RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 FAM13BQ9NYF5 915 aa8.05□□□□□ -1.12
TMC1-201ENST00000297784 R3HCC1Q9Y3T6 440 aaKnown RBP8.05□□□□□ -1.12
TMC1-201ENST00000297784 HCLS1P14317 486 aaPredicted RBP8.04□□□□□ -1.12
TMC1-201ENST00000297784 LRRC24Q50LG9 513 aa8.04□□□□□ -1.12
TMC1-201ENST00000297784 EAF2Q96CJ1 260 aaPredicted RBP8.04□□□□□ -1.12
TMC1-201ENST00000297784 KIF1BPQ96EK5 621 aa8.04□□□□□ -1.12
TMC1-201ENST00000297784 AK7Q96M32 723 aa8.04□□□□□ -1.12
TMC1-201ENST00000297784 CAMKK2Q96RR4 588 aa8.04□□□□□ -1.12
TMC1-201ENST00000297784 UTP14AQ9BVJ6 771 aaKnown RBP8.04□□□□□ -1.12
TMC1-201ENST00000297784 PUS3Q9BZE2 481 aaKnown RBP8.04□□□□□ -1.12
TMC1-201ENST00000297784 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.04□□□□□ -1.12
TMC1-201ENST00000297784 TNRC6CQ9HCJ0 1690 aaKnown RBP8.04□□□□□ -1.12
TMC1-201ENST00000297784 GOLGA6L22H0YM25 854 aa8.04□□□□□ -1.12
TMC1-201ENST00000297784 NCLP19338 710 aaKnown RBP8.04□□□□□ -1.12
TMC1-201ENST00000297784 CTSWP56202 376 aa8.04□□□□□ -1.12
TMC1-201ENST00000297784 ERFEQ4G0M1 354 aa8.04□□□□□ -1.12
TMC1-201ENST00000297784 BMP2KLQ5H9B9 411 aa8.04□□□□□ -1.12
TMC1-201ENST00000297784 GYS1P13807 737 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 PARP10Q53GL7 1025 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 SASS6Q6UVJ0 657 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 BICDL1Q6ZP65 573 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 CCDC94Q9BW85 323 aaPredicted RBP8.03□□□□□ -1.12
TMC1-201ENST00000297784 STAP2Q9UGK3 403 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 SH3TC1Q8TE82 1336 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 PDE8AO60658 829 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 ZPR1O75312 459 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 SSFA2P28290 1259 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 RFC4P35249 363 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 EZH2Q15910 746 aaKnown RBP8.03□□□□□ -1.12
TMC1-201ENST00000297784 TTC22Q5TAA0 569 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 PI4K2BQ8TCG2 481 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 TLR7Q9NYK1 1049 aaKnown RBP8.03□□□□□ -1.12
TMC1-201ENST00000297784 ZNF652Q9Y2D9 606 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 ZKSCAN5Q9Y2L8 839 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 A0A1B0GUL6 1792 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 LRP5O75197 1615 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 MX1P20591 662 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 ITGA6P23229 1130 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 EN1Q05925 392 aaPredicted RBP8.03□□□□□ -1.12
TMC1-201ENST00000297784 TFCP2Q12800 502 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 CHMP3Q9Y3E7 222 aa8.03□□□□□ -1.12
TMC1-201ENST00000297784 ABCC12Q96J65 1359 aa8.02□□□□□ -1.12
TMC1-201ENST00000297784 TM4SF1P30408 202 aa8.02□□□□□ -1.13
TMC1-201ENST00000297784 NFIXQ14938 502 aa8.02□□□□□ -1.13
TMC1-201ENST00000297784 HSP90AB4PQ58FF6 505 aa8.02□□□□□ -1.13
TMC1-201ENST00000297784 COL23A1Q86Y22 540 aaPredicted RBP8.02□□□□□ -1.13
TMC1-201ENST00000297784 AK9Q5TCS8 1911 aa8.02□□□□□ -1.13
TMC1-201ENST00000297784 G3BP1Q13283 466 aaKnown RBP eCLIP8.02□□□□□ -1.13
TMC1-201ENST00000297784 SLC10A5Q5PT55 438 aa8.02□□□□□ -1.13
TMC1-201ENST00000297784 PPP4R3CPQ6ZMV5 832 aa8.02□□□□□ -1.13
TMC1-201ENST00000297784 GTPBP4Q9BZE4 634 aaKnown RBP8.02□□□□□ -1.13
TMC1-201ENST00000297784 SEC31BQ9NQW1 1179 aa8.02□□□□□ -1.13
TMC1-201ENST00000297784 RIPOR2Q9Y4F9 1068 aa8.02□□□□□ -1.13
TMC1-201ENST00000297784 SDSP20132 328 aa8.01□□□□□ -1.13
TMC1-201ENST00000297784 CCDC24Q8N4L8 307 aa8.01□□□□□ -1.13
TMC1-201ENST00000297784 SETDB2Q96T68 719 aa8.01□□□□□ -1.13
TMC1-201ENST00000297784 QSER1Q2KHR3 1735 aa8.01□□□□□ -1.13
TMC1-201ENST00000297784 NRXN2Q9P2S2 1712 aa8.01□□□□□ -1.13
TMC1-201ENST00000297784 EYA2O00167 538 aa8.01□□□□□ -1.13
TMC1-201ENST00000297784 ZSCAN20P17040 1043 aaPredicted RBP8.01□□□□□ -1.13
TMC1-201ENST00000297784 CCDC57Q2TAC2 916 aa8.01□□□□□ -1.13
TMC1-201ENST00000297784 TPRNQ4KMQ1 711 aa8.01□□□□□ -1.13
TMC1-201ENST00000297784 PNPLA7Q6ZV29 1317 aa8.01□□□□□ -1.13
TMC1-201ENST00000297784 A0A0U1RQG5 324 aaPredicted RBP8.01□□□□□ -1.13
TMC1-201ENST00000297784 CIAO1O76071 339 aa8.01□□□□□ -1.13
TMC1-201ENST00000297784 BAG4O95429 457 aaKnown RBP8.01□□□□□ -1.13
TMC1-201ENST00000297784 IFIT5Q13325 482 aaKnown RBP8.01□□□□□ -1.13
TMC1-201ENST00000297784 OS9Q13438 667 aaPredicted RBP8.01□□□□□ -1.13
TMC1-201ENST00000297784 ERC1Q8IUD2 1116 aa8.01□□□□□ -1.13
TMC1-201ENST00000297784 VGLL2Q8N8G2 317 aa8.01□□□□□ -1.13
TMC1-201ENST00000297784 KIF2CQ99661 725 aa8.01□□□□□ -1.13
TMC1-201ENST00000297784 CCDC8Q9H0W5 538 aaPredicted RBP8.01□□□□□ -1.13
TMC1-201ENST00000297784 DBNLQ9UJU6 430 aaKnown RBP8.01□□□□□ -1.13
TMC1-201ENST00000297784 RIC1Q4ADV7 1423 aa8□□□□□ -1.13
TMC1-201ENST00000297784 K7ELQ4 463 aaPredicted RBP8□□□□□ -1.13
TMC1-201ENST00000297784 KIF20AO95235 890 aa8□□□□□ -1.13
TMC1-201ENST00000297784 PLCB2Q00722 1185 aa8□□□□□ -1.13
TMC1-201ENST00000297784 TNNI3KQ59H18 835 aa8□□□□□ -1.13
TMC1-201ENST00000297784 DEFB132Q7Z7B7 95 aa8□□□□□ -1.13
TMC1-201ENST00000297784 TFCP2L1Q9NZI6 479 aa8□□□□□ -1.13
TMC1-201ENST00000297784 FPGT-TNNI3KV9GXZ4 949 aa8□□□□□ -1.13
TMC1-201ENST00000297784 ANKRD31Q8N7Z5 1873 aa8□□□□□ -1.13
TMC1-201ENST00000297784 TIMM10P62072 90 aa8□□□□□ -1.13
TMC1-201ENST00000297784 DDR1Q08345 913 aa8□□□□□ -1.13
TMC1-201ENST00000297784 AACSQ86V21 672 aa8□□□□□ -1.13
TMC1-201ENST00000297784 CLASRPQ8N2M8 674 aaKnown RBP8□□□□□ -1.13
TMC1-201ENST00000297784 DDX49Q9Y6V7 483 aaKnown RBP8□□□□□ -1.13
TMC1-201ENST00000297784 RTL9Q8NET4 1388 aa8□□□□□ -1.13
TMC1-201ENST00000297784 TULP1O00294 542 aaPredicted RBP7.99□□□□□ -1.13
TMC1-201ENST00000297784 IL15P40933 162 aaPredicted RBP7.99□□□□□ -1.13
TMC1-201ENST00000297784 SF3B3Q15393 1217 aaKnown RBP7.99□□□□□ -1.13
TMC1-201ENST00000297784 TBC1D9Q6ZT07 1266 aa7.99□□□□□ -1.13
TMC1-201ENST00000297784 PDGFDQ9GZP0 370 aaPredicted RBP7.99□□□□□ -1.13
TMC1-201ENST00000297784 CCDC39Q9UFE4 941 aa7.99□□□□□ -1.13
TMC1-201ENST00000297784 CARMIL3Q8ND23 1372 aa7.99□□□□□ -1.13
TMC1-201ENST00000297784 POLRMTO00411 1230 aaKnown RBP7.99□□□□□ -1.13
TMC1-201ENST00000297784 SLC51AQ86UW1 340 aa7.99□□□□□ -1.13
TMC1-201ENST00000297784 NBPF5PQ86XG9 351 aaPredicted RBP7.99□□□□□ -1.13
TMC1-201ENST00000297784 AKAP11Q9UKA4 1901 aa7.99□□□□□ -1.13
TMC1-201ENST00000297784 AOX1Q06278 1338 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms