RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 ZSCAN22P10073 491 aaPredicted RBP12.45□□□□□ -0.42
ERCC3-201ENST00000285398 CCT4P50991 539 aaKnown RBP12.45□□□□□ -0.42
ERCC3-201ENST00000285398 PAPPAQ13219 1627 aa12.44□□□□□ -0.42
ERCC3-201ENST00000285398 IGKV5-2P06315 115 aa12.44□□□□□ -0.42
ERCC3-201ENST00000285398 RXRBP28702 533 aa12.44□□□□□ -0.42
ERCC3-201ENST00000285398 TERF2Q15554 542 aa12.44□□□□□ -0.42
ERCC3-201ENST00000285398 GIMAP6Q6P9H5 292 aa12.44□□□□□ -0.42
ERCC3-201ENST00000285398 CCDC112Q8NEF3 446 aa12.44□□□□□ -0.42
ERCC3-201ENST00000285398 ANO2Q9NQ90 1003 aa12.44□□□□□ -0.42
ERCC3-201ENST00000285398 UBR2Q8IWV8 1755 aa12.44□□□□□ -0.42
ERCC3-201ENST00000285398 AP5Z1O43299 807 aa12.44□□□□□ -0.42
ERCC3-201ENST00000285398 CHMLP26374 656 aa12.44□□□□□ -0.42
ERCC3-201ENST00000285398 FAM193AP78312 1265 aa12.44□□□□□ -0.42
ERCC3-201ENST00000285398 KRT222Q8N1A0 295 aa12.44□□□□□ -0.42
ERCC3-201ENST00000285398 EPB41L2O43491 1005 aaKnown RBP12.43□□□□□ -0.42
ERCC3-201ENST00000285398 CRKLP46109 303 aaKnown RBP12.43□□□□□ -0.42
ERCC3-201ENST00000285398 KIF18AQ8NI77 898 aa12.43□□□□□ -0.42
ERCC3-201ENST00000285398 TIGD1Q96MW7 591 aa12.43□□□□□ -0.42
ERCC3-201ENST00000285398 LRRFIP2Q9Y608 721 aaKnown RBP12.43□□□□□ -0.42
ERCC3-201ENST00000285398 UPF3BQ9BZI7 483 aaKnown RBP12.43□□□□□ -0.42
ERCC3-201ENST00000285398 DDX58O95786 925 aaKnown RBP12.42□□□□□ -0.42
ERCC3-201ENST00000285398 TNNT1P13805 278 aa12.42□□□□□ -0.42
ERCC3-201ENST00000285398 PTGS1P23219 599 aa12.42□□□□□ -0.42
ERCC3-201ENST00000285398 KCNJ4P48050 445 aa12.42□□□□□ -0.42
ERCC3-201ENST00000285398 LINC00116Q8NCU8 138 aa12.42□□□□□ -0.42
ERCC3-201ENST00000285398 STX6O43752 255 aa12.42□□□□□ -0.42
ERCC3-201ENST00000285398 SLC20A2Q08357 652 aa12.42□□□□□ -0.42
ERCC3-201ENST00000285398 AMIGO3Q86WK7 504 aa12.42□□□□□ -0.42
ERCC3-201ENST00000285398 FAM200AQ8TCP9 573 aa12.42□□□□□ -0.42
ERCC3-201ENST00000285398 C16orf45Q96MC5 204 aaPredicted RBP12.42□□□□□ -0.42
ERCC3-201ENST00000285398 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.42□□□□□ -0.42
ERCC3-201ENST00000285398 FIBPO43427 364 aa12.41□□□□□ -0.42
ERCC3-201ENST00000285398 IRX5P78411 483 aaPredicted RBP12.41□□□□□ -0.42
ERCC3-201ENST00000285398 HLFQ16534 295 aa12.41□□□□□ -0.42
ERCC3-201ENST00000285398 TSHZ3Q63HK5 1081 aa12.41□□□□□ -0.42
ERCC3-201ENST00000285398 INTS5Q6P9B9 1019 aaKnown RBP12.41□□□□□ -0.42
ERCC3-201ENST00000285398 CREBRFQ8IUR6 639 aa12.41□□□□□ -0.42
ERCC3-201ENST00000285398 C9orf78Q9NZ63 289 aaPredicted RBP12.41□□□□□ -0.42
ERCC3-201ENST00000285398 CALCOCO1Q9P1Z2 691 aa12.41□□□□□ -0.42
ERCC3-201ENST00000285398 PNMA6EA0A0J9YXQ4 647 aa12.41□□□□□ -0.42
ERCC3-201ENST00000285398 F13A1P00488 732 aa12.41□□□□□ -0.42
ERCC3-201ENST00000285398 UBTFL1P0CB47 393 aaPredicted RBP12.41□□□□□ -0.42
ERCC3-201ENST00000285398 GPTP24298 496 aa12.41□□□□□ -0.42
ERCC3-201ENST00000285398 DNAJC2Q99543 621 aaKnown RBP12.41□□□□□ -0.42
ERCC3-201ENST00000285398 LRRCC1Q9C099 1032 aa12.41□□□□□ -0.42
ERCC3-201ENST00000285398 CCNL1Q9UK58 526 aaPredicted RBP12.41□□□□□ -0.42
ERCC3-201ENST00000285398 BRWD3Q6RI45 1802 aa12.4□□□□□ -0.42
ERCC3-201ENST00000285398 HSPA4P34932 840 aa12.4□□□□□ -0.42
ERCC3-201ENST00000285398 ZNF397Q8NF99 534 aaPredicted RBP12.4□□□□□ -0.42
ERCC3-201ENST00000285398 METTL22Q9BUU2 404 aaPredicted RBP12.4□□□□□ -0.42
ERCC3-201ENST00000285398 TEX13AQ9BXU3 409 aaPredicted RBP12.4□□□□□ -0.42
ERCC3-201ENST00000285398 LRRC4BQ9NT99 713 aa12.4□□□□□ -0.42
ERCC3-201ENST00000285398 STAP2Q9UGK3 403 aa12.4□□□□□ -0.42
ERCC3-201ENST00000285398 EXOC6BQ9Y2D4 811 aa12.4□□□□□ -0.42
ERCC3-201ENST00000285398 NEURL1BA8MQ27 555 aa12.4□□□□□ -0.43
ERCC3-201ENST00000285398 SYT1P21579 422 aa12.4□□□□□ -0.43
ERCC3-201ENST00000285398 CCDC186Q7Z3E2 898 aa12.4□□□□□ -0.43
ERCC3-201ENST00000285398 DRC7Q8IY82 874 aa12.4□□□□□ -0.43
ERCC3-201ENST00000285398 LINS1Q8NG48 757 aa12.4□□□□□ -0.43
ERCC3-201ENST00000285398 PLBD2Q8NHP8 589 aa12.4□□□□□ -0.43
ERCC3-201ENST00000285398 ZBTB22O15209 634 aa12.39□□□□□ -0.43
ERCC3-201ENST00000285398 GNAI2P04899 355 aa12.39□□□□□ -0.43
ERCC3-201ENST00000285398 NEXNQ0ZGT2 675 aa12.39□□□□□ -0.43
ERCC3-201ENST00000285398 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.39□□□□□ -0.43
ERCC3-201ENST00000285398 SYNE4Q8N205 404 aa12.39□□□□□ -0.43
ERCC3-201ENST00000285398 SMARCC1Q92922 1105 aaPredicted RBP12.39□□□□□ -0.43
ERCC3-201ENST00000285398 CCDC87Q9NVE4 849 aa12.39□□□□□ -0.43
ERCC3-201ENST00000285398 CACNA1FO60840 1977 aa12.39□□□□□ -0.43
ERCC3-201ENST00000285398 AOX1Q06278 1338 aa12.39□□□□□ -0.43
ERCC3-201ENST00000285398 VGLL3A8MV65 326 aa12.39□□□□□ -0.43
ERCC3-201ENST00000285398 TRIM6-TRIM34B2RNG4 842 aa12.39□□□□□ -0.43
ERCC3-201ENST00000285398 FAM196AQ6ZSG2 479 aa12.39□□□□□ -0.43
ERCC3-201ENST00000285398 UBE3BQ7Z3V4 1068 aa12.39□□□□□ -0.43
ERCC3-201ENST00000285398 RILPL2Q969X0 211 aa12.39□□□□□ -0.43
ERCC3-201ENST00000285398 TPD52L1Q16890 204 aaPredicted RBP12.38□□□□□ -0.43
ERCC3-201ENST00000285398 DZIP3Q86Y13 1208 aaKnown RBP12.38□□□□□ -0.43
ERCC3-201ENST00000285398 SMC3Q9UQE7 1217 aa12.38□□□□□ -0.43
ERCC3-201ENST00000285398 GCKRQ14397 625 aa12.38□□□□□ -0.43
ERCC3-201ENST00000285398 MYH14Q7Z406 1995 aaKnown RBP12.37□□□□□ -0.43
ERCC3-201ENST00000285398 A0A087WZG4 1122 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 GRM8O00222 908 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 GNAI3P08754 354 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 MAP3K11Q16584 847 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 EPHA10Q5JZY3 1008 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 ZSCAN25Q6NSZ9 544 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 ILDR1Q86SU0 546 aaPredicted RBP12.37□□□□□ -0.43
ERCC3-201ENST00000285398 SUCLG2Q96I99 432 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 TTC14Q96N46 770 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 GNPATO15228 680 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 CEP135Q66GS9 1140 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 KIF6Q6ZMV9 814 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 KAZALD1Q96I82 304 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 CCDC85AQ96PX6 553 aaPredicted RBP12.37□□□□□ -0.43
ERCC3-201ENST00000285398 TSPYL1Q9H0U9 437 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 IL25Q9H293 177 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 LIMCH1Q9UPQ0 1083 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 BTAF1O14981 1849 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 LAMB4A4D0S4 1761 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 RAD50Q92878 1312 aa12.37□□□□□ -0.43
ERCC3-201ENST00000285398 EIF5P55010 431 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms