RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ZNF646O15015 1829 aaPredicted RBP25.28■■□□□ 1.64
PDZRN3-202ENST00000308537 C6orf229H3BNL8 230 aa25.28■■□□□ 1.64
PDZRN3-202ENST00000308537 GMPSP49915 693 aaPredicted RBP25.28■■□□□ 1.64
PDZRN3-202ENST00000308537 ANKRD18AQ8IVF6 992 aa25.28■■□□□ 1.64
PDZRN3-202ENST00000308537 JMYQ8N9B5 988 aa25.28■■□□□ 1.64
PDZRN3-202ENST00000308537 KCNQ5Q9NR82 932 aa25.28■■□□□ 1.64
PDZRN3-202ENST00000308537 RIMBP2O15034 1052 aa25.27■■□□□ 1.64
PDZRN3-202ENST00000308537 MRPL50Q8N5N7 158 aaKnown RBP25.27■■□□□ 1.64
PDZRN3-202ENST00000308537 BSDC1Q9NW68 430 aaPredicted RBP25.27■■□□□ 1.64
PDZRN3-202ENST00000308537 A0A1B0GUL6 1792 aa25.26■■□□□ 1.63
PDZRN3-202ENST00000308537 SHTN1A0MZ66 631 aa25.26■■□□□ 1.63
PDZRN3-202ENST00000308537 FOXO4P98177 505 aa25.26■■□□□ 1.63
PDZRN3-202ENST00000308537 FAM161AQ3B820 660 aa25.26■■□□□ 1.63
PDZRN3-202ENST00000308537 MAP1SQ66K74 1059 aaPredicted RBP25.26■■□□□ 1.63
PDZRN3-202ENST00000308537 CDC5LQ99459 802 aaKnown RBP25.26■■□□□ 1.63
PDZRN3-202ENST00000308537 UFL1O94874 794 aa25.25■■□□□ 1.63
PDZRN3-202ENST00000308537 LMOD1P29536 600 aaPredicted RBP25.25■■□□□ 1.63
PDZRN3-202ENST00000308537 USP50Q70EL3 339 aaPredicted RBP25.25■■□□□ 1.63
PDZRN3-202ENST00000308537 MINPP1Q9UNW1 487 aa25.25■■□□□ 1.63
PDZRN3-202ENST00000308537 XDHP47989 1333 aa25.25■■□□□ 1.63
PDZRN3-202ENST00000308537 PSMD14O00487 310 aa25.24■■□□□ 1.63
PDZRN3-202ENST00000308537 ECE2O60344 883 aa25.24■■□□□ 1.63
PDZRN3-202ENST00000308537 DOK7Q18PE1 504 aa25.24■■□□□ 1.63
PDZRN3-202ENST00000308537 EPHA10Q5JZY3 1008 aa25.24■■□□□ 1.63
PDZRN3-202ENST00000308537 CNTROBQ8N137 903 aa25.24■■□□□ 1.63
PDZRN3-202ENST00000308537 EYA3Q99504 573 aa25.24■■□□□ 1.63
PDZRN3-202ENST00000308537 CREBZFQ9NS37 354 aa25.24■■□□□ 1.63
PDZRN3-202ENST00000308537 GGA1Q9UJY5 639 aa25.24■■□□□ 1.63
PDZRN3-202ENST00000308537 ITGA6P23229 1130 aa25.23■■□□□ 1.63
PDZRN3-202ENST00000308537 HIRAP54198 1017 aaPredicted RBP25.23■■□□□ 1.63
PDZRN3-202ENST00000308537 TNIP1Q15025 636 aa25.23■■□□□ 1.63
PDZRN3-202ENST00000308537 SSH1Q8WYL5 1049 aa25.23■■□□□ 1.63
PDZRN3-202ENST00000308537 ADARB2Q9NS39 739 aaKnown RBP25.23■■□□□ 1.63
PDZRN3-202ENST00000308537 ANKIB1Q9P2G1 1089 aa25.23■■□□□ 1.63
PDZRN3-202ENST00000308537 CLEC11AQ9Y240 323 aa25.22■■□□□ 1.63
PDZRN3-202ENST00000308537 ZBTB12Q9Y330 459 aaPredicted RBP25.22■■□□□ 1.63
PDZRN3-202ENST00000308537 ZNF609O15014 1411 aa25.21■■□□□ 1.63
PDZRN3-202ENST00000308537 FMR1Q06787 632 aaKnown RBP eCLIP25.21■■□□□ 1.63
PDZRN3-202ENST00000308537 TRPM4Q8TD43 1214 aa25.21■■□□□ 1.63
PDZRN3-202ENST00000308537 PGAP2Q9UHJ9 254 aa25.21■■□□□ 1.63
PDZRN3-202ENST00000308537 TRPM7Q96QT4 1865 aa25.2■■□□□ 1.62
PDZRN3-202ENST00000308537 GRM8O00222 908 aa25.2■■□□□ 1.62
PDZRN3-202ENST00000308537 ALDH1L1O75891 902 aa25.2■■□□□ 1.62
PDZRN3-202ENST00000308537 DPF2Q92785 391 aa25.2■■□□□ 1.62
PDZRN3-202ENST00000308537 KAZALD1Q96I82 304 aa25.2■■□□□ 1.62
PDZRN3-202ENST00000308537 ZC3H12CQ9C0D7 883 aaKnown RBP25.2■■□□□ 1.62
PDZRN3-202ENST00000308537 MED23Q9ULK4 1368 aa25.19■■□□□ 1.62
PDZRN3-202ENST00000308537 ATP2B4P23634 1241 aa25.19■■□□□ 1.62
PDZRN3-202ENST00000308537 CNOT7Q9UIV1 285 aaKnown RBP25.19■■□□□ 1.62
PDZRN3-202ENST00000308537 UTYO14607 1347 aa25.18■■□□□ 1.62
PDZRN3-202ENST00000308537 VIL1P09327 827 aaKnown RBP25.18■■□□□ 1.62
PDZRN3-202ENST00000308537 BCL2L13Q9BXK5 485 aa25.18■■□□□ 1.62
PDZRN3-202ENST00000308537 IRS2Q9Y4H2 1338 aa25.17■■□□□ 1.62
PDZRN3-202ENST00000308537 EGFRP00533 1210 aa25.17■■□□□ 1.62
PDZRN3-202ENST00000308537 CCT4P50991 539 aaKnown RBP25.17■■□□□ 1.62
PDZRN3-202ENST00000308537 TXNRD3Q86VQ6 643 aa25.17■■□□□ 1.62
PDZRN3-202ENST00000308537 MICALL2Q8IY33 904 aa25.17■■□□□ 1.62
PDZRN3-202ENST00000308537 SRCIN1Q9C0H9 1055 aa25.17■■□□□ 1.62
PDZRN3-202ENST00000308537 POLR2AP24928 1970 aaKnown RBP25.16■■□□□ 1.62
PDZRN3-202ENST00000308537 SLC4A10Q6U841 1118 aa25.16■■□□□ 1.62
PDZRN3-202ENST00000308537 CNTNAP1P78357 1384 aa25.16■■□□□ 1.62
PDZRN3-202ENST00000308537 PTPRCP08575 1304 aa25.15■■□□□ 1.62
PDZRN3-202ENST00000308537 TMEM88BA6NKF7 163 aa25.15■■□□□ 1.62
PDZRN3-202ENST00000308537 NBPF7P0C2Y1 421 aaPredicted RBP25.15■■□□□ 1.62
PDZRN3-202ENST00000308537 KLRK1P26718 216 aa25.15■■□□□ 1.62
PDZRN3-202ENST00000308537 IGHMBP2P38935 993 aaKnown RBP25.15■■□□□ 1.62
PDZRN3-202ENST00000308537 TRAF5O00463 557 aa25.14■■□□□ 1.62
PDZRN3-202ENST00000308537 RPS12P25398 132 aaKnown RBP25.14■■□□□ 1.62
PDZRN3-202ENST00000308537 ALDH1L2Q3SY69 923 aa25.14■■□□□ 1.62
PDZRN3-202ENST00000308537 LMBR1LQ6UX01 489 aa25.14■■□□□ 1.62
PDZRN3-202ENST00000308537 SUCLG2Q96I99 432 aa25.14■■□□□ 1.62
PDZRN3-202ENST00000308537 GMLQ99445 158 aa25.14■■□□□ 1.62
PDZRN3-202ENST00000308537 SAMD7Q7Z3H4 446 aa25.13■■□□□ 1.61
PDZRN3-202ENST00000308537 MIER1Q8N108 512 aa25.13■■□□□ 1.61
PDZRN3-202ENST00000308537 ZC3H15Q8WU90 426 aaKnown RBP25.13■■□□□ 1.61
PDZRN3-202ENST00000308537 MKRN1Q9UHC7 482 aaKnown RBP25.13■■□□□ 1.61
PDZRN3-202ENST00000308537 LEMD3Q9Y2U8 911 aa25.13■■□□□ 1.61
PDZRN3-202ENST00000308537 ANKRD18BA2A2Z9 1011 aa25.12■■□□□ 1.61
PDZRN3-202ENST00000308537 CHRNDQ07001 517 aa25.12■■□□□ 1.61
PDZRN3-202ENST00000308537 CST9Q5W186 159 aa25.12■■□□□ 1.61
PDZRN3-202ENST00000308537 PODNQ7Z5L7 613 aa25.12■■□□□ 1.61
PDZRN3-202ENST00000308537 SNAP23O00161 211 aa25.11■■□□□ 1.61
PDZRN3-202ENST00000308537 MPHOSPH8Q99549 860 aa25.11■■□□□ 1.61
PDZRN3-202ENST00000308537 C9orf78Q9NZ63 289 aaPredicted RBP25.11■■□□□ 1.61
PDZRN3-202ENST00000308537 ZNF804BA4D1E1 1349 aa25.11■■□□□ 1.61
PDZRN3-202ENST00000308537 RASSF10A6NK89 507 aa25.1■■□□□ 1.61
PDZRN3-202ENST00000308537 H7C1D1 291 aa25.1■■□□□ 1.61
PDZRN3-202ENST00000308537 IFIT5Q13325 482 aaKnown RBP25.1■■□□□ 1.61
PDZRN3-202ENST00000308537 RABL6Q3YEC7 729 aaPredicted RBP25.1■■□□□ 1.61
PDZRN3-202ENST00000308537 RSBN1LQ6PCB5 846 aaPredicted RBP25.1■■□□□ 1.61
PDZRN3-202ENST00000308537 ZNF594Q96JF6 807 aaPredicted RBP25.1■■□□□ 1.61
PDZRN3-202ENST00000308537 GLIS2Q9BZE0 524 aaPredicted RBP25.1■■□□□ 1.61
PDZRN3-202ENST00000308537 ANKRD2Q9GZV1 360 aa25.1■■□□□ 1.61
PDZRN3-202ENST00000308537 CT47B1P0C2W7 299 aaPredicted RBP25.09■■□□□ 1.61
PDZRN3-202ENST00000308537 BRPF1P55201 1214 aaPredicted RBP25.09■■□□□ 1.61
PDZRN3-202ENST00000308537 ZNF280AP59817 542 aaPredicted RBP25.09■■□□□ 1.61
PDZRN3-202ENST00000308537 TBC1D10BQ4KMP7 808 aaPredicted RBP25.09■■□□□ 1.61
PDZRN3-202ENST00000308537 DIEXFQ68CQ4 756 aaKnown RBP25.08■■□□□ 1.61
PDZRN3-202ENST00000308537 ANKRD44Q8N8A2 993 aa25.08■■□□□ 1.61
PDZRN3-202ENST00000308537 AGBL3Q8NEM8 1001 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms