RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 ABCC10Q5T3U5 1492 aa13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 CCDC151A5D8V7 595 aa13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 BAG1Q99933 345 aaPredicted RBP13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 VPS18Q9P253 973 aa13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 SPG7Q9UQ90 795 aa13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 BRF1Q92994 677 aa13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 PPP1R12BO60237 982 aaPredicted RBP13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 NLRP6P59044 892 aa13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 IQGAP1P46940 1657 aa13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 HOXB7P09629 217 aa13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 MAP2K2P36507 400 aa13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 DDX41Q9UJV9 622 aaKnown RBP13.34□□□□□ -0.27
DNMT3A-201ENST00000264709 SGSM2O43147 1006 aa13.33□□□□□ -0.27
DNMT3A-201ENST00000264709 TERF2Q15554 542 aa13.33□□□□□ -0.27
DNMT3A-201ENST00000264709 FMNL3Q8IVF7 1028 aa13.33□□□□□ -0.27
DNMT3A-201ENST00000264709 NUTM2FA1L443 756 aa13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 NUTM2GQ5VZR2 741 aa13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 CCDC9Q9Y3X0 531 aaKnown RBP13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 MSL1Q68DK7 614 aa13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 RAB34Q9BZG1 259 aa13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 MADDQ8WXG6 1647 aa13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 ATP6V1AP38606 617 aa13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 RAI14Q9P0K7 980 aa13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 ETF1P62495 437 aaKnown RBP13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 CCDC51Q96ER9 411 aa13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 CEP126Q9P2H0 1117 aa13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 PPIP5K1Q6PFW1 1433 aa13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 USP19O94966 1318 aa13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 QRICH2Q9H0J4 1663 aa13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 ERBB4Q15303 1308 aa13.33□□□□□ -0.28
DNMT3A-201ENST00000264709 CROCCP2Q86T23 111 aa13.32□□□□□ -0.28
DNMT3A-201ENST00000264709 EFCAB13Q8IY85 973 aa13.32□□□□□ -0.28
DNMT3A-201ENST00000264709 JADE2Q9NQC1 790 aa13.32□□□□□ -0.28
DNMT3A-201ENST00000264709 MYO1AQ9UBC5 1043 aa13.32□□□□□ -0.28
DNMT3A-201ENST00000264709 FAM71BQ8TC56 605 aa13.32□□□□□ -0.28
DNMT3A-201ENST00000264709 ZNF215Q9UL58 517 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-201ENST00000264709 CUL4AQ13619 759 aa13.32□□□□□ -0.28
DNMT3A-201ENST00000264709 NEFHP12036 1026 aa13.32□□□□□ -0.28
DNMT3A-201ENST00000264709 IFFO1Q0D2I5 559 aa13.32□□□□□ -0.28
DNMT3A-201ENST00000264709 TICAM2Q86XR7 235 aa13.32□□□□□ -0.28
DNMT3A-201ENST00000264709 TARBP1Q13395 1621 aaKnown RBP13.32□□□□□ -0.28
DNMT3A-201ENST00000264709 WDHD1O75717 1129 aaPredicted RBP13.32□□□□□ -0.28
DNMT3A-201ENST00000264709 TRIM21P19474 475 aaKnown RBP13.32□□□□□ -0.28
DNMT3A-201ENST00000264709 A0A1W2PP64 1363 aa13.32□□□□□ -0.28
DNMT3A-201ENST00000264709 EDC4Q6P2E9 1401 aaKnown RBP13.32□□□□□ -0.28
DNMT3A-201ENST00000264709 TTC39AQ5SRH9 613 aa13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 CNKSR2Q8WXI2 1034 aa13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 MEIS3Q99687 375 aa13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 TTF1Q15361 905 aaPredicted RBP13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 WWC2Q6AWC2 1192 aa13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 CPSF2Q9P2I0 782 aaKnown RBP13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 INPP5BP32019 993 aa13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 THUMPD2Q9BTF0 503 aaKnown RBP13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 MAP3K4Q9Y6R4 1608 aa13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 LEO1Q8WVC0 666 aaPredicted RBP13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 CBX8Q9HC52 389 aa13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 EVA1CP58658 441 aa13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 RNF187Q5TA31 235 aaPredicted RBP13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 ZNF530Q6P9A1 599 aaPredicted RBP13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 N4BP3O15049 544 aa13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 ENOX2Q16206 610 aaKnown RBP13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 SYT10Q6XYQ8 523 aa13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 TRERF1Q96PN7 1200 aa13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 NPATQ14207 1427 aa13.31□□□□□ -0.28
DNMT3A-201ENST00000264709 TACC1O75410 805 aa13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 KCNJ6P48051 423 aa13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 MICALL1Q8N3F8 863 aa13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 RBM8AQ9Y5S9 174 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 ZNF608Q9ULD9 1512 aaPredicted RBP13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 TTC21AQ8NDW8 1320 aa13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 TMTC2Q8N394 836 aa13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 TFIP11Q9UBB9 837 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 FYB1O15117 783 aa13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 PLCD4Q9BRC7 762 aa13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 SETBP1Q9Y6X0 1596 aa13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 IFNKQ9P0W0 207 aa13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 RNF17Q9BXT8 1623 aaKnown RBP13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 MCM10Q7L590 875 aa13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 PRPHP41219 470 aa13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 PPP1R2P41236 205 aa13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 LRRC8AQ8IWT6 810 aa13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 NCOA7Q8NI08 942 aa13.3□□□□□ -0.28
DNMT3A-201ENST00000264709 OAS2P29728 719 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 ERVK-7P63135 1459 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 BTBD11A6QL63 1104 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 AMPD3Q01432 767 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 NAPGQ99747 312 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 MAP2K1Q02750 393 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 TMTC1Q8IUR5 882 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 MAP2P11137 1827 aaKnown RBP13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 KIF5AQ12840 1032 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 IFT74Q96LB3 600 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 AKR1B15C9JRZ8 316 aaPredicted RBP13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 LRRC27Q9C0I9 530 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 GOLGA6CA6NDK9 693 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 GOLGA6DP0CG33 693 aa13.29□□□□□ -0.28
DNMT3A-201ENST00000264709 SEPT7Q16181 437 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms