0 595 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 RRP7BPQ9NSQ0 103 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 STARD13Q9Y3M8 1113 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 ADGRB3O60242 1522 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 NOS1P29475 1434 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 DAPK1P53355 1430 aa7.25□□□□□ -1.25
CKS1B-201ENST00000308987 ADARB2-AS1A8MUL3 147 aa7.24□□□□□ -1.25
CKS1B-201ENST00000308987 TATP17735 454 aaPredicted RBP7.24□□□□□ -1.25
CKS1B-201ENST00000308987 NEUROD2Q15784 382 aa7.24□□□□□ -1.25
CKS1B-201ENST00000308987 SAMD5Q5TGI4 173 aa7.24□□□□□ -1.25
CKS1B-201ENST00000308987 MICALL1Q8N3F8 863 aa7.24□□□□□ -1.25
CKS1B-201ENST00000308987 SLC26A8Q96RN1 970 aa7.24□□□□□ -1.25
CKS1B-201ENST00000308987 TMEM131LA2VDJ0 1609 aa7.23□□□□□ -1.25
CKS1B-201ENST00000308987 COL16A1Q07092 1604 aaPredicted RBP7.23□□□□□ -1.25
CKS1B-201ENST00000308987 C9orf172C9J069 976 aa7.23□□□□□ -1.25
CKS1B-201ENST00000308987 SIN3BO75182 1162 aa7.23□□□□□ -1.25
CKS1B-201ENST00000308987 KCNA6P17658 529 aa7.23□□□□□ -1.25
CKS1B-201ENST00000308987 OXLD1Q5BKU9 147 aa7.23□□□□□ -1.25
CKS1B-201ENST00000308987 ZDHHC3Q9NYG2 299 aa7.23□□□□□ -1.25
CKS1B-201ENST00000308987 ZFYVE9O95405 1425 aa7.23□□□□□ -1.25
CKS1B-201ENST00000308987 FGD6Q6ZV73 1430 aa7.23□□□□□ -1.25
CKS1B-201ENST00000308987 EP400Q96L91 3159 aa7.23□□□□□ -1.25
CKS1B-201ENST00000308987 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.22□□□□□ -1.25
CKS1B-201ENST00000308987 ALBP02768 609 aa7.22□□□□□ -1.25
CKS1B-201ENST00000308987 NID1P14543 1247 aa7.22□□□□□ -1.25
CKS1B-201ENST00000308987 ADGRE1Q14246 886 aa7.22□□□□□ -1.25
CKS1B-201ENST00000308987 CHIC2Q9UKJ5 165 aa7.22□□□□□ -1.25
CKS1B-201ENST00000308987 NDUFB9Q9Y6M9 179 aa7.22□□□□□ -1.25
CKS1B-201ENST00000308987 NKTRP30414 1462 aaKnown RBP7.22□□□□□ -1.25
CKS1B-201ENST00000308987 E9PCH4 1651 aa7.22□□□□□ -1.25
CKS1B-201ENST00000308987 LRP6O75581 1613 aa7.21□□□□□ -1.26
CKS1B-201ENST00000308987 CDK2AP1O14519 115 aa7.21□□□□□ -1.26
CKS1B-201ENST00000308987 SELPP16109 830 aa7.21□□□□□ -1.26
CKS1B-201ENST00000308987 MBTPS1Q14703 1052 aa7.21□□□□□ -1.26
CKS1B-201ENST00000308987 PROSER2Q86WR7 435 aaPredicted RBP7.21□□□□□ -1.26
CKS1B-201ENST00000308987 SIRT1Q96EB6 747 aa7.21□□□□□ -1.26
CKS1B-201ENST00000308987 BCANQ96GW7 911 aa7.21□□□□□ -1.26
CKS1B-201ENST00000308987 SERTAD1Q9UHV2 236 aa7.21□□□□□ -1.26
CKS1B-201ENST00000308987 IQSEC3Q9UPP2 1182 aaPredicted RBP7.21□□□□□ -1.26
CKS1B-201ENST00000308987 EID1Q9Y6B2 187 aa7.21□□□□□ -1.26
CKS1B-201ENST00000308987 ADGRL2O95490 1459 aa7.21□□□□□ -1.26
CKS1B-201ENST00000308987 SLFNL1Q499Z3 407 aa7.2□□□□□ -1.26
CKS1B-201ENST00000308987 TRAPPC3LQ5T215 181 aa7.2□□□□□ -1.26
CKS1B-201ENST00000308987 BICDL1Q6ZP65 573 aa7.2□□□□□ -1.26
CKS1B-201ENST00000308987 MTMR14Q8NCE2 650 aa7.2□□□□□ -1.26
CKS1B-201ENST00000308987 CABP1Q9NZU7 370 aa7.2□□□□□ -1.26
CKS1B-201ENST00000308987 USP3Q9Y6I4 520 aa7.2□□□□□ -1.26
CKS1B-201ENST00000308987 SHPRHQ149N8 1683 aa7.19□□□□□ -1.26
CKS1B-201ENST00000308987 SLC24A1O60721 1099 aa7.19□□□□□ -1.26
CKS1B-201ENST00000308987 TXNRD3Q86VQ6 643 aa7.19□□□□□ -1.26
CKS1B-201ENST00000308987 TNFRSF25Q93038 417 aa7.19□□□□□ -1.26
CKS1B-201ENST00000308987 SLC4A9Q96Q91 983 aa7.19□□□□□ -1.26
CKS1B-201ENST00000308987 PARP3Q9Y6F1 533 aa7.19□□□□□ -1.26
CKS1B-201ENST00000308987 KANK1Q14678 1352 aa7.19□□□□□ -1.26
CKS1B-201ENST00000308987 ADAMTS13Q76LX8 1427 aa7.18□□□□□ -1.26
CKS1B-201ENST00000308987 UNC13BO14795 1591 aa7.18□□□□□ -1.26
CKS1B-201ENST00000308987 DIP2AQ14689 1571 aa7.18□□□□□ -1.26
CKS1B-201ENST00000308987 A6NJY4 79 aa7.18□□□□□ -1.26
CKS1B-201ENST00000308987 MTFR1Q15390 333 aa7.18□□□□□ -1.26
CKS1B-201ENST00000308987 MCTP1Q6DN14 999 aa7.18□□□□□ -1.26
CKS1B-201ENST00000308987 C20orf204Q6ZNR8 217 aa7.18□□□□□ -1.26
CKS1B-201ENST00000308987 BANK1Q8NDB2 785 aa7.18□□□□□ -1.26
CKS1B-201ENST00000308987 CCER1Q8TC90 406 aaPredicted RBP7.18□□□□□ -1.26
CKS1B-201ENST00000308987 TP53INP1Q96A56 240 aa7.18□□□□□ -1.26
CKS1B-201ENST00000308987 SLC30A3Q99726 388 aa7.18□□□□□ -1.26
CKS1B-201ENST00000308987 SLAIN2Q9P270 581 aa7.18□□□□□ -1.26
CKS1B-201ENST00000308987 AHDC1Q5TGY3 1603 aaPredicted RBP7.18□□□□□ -1.26
CKS1B-201ENST00000308987 NRXN3Q9Y4C0 1643 aa7.18□□□□□ -1.26
CKS1B-201ENST00000308987 ANKRD30AQ9BXX3 1397 aa7.18□□□□□ -1.26
CKS1B-201ENST00000308987 PLEKHG1Q9ULL1 1385 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms