RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 BICDL1Q6ZP65 573 aa17.42■□□□□ 0.38
SMG8-201ENST00000300917 GPT2Q8TD30 523 aa17.42■□□□□ 0.38
SMG8-201ENST00000300917 INTS4Q96HW7 963 aaKnown RBP17.42■□□□□ 0.38
SMG8-201ENST00000300917 LAMB4A4D0S4 1761 aa17.42■□□□□ 0.38
SMG8-201ENST00000300917 FOSBP53539 338 aa17.42■□□□□ 0.38
SMG8-201ENST00000300917 TAOK2Q9UL54 1235 aa17.42■□□□□ 0.38
SMG8-201ENST00000300917 MED23Q9ULK4 1368 aa17.41■□□□□ 0.38
SMG8-201ENST00000300917 SYT1P21579 422 aa17.41■□□□□ 0.38
SMG8-201ENST00000300917 CCDC158Q5M9N0 1113 aa17.41■□□□□ 0.38
SMG8-201ENST00000300917 TTLL5Q6EMB2 1281 aa17.41■□□□□ 0.38
SMG8-201ENST00000300917 FERMT3Q86UX7 667 aa17.41■□□□□ 0.38
SMG8-201ENST00000300917 ZAP70P43403 619 aa17.41■□□□□ 0.38
SMG8-201ENST00000300917 GRPEL1Q9HAV7 217 aa17.41■□□□□ 0.38
SMG8-201ENST00000300917 CYP21A2P08686 494 aa17.41■□□□□ 0.38
SMG8-201ENST00000300917 HSP90B1P14625 803 aaKnown RBP17.41■□□□□ 0.38
SMG8-201ENST00000300917 CTSWP56202 376 aa17.41■□□□□ 0.38
SMG8-201ENST00000300917 HAND2P61296 217 aa17.41■□□□□ 0.38
SMG8-201ENST00000300917 EPB41L2O43491 1005 aaKnown RBP17.4■□□□□ 0.38
SMG8-201ENST00000300917 ST3GAL1Q11201 340 aa17.4■□□□□ 0.38
SMG8-201ENST00000300917 KLHL40Q2TBA0 621 aa17.4■□□□□ 0.38
SMG8-201ENST00000300917 SEC31BQ9NQW1 1179 aa17.4■□□□□ 0.38
SMG8-201ENST00000300917 FSD2A1L4K1 749 aa17.4■□□□□ 0.38
SMG8-201ENST00000300917 ANKRD18BA2A2Z9 1011 aa17.4■□□□□ 0.38
SMG8-201ENST00000300917 ATP2B3Q16720 1220 aa17.4■□□□□ 0.38
SMG8-201ENST00000300917 SUSD4Q5VX71 490 aa17.4■□□□□ 0.38
SMG8-201ENST00000300917 UBR2Q8IWV8 1755 aa17.4■□□□□ 0.38
SMG8-201ENST00000300917 GADD45BO75293 160 aaPredicted RBP17.39■□□□□ 0.38
SMG8-201ENST00000300917 CCDC87Q9NVE4 849 aa17.39■□□□□ 0.38
SMG8-201ENST00000300917 PSMA5P28066 241 aa17.39■□□□□ 0.37
SMG8-201ENST00000300917 TRIM28Q13263 835 aaKnown RBP17.39■□□□□ 0.37
SMG8-201ENST00000300917 FAM173BQ6P4H8 233 aa17.39■□□□□ 0.37
SMG8-201ENST00000300917 INTS5Q6P9B9 1019 aaKnown RBP17.39■□□□□ 0.37
SMG8-201ENST00000300917 CNPY2Q9Y2B0 182 aa17.39■□□□□ 0.37
SMG8-201ENST00000300917 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.39■□□□□ 0.37
SMG8-201ENST00000300917 FIBPO43427 364 aa17.39■□□□□ 0.37
SMG8-201ENST00000300917 CCDC24Q8N4L8 307 aa17.39■□□□□ 0.37
SMG8-201ENST00000300917 M0R2C6 588 aa17.38■□□□□ 0.37
SMG8-201ENST00000300917 STX6O43752 255 aa17.38■□□□□ 0.37
SMG8-201ENST00000300917 TOM1O60784 492 aa17.38■□□□□ 0.37
SMG8-201ENST00000300917 CLEC17AQ6ZS10 378 aa17.38■□□□□ 0.37
SMG8-201ENST00000300917 RPS6KB1P23443 525 aa17.38■□□□□ 0.37
SMG8-201ENST00000300917 IL6STP40189 918 aaPredicted RBP17.38■□□□□ 0.37
SMG8-201ENST00000300917 OSBP2Q969R2 916 aa17.38■□□□□ 0.37
SMG8-201ENST00000300917 NIP7Q9Y221 180 aaKnown RBP eCLIP17.38■□□□□ 0.37
SMG8-201ENST00000300917 RPAP1Q9BWH6 1393 aaPredicted RBP17.38■□□□□ 0.37
SMG8-201ENST00000300917 CSF1RP07333 972 aa17.38■□□□□ 0.37
SMG8-201ENST00000300917 IL17RAQ96F46 866 aa17.38■□□□□ 0.37
SMG8-201ENST00000300917 NEK1Q96PY6 1258 aa17.38■□□□□ 0.37
SMG8-201ENST00000300917 WDR33Q9C0J8 1336 aaKnown RBP17.38■□□□□ 0.37
SMG8-201ENST00000300917 CIAO1O76071 339 aa17.37■□□□□ 0.37
SMG8-201ENST00000300917 STOX1Q6ZVD7 989 aa17.37■□□□□ 0.37
SMG8-201ENST00000300917 DDX11Q96FC9 970 aa17.37■□□□□ 0.37
SMG8-201ENST00000300917 MAST3O60307 1309 aa17.37■□□□□ 0.37
SMG8-201ENST00000300917 TOB2Q14106 344 aaPredicted RBP17.37■□□□□ 0.37
SMG8-201ENST00000300917 ZSCAN23Q3MJ62 389 aa17.37■□□□□ 0.37
SMG8-201ENST00000300917 Q6ZUG5 572 aa17.37■□□□□ 0.37
SMG8-201ENST00000300917 TM6SF1Q9BZW5 370 aa17.37■□□□□ 0.37
SMG8-201ENST00000300917 COL16A1Q07092 1604 aaPredicted RBP17.37■□□□□ 0.37
SMG8-201ENST00000300917 SPATA31A5Q5VU36 1347 aa17.36■□□□□ 0.37
SMG8-201ENST00000300917 SPATA31A7Q8IWB4 1347 aa17.36■□□□□ 0.37
SMG8-201ENST00000300917 IDH1O75874 414 aaKnown RBP17.36■□□□□ 0.37
SMG8-201ENST00000300917 BRF1Q92994 677 aa17.36■□□□□ 0.37
SMG8-201ENST00000300917 IQSEC3Q9UPP2 1182 aaPredicted RBP17.36■□□□□ 0.37
SMG8-201ENST00000300917 AKAP2Q9Y2D5 859 aa17.36■□□□□ 0.37
SMG8-201ENST00000300917 SYCE3A1L190 88 aa17.36■□□□□ 0.37
SMG8-201ENST00000300917 RNF113AO15541 343 aaKnown RBP17.36■□□□□ 0.37
SMG8-201ENST00000300917 EIF5P55010 431 aaKnown RBP17.36■□□□□ 0.37
SMG8-201ENST00000300917 USP48Q86UV5 1035 aa17.36■□□□□ 0.37
SMG8-201ENST00000300917 TMEM63CQ9P1W3 806 aa17.36■□□□□ 0.37
SMG8-201ENST00000300917 RIPOR2Q9Y4F9 1068 aa17.36■□□□□ 0.37
SMG8-201ENST00000300917 ITGB4P16144 1822 aa17.36■□□□□ 0.37
SMG8-201ENST00000300917 RAB11FIP4Q86YS3 637 aa17.36■□□□□ 0.37
SMG8-201ENST00000300917 TJP1Q07157 1748 aa17.35■□□□□ 0.37
SMG8-201ENST00000300917 COL14A1Q05707 1796 aaKnown RBP17.35■□□□□ 0.37
SMG8-201ENST00000300917 PDE8AO60658 829 aa17.35■□□□□ 0.37
SMG8-201ENST00000300917 ZSCAN22P10073 491 aaPredicted RBP17.35■□□□□ 0.37
SMG8-201ENST00000300917 HSPD1P10809 573 aaKnown RBP17.35■□□□□ 0.37
SMG8-201ENST00000300917 PTMSP20962 102 aa17.35■□□□□ 0.37
SMG8-201ENST00000300917 PHKA1P46020 1223 aa17.35■□□□□ 0.37
SMG8-201ENST00000300917 MRE11P49959 708 aa17.35■□□□□ 0.37
SMG8-201ENST00000300917 KCNB2Q92953 911 aa17.35■□□□□ 0.37
SMG8-201ENST00000300917 GPR108Q9NPR9 543 aa17.35■□□□□ 0.37
SMG8-201ENST00000300917 PALLDQ8WX93 1383 aa17.35■□□□□ 0.37
SMG8-201ENST00000300917 NUP188Q5SRE5 1749 aa17.35■□□□□ 0.37
SMG8-201ENST00000300917 JAK2O60674 1132 aa17.35■□□□□ 0.37
SMG8-201ENST00000300917 MCAMP43121 646 aa17.35■□□□□ 0.37
SMG8-201ENST00000300917 U3KPZ7 1027 aaPredicted RBP17.35■□□□□ 0.37
SMG8-201ENST00000300917 PAPPAQ13219 1627 aa17.34■□□□□ 0.37
SMG8-201ENST00000300917 LARP1BQ659C4 914 aaKnown RBP17.34■□□□□ 0.37
SMG8-201ENST00000300917 PUS7LQ9H0K6 701 aaKnown RBP17.34■□□□□ 0.37
SMG8-201ENST00000300917 ZMYM1Q5SVZ6 1142 aa17.34■□□□□ 0.37
SMG8-201ENST00000300917 AEBP2Q6ZN18 517 aaPredicted RBP17.34■□□□□ 0.37
SMG8-201ENST00000300917 CCT2P78371 535 aaKnown RBP17.34■□□□□ 0.37
SMG8-201ENST00000300917 DNM1Q05193 864 aaKnown RBP17.34■□□□□ 0.37
SMG8-201ENST00000300917 MPHOSPH8Q99549 860 aa17.34■□□□□ 0.37
SMG8-201ENST00000300917 GPHNQ9NQX3 736 aaPredicted RBP17.34■□□□□ 0.37
SMG8-201ENST00000300917 ZNF34Q8IZ26 560 aa17.33■□□□□ 0.37
SMG8-201ENST00000300917 RNF214Q8ND24 703 aa17.33■□□□□ 0.37
SMG8-201ENST00000300917 ZSCAN31Q96LW9 406 aaPredicted RBP17.33■□□□□ 0.37
SMG8-201ENST00000300917 WTIPA6NIX2 430 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms