RNA–Protein interactions for RNA: ENST00000279804.2

CTF1-201, Transcript of cardiotrophin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTF1, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-201ENST00000279804 PUS3Q9BZE2 481 aaKnown RBP29.56■■■□□ 2.32
CTF1-201ENST00000279804 DUOX1Q9NRD9 1551 aa29.55■■■□□ 2.32
CTF1-201ENST00000279804 TMX4Q9H1E5 349 aaPredicted RBP29.55■■■□□ 2.32
CTF1-201ENST00000279804 GPSM2P81274 684 aa29.53■■■□□ 2.32
CTF1-201ENST00000279804 PTPN12Q05209 780 aaKnown RBP29.53■■■□□ 2.32
CTF1-201ENST00000279804 CC2D2BQ6DHV5 1058 aa29.53■■■□□ 2.32
CTF1-201ENST00000279804 LDHAL6AQ6ZMR3 332 aa29.53■■■□□ 2.32
CTF1-201ENST00000279804 CHMP4BQ9H444 224 aaKnown RBP29.53■■■□□ 2.32
CTF1-201ENST00000279804 MINPP1Q9UNW1 487 aa29.53■■■□□ 2.32
CTF1-201ENST00000279804 PA2G4Q9UQ80 394 aaKnown RBP29.53■■■□□ 2.32
CTF1-201ENST00000279804 CEP85Q6P2H3 762 aa29.53■■■□□ 2.32
CTF1-201ENST00000279804 NSFL1CQ9UNZ2 370 aaKnown RBP29.53■■■□□ 2.32
CTF1-201ENST00000279804 ATP8B2P98198 1209 aa29.52■■■□□ 2.32
CTF1-201ENST00000279804 RTKN2Q8IZC4 609 aa29.52■■■□□ 2.32
CTF1-201ENST00000279804 MPNDQ8N594 471 aa29.52■■■□□ 2.32
CTF1-201ENST00000279804 CNNM1Q9NRU3 951 aa29.52■■■□□ 2.32
CTF1-201ENST00000279804 PCDHB15Q9Y5E8 787 aa29.52■■■□□ 2.32
CTF1-201ENST00000279804 DICER1Q9UPY3 1922 aaKnown RBP29.52■■■□□ 2.32
CTF1-201ENST00000279804 PRELPP51888 382 aa29.51■■■□□ 2.31
CTF1-201ENST00000279804 LRRC24Q50LG9 513 aa29.51■■■□□ 2.31
CTF1-201ENST00000279804 SIL1Q9H173 461 aa29.51■■■□□ 2.31
CTF1-201ENST00000279804 DPP8Q6V1X1 898 aaPredicted RBP29.5■■■□□ 2.31
CTF1-201ENST00000279804 TAOK3Q9H2K8 898 aa29.5■■■□□ 2.31
CTF1-201ENST00000279804 AAMPQ13685 434 aa29.5■■■□□ 2.31
CTF1-201ENST00000279804 ANKIB1Q9P2G1 1089 aa29.5■■■□□ 2.31
CTF1-201ENST00000279804 WTIPA6NIX2 430 aaPredicted RBP29.49■■■□□ 2.31
CTF1-201ENST00000279804 FKBP4Q02790 459 aaKnown RBP eCLIP29.49■■■□□ 2.31
CTF1-201ENST00000279804 CHRNDQ07001 517 aa29.49■■■□□ 2.31
CTF1-201ENST00000279804 HELBQ8NG08 1087 aaPredicted RBP29.49■■■□□ 2.31
CTF1-201ENST00000279804 POLA2Q14181 598 aa29.47■■■□□ 2.31
CTF1-201ENST00000279804 SSH3Q8TE77 659 aa29.47■■■□□ 2.31
CTF1-201ENST00000279804 ZNF277Q9NRM2 450 aaPredicted RBP29.47■■■□□ 2.31
CTF1-201ENST00000279804 PPP4R2Q9NY27 417 aa29.47■■■□□ 2.31
CTF1-201ENST00000279804 RIPOR2Q9Y4F9 1068 aa29.47■■■□□ 2.31
CTF1-201ENST00000279804 LTBP3Q9NS15 1303 aa29.47■■■□□ 2.31
CTF1-201ENST00000279804 TAF5LO75529 589 aa29.47■■■□□ 2.31
CTF1-201ENST00000279804 GPR101Q96P66 508 aaPredicted RBP29.47■■■□□ 2.31
CTF1-201ENST00000279804 PSMD1Q99460 953 aa29.47■■■□□ 2.31
CTF1-201ENST00000279804 COPRSQ9NQ92 184 aa29.47■■■□□ 2.31
CTF1-201ENST00000279804 POLLQ9UGP5 575 aa29.47■■■□□ 2.31
CTF1-201ENST00000279804 TIAM2Q8IVF5 1701 aa29.46■■■□□ 2.31
CTF1-201ENST00000279804 XDHP47989 1333 aa29.46■■■□□ 2.31
CTF1-201ENST00000279804 GRIPAP1Q4V328 841 aa29.46■■■□□ 2.31
CTF1-201ENST00000279804 SIRT2Q8IXJ6 389 aa29.46■■■□□ 2.31
CTF1-201ENST00000279804 PODXL2Q9NZ53 605 aa29.46■■■□□ 2.31
CTF1-201ENST00000279804 EYA2O00167 538 aa29.45■■■□□ 2.31
CTF1-201ENST00000279804 ATG9AQ7Z3C6 839 aa29.44■■■□□ 2.3
CTF1-201ENST00000279804 TBC1D16Q8TBP0 767 aa29.44■■■□□ 2.3
CTF1-201ENST00000279804 RTFDC1Q9BY42 306 aaPredicted RBP29.44■■■□□ 2.3
CTF1-201ENST00000279804 C6orf229H3BNL8 230 aa29.44■■■□□ 2.3
CTF1-201ENST00000279804 SNAP23O00161 211 aa29.44■■■□□ 2.3
CTF1-201ENST00000279804 UFL1O94874 794 aa29.44■■■□□ 2.3
CTF1-201ENST00000279804 B4GALNT3Q6L9W6 998 aa29.44■■■□□ 2.3
CTF1-201ENST00000279804 RPAP2Q8IXW5 612 aaPredicted RBP29.44■■■□□ 2.3
CTF1-201ENST00000279804 COL4A5P29400 1685 aa29.43■■■□□ 2.3
CTF1-201ENST00000279804 ANKRD2Q9GZV1 360 aa29.43■■■□□ 2.3
CTF1-201ENST00000279804 GGA1Q9UJY5 639 aa29.43■■■□□ 2.3
CTF1-201ENST00000279804 LMNB1P20700 586 aa29.41■■■□□ 2.3
CTF1-201ENST00000279804 METTL24Q5JXM2 366 aa29.41■■■□□ 2.3
CTF1-201ENST00000279804 MROH5Q6ZUA9 1318 aa29.41■■■□□ 2.3
CTF1-201ENST00000279804 AOC3Q16853 763 aa29.4■■■□□ 2.3
CTF1-201ENST00000279804 C9orf131Q5VYM1 1079 aa29.4■■■□□ 2.3
CTF1-201ENST00000279804 RNF181Q9P0P0 153 aa29.4■■■□□ 2.3
CTF1-201ENST00000279804 CIAO1O76071 339 aa29.4■■■□□ 2.3
CTF1-201ENST00000279804 IARSP41252 1262 aaKnown RBP29.4■■■□□ 2.3
CTF1-201ENST00000279804 SUPT20HQ8NEM7 779 aa29.4■■■□□ 2.3
CTF1-201ENST00000279804 RIMBP2O15034 1052 aa29.39■■■□□ 2.3
CTF1-201ENST00000279804 FBXO3Q9UK99 471 aa29.39■■■□□ 2.3
CTF1-201ENST00000279804 SURF6O75683 361 aaKnown RBP29.38■■■□□ 2.29
CTF1-201ENST00000279804 ATP2B4P23634 1241 aa29.38■■■□□ 2.29
CTF1-201ENST00000279804 VGLL2Q8N8G2 317 aa29.38■■■□□ 2.29
CTF1-201ENST00000279804 CCDC136Q96JN2 1154 aa29.38■■■□□ 2.29
CTF1-201ENST00000279804 ZNF804BA4D1E1 1349 aa29.38■■■□□ 2.29
CTF1-201ENST00000279804 PPIP5K2O43314 1243 aa29.37■■■□□ 2.29
CTF1-201ENST00000279804 WASHC4Q2M389 1173 aa29.37■■■□□ 2.29
CTF1-201ENST00000279804 IGHDP01880 384 aa29.37■■■□□ 2.29
CTF1-201ENST00000279804 KLRK1P26718 216 aa29.37■■■□□ 2.29
CTF1-201ENST00000279804 IL15P40933 162 aaPredicted RBP29.37■■■□□ 2.29
CTF1-201ENST00000279804 KCNJ4P48050 445 aa29.37■■■□□ 2.29
CTF1-201ENST00000279804 LEMD3Q9Y2U8 911 aa29.37■■■□□ 2.29
CTF1-201ENST00000279804 PDE8BO95263 885 aa29.36■■■□□ 2.29
CTF1-201ENST00000279804 G3BP1Q13283 466 aaKnown RBP eCLIP29.36■■■□□ 2.29
CTF1-201ENST00000279804 LARGE2Q8N3Y3 721 aa29.36■■■□□ 2.29
CTF1-201ENST00000279804 EXOC6BQ9Y2D4 811 aa29.36■■■□□ 2.29
CTF1-201ENST00000279804 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.36■■■□□ 2.29
CTF1-201ENST00000279804 HMMRO75330 724 aa29.35■■■□□ 2.29
CTF1-201ENST00000279804 KIAA2012Q0VF49 1180 aa29.35■■■□□ 2.29
CTF1-201ENST00000279804 TXNRD3Q86VQ6 643 aa29.35■■■□□ 2.29
CTF1-201ENST00000279804 EYA3Q99504 573 aa29.34■■■□□ 2.29
CTF1-201ENST00000279804 NOP58Q9Y2X3 529 aaKnown RBP29.34■■■□□ 2.29
CTF1-201ENST00000279804 TFCP2Q12800 502 aa29.34■■■□□ 2.29
CTF1-201ENST00000279804 SASH1O94885 1247 aa29.33■■■□□ 2.29
CTF1-201ENST00000279804 OS9Q13438 667 aaPredicted RBP29.33■■■□□ 2.29
CTF1-201ENST00000279804 ZC3H12CQ9C0D7 883 aaKnown RBP29.33■■■□□ 2.29
CTF1-201ENST00000279804 CEP126Q9P2H0 1117 aa29.33■■■□□ 2.29
CTF1-201ENST00000279804 SCN9AQ15858 1988 aa29.33■■■□□ 2.29
CTF1-201ENST00000279804 ARAP2Q8WZ64 1704 aa29.32■■■□□ 2.28
CTF1-201ENST00000279804 HDAC1Q13547 482 aaPredicted RBP29.32■■■□□ 2.28
CTF1-201ENST00000279804 MED23Q9ULK4 1368 aa29.32■■■□□ 2.28
CTF1-201ENST00000279804 DOK7Q18PE1 504 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms