RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 NOP58Q9Y2X3 529 aaKnown RBP24.94■■□□□ 1.58
SCAMP3-201ENST00000302631 EYA2O00167 538 aa24.93■■□□□ 1.58
SCAMP3-201ENST00000302631 CIAO1O76071 339 aa24.93■■□□□ 1.58
SCAMP3-201ENST00000302631 OLFM4Q6UX06 510 aa24.93■■□□□ 1.58
SCAMP3-201ENST00000302631 PODXL2Q9NZ53 605 aa24.93■■□□□ 1.58
SCAMP3-201ENST00000302631 PA2G4Q9UQ80 394 aaKnown RBP24.93■■□□□ 1.58
SCAMP3-201ENST00000302631 LRRC24Q50LG9 513 aa24.92■■□□□ 1.58
SCAMP3-201ENST00000302631 CCDC93Q567U6 631 aa24.92■■□□□ 1.58
SCAMP3-201ENST00000302631 ATG9AQ7Z3C6 839 aa24.92■■□□□ 1.58
SCAMP3-201ENST00000302631 HMMRO75330 724 aa24.91■■□□□ 1.58
SCAMP3-201ENST00000302631 RTKN2Q8IZC4 609 aa24.9■■□□□ 1.58
SCAMP3-201ENST00000302631 RTFDC1Q9BY42 306 aaPredicted RBP24.9■■□□□ 1.58
SCAMP3-201ENST00000302631 DUOX1Q9NRD9 1551 aa24.89■■□□□ 1.58
SCAMP3-201ENST00000302631 CHRNDQ07001 517 aa24.89■■□□□ 1.58
SCAMP3-201ENST00000302631 CNNM1Q9NRU3 951 aa24.89■■□□□ 1.58
SCAMP3-201ENST00000302631 ZNF219Q9P2Y4 722 aaPredicted RBP24.89■■□□□ 1.58
SCAMP3-201ENST00000302631 IL15P40933 162 aaPredicted RBP24.88■■□□□ 1.57
SCAMP3-201ENST00000302631 GPSM2P81274 684 aa24.88■■□□□ 1.57
SCAMP3-201ENST00000302631 PSMD1Q99460 953 aa24.88■■□□□ 1.57
SCAMP3-201ENST00000302631 ANKRD2Q9GZV1 360 aa24.88■■□□□ 1.57
SCAMP3-201ENST00000302631 TMX4Q9H1E5 349 aaPredicted RBP24.88■■□□□ 1.57
SCAMP3-201ENST00000302631 MROH5Q6ZUA9 1318 aa24.88■■□□□ 1.57
SCAMP3-201ENST00000302631 LTBP3Q9NS15 1303 aa24.88■■□□□ 1.57
SCAMP3-201ENST00000302631 GOLGB1Q14789 3259 aaKnown RBP24.88■■□□□ 1.57
SCAMP3-201ENST00000302631 GPR162Q16538 588 aa24.87■■□□□ 1.57
SCAMP3-201ENST00000302631 MPNDQ8N594 471 aa24.87■■□□□ 1.57
SCAMP3-201ENST00000302631 VGLL2Q8N8G2 317 aa24.87■■□□□ 1.57
SCAMP3-201ENST00000302631 XDHP47989 1333 aa24.87■■□□□ 1.57
SCAMP3-201ENST00000302631 SBF1O95248 1867 aa24.87■■□□□ 1.57
SCAMP3-201ENST00000302631 NFKBIEO00221 500 aa24.86■■□□□ 1.57
SCAMP3-201ENST00000302631 GRIN3BO60391 1043 aa24.86■■□□□ 1.57
SCAMP3-201ENST00000302631 HDAC1Q13547 482 aaPredicted RBP24.86■■□□□ 1.57
SCAMP3-201ENST00000302631 SIL1Q9H173 461 aa24.86■■□□□ 1.57
SCAMP3-201ENST00000302631 SURF6O75683 361 aaKnown RBP24.86■■□□□ 1.57
SCAMP3-201ENST00000302631 NSFL1CQ9UNZ2 370 aaKnown RBP24.86■■□□□ 1.57
SCAMP3-201ENST00000302631 FKBP4Q02790 459 aaKnown RBP eCLIP24.85■■□□□ 1.57
SCAMP3-201ENST00000302631 G3BP1Q13283 466 aaKnown RBP eCLIP24.85■■□□□ 1.57
SCAMP3-201ENST00000302631 PELP1Q8IZL8 1130 aaKnown RBP24.85■■□□□ 1.57
SCAMP3-201ENST00000302631 DCTPP1Q9H773 170 aa24.85■■□□□ 1.57
SCAMP3-201ENST00000302631 LEMD3Q9Y2U8 911 aa24.85■■□□□ 1.57
SCAMP3-201ENST00000302631 CCDC88AQ3V6T2 1871 aa24.84■■□□□ 1.57
SCAMP3-201ENST00000302631 SASH1O94885 1247 aa24.84■■□□□ 1.57
SCAMP3-201ENST00000302631 PDE8BO95263 885 aa24.84■■□□□ 1.57
SCAMP3-201ENST00000302631 NEFLP07196 543 aa24.84■■□□□ 1.57
SCAMP3-201ENST00000302631 ATP2B4P23634 1241 aa24.84■■□□□ 1.57
SCAMP3-201ENST00000302631 DPP8Q6V1X1 898 aaPredicted RBP24.84■■□□□ 1.57
SCAMP3-201ENST00000302631 TBC1D16Q8TBP0 767 aa24.84■■□□□ 1.57
SCAMP3-201ENST00000302631 POLLQ9UGP5 575 aa24.84■■□□□ 1.57
SCAMP3-201ENST00000302631 VPS33BQ9H267 617 aa24.83■■□□□ 1.57
SCAMP3-201ENST00000302631 ANKIB1Q9P2G1 1089 aa24.83■■□□□ 1.57
SCAMP3-201ENST00000302631 TAF5LO75529 589 aa24.82■■□□□ 1.56
SCAMP3-201ENST00000302631 HSP90AB4PQ58FF6 505 aa24.82■■□□□ 1.56
SCAMP3-201ENST00000302631 METTL24Q5JXM2 366 aa24.82■■□□□ 1.56
SCAMP3-201ENST00000302631 ERICH6BQ5W0A0 696 aa24.82■■□□□ 1.56
SCAMP3-201ENST00000302631 ARHGAP27Q6ZUM4 889 aa24.82■■□□□ 1.56
SCAMP3-201ENST00000302631 HELBQ8NG08 1087 aaPredicted RBP24.82■■□□□ 1.56
SCAMP3-201ENST00000302631 GGA1Q9UJY5 639 aa24.82■■□□□ 1.56
SCAMP3-201ENST00000302631 DICER1Q9UPY3 1922 aaKnown RBP24.82■■□□□ 1.56
SCAMP3-201ENST00000302631 IRS2Q9Y4H2 1338 aa24.81■■□□□ 1.56
SCAMP3-201ENST00000302631 FGFR2P21802 821 aa24.81■■□□□ 1.56
SCAMP3-201ENST00000302631 UBE4AQ14139 1066 aa24.81■■□□□ 1.56
SCAMP3-201ENST00000302631 SUPT20HQ8NEM7 779 aa24.81■■□□□ 1.56
SCAMP3-201ENST00000302631 TAOK3Q9H2K8 898 aa24.81■■□□□ 1.56
SCAMP3-201ENST00000302631 CEP126Q9P2H0 1117 aa24.81■■□□□ 1.56
SCAMP3-201ENST00000302631 EXOC6BQ9Y2D4 811 aa24.81■■□□□ 1.56
SCAMP3-201ENST00000302631 WTIPA6NIX2 430 aaPredicted RBP24.8■■□□□ 1.56
SCAMP3-201ENST00000302631 C15orf52Q6ZUT6 534 aaKnown RBP24.8■■□□□ 1.56
SCAMP3-201ENST00000302631 ZNF804BA4D1E1 1349 aa24.8■■□□□ 1.56
SCAMP3-201ENST00000302631 RAB11FIP3O75154 756 aa24.79■■□□□ 1.56
SCAMP3-201ENST00000302631 PRELPP51888 382 aa24.79■■□□□ 1.56
SCAMP3-201ENST00000302631 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.79■■□□□ 1.56
SCAMP3-201ENST00000302631 UFL1O94874 794 aa24.78■■□□□ 1.56
SCAMP3-201ENST00000302631 TFCP2Q12800 502 aa24.78■■□□□ 1.56
SCAMP3-201ENST00000302631 ERC1Q8IUD2 1116 aa24.78■■□□□ 1.56
SCAMP3-201ENST00000302631 RWDD1Q9H446 243 aaPredicted RBP24.78■■□□□ 1.56
SCAMP3-201ENST00000302631 GPR108Q9NPR9 543 aa24.78■■□□□ 1.56
SCAMP3-201ENST00000302631 SNAP23O00161 211 aa24.78■■□□□ 1.56
SCAMP3-201ENST00000302631 IGHDP01880 384 aa24.78■■□□□ 1.56
SCAMP3-201ENST00000302631 RASSF7Q02833 373 aa24.78■■□□□ 1.56
SCAMP3-201ENST00000302631 MED23Q9ULK4 1368 aa24.77■■□□□ 1.56
SCAMP3-201ENST00000302631 ARAP2Q8WZ64 1704 aa24.77■■□□□ 1.56
SCAMP3-201ENST00000302631 DCAF8L1A6NGE4 600 aa24.77■■□□□ 1.56
SCAMP3-201ENST00000302631 KIAA2012Q0VF49 1180 aa24.77■■□□□ 1.56
SCAMP3-201ENST00000302631 PUM3Q15397 648 aaKnown RBP24.77■■□□□ 1.56
SCAMP3-201ENST00000302631 EYA3Q99504 573 aa24.77■■□□□ 1.56
SCAMP3-201ENST00000302631 C6orf229H3BNL8 230 aa24.76■■□□□ 1.55
SCAMP3-201ENST00000302631 RHPN1Q8TCX5 695 aa24.76■■□□□ 1.55
SCAMP3-201ENST00000302631 KIF1BPQ96EK5 621 aa24.76■■□□□ 1.55
SCAMP3-201ENST00000302631 LMNB1P20700 586 aa24.75■■□□□ 1.55
SCAMP3-201ENST00000302631 IARSP41252 1262 aaKnown RBP24.75■■□□□ 1.55
SCAMP3-201ENST00000302631 OS9Q13438 667 aaPredicted RBP24.75■■□□□ 1.55
SCAMP3-201ENST00000302631 WASHC4Q2M389 1173 aa24.75■■□□□ 1.55
SCAMP3-201ENST00000302631 SMC5Q8IY18 1101 aa24.75■■□□□ 1.55
SCAMP3-201ENST00000302631 LPIN2Q92539 896 aa24.75■■□□□ 1.55
SCAMP3-201ENST00000302631 GCC1Q96CN9 775 aa24.75■■□□□ 1.55
SCAMP3-201ENST00000302631 ZNF277Q9NRM2 450 aaPredicted RBP24.75■■□□□ 1.55
SCAMP3-201ENST00000302631 AKAP2Q9Y2D5 859 aa24.75■■□□□ 1.55
SCAMP3-201ENST00000302631 TXNRD3Q86VQ6 643 aa24.74■■□□□ 1.55
SCAMP3-201ENST00000302631 UTRNP46939 3433 aa24.74■■□□□ 1.55
SCAMP3-201ENST00000302631 COL4A5P29400 1685 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms