RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 LUZP1Q86V48 1076 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 N4BP2L2Q92802 583 aaPredicted RBP9.7□□□□□ -0.86
LDB3-201ENST00000263066 FMNL2Q96PY5 1086 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 MYD88Q99836 296 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 UBR1Q8IWV7 1749 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 CCDC171Q6TFL3 1326 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 PRAMEF22A3QJZ6 481 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 CLCN6P51797 869 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 AMOTQ4VCS5 1084 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 PACS2Q86VP3 889 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 TNMDQ9H2S6 317 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 DNAI1Q9UI46 699 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 SMARCA5O60264 1052 aaPredicted RBP9.69□□□□□ -0.86
LDB3-201ENST00000263066 KIF6Q6ZMV9 814 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 ARHGEF25Q86VW2 580 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 CHPF2Q9P2E5 772 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 A0A1B0GUA9 196 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 RLBP1P12271 317 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 ATP2B2Q01814 1243 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 PSMD2Q13200 908 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 CWC27Q6UX04 472 aaKnown RBP9.69□□□□□ -0.86
LDB3-201ENST00000263066 STK11IPQ8N1F8 1099 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 SH3BP1Q9Y3L3 701 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 TULP4Q9NRJ4 1543 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 WDR33Q9C0J8 1336 aaKnown RBP9.69□□□□□ -0.86
LDB3-201ENST00000263066 PI4KAP2A4QPH2 592 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 KCNQ2O43526 872 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 HMMRO75330 724 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 UBTFL1P0CB47 393 aaPredicted RBP9.69□□□□□ -0.86
LDB3-201ENST00000263066 MX1P20591 662 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 ANKRD18AQ8IVF6 992 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 PI4KAP1Q8N8J0 262 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 MED4Q9NPJ6 270 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 ANO2Q9NQ90 1003 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 SPATS2LQ9NUQ6 558 aaKnown RBP9.69□□□□□ -0.86
LDB3-201ENST00000263066 ADAMTS13Q76LX8 1427 aa9.69□□□□□ -0.86
LDB3-201ENST00000263066 SURF6O75683 361 aaKnown RBP9.68□□□□□ -0.86
LDB3-201ENST00000263066 STARD3NLO95772 234 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 RBM6P78332 1123 aaKnown RBP9.68□□□□□ -0.86
LDB3-201ENST00000263066 RNF187Q5TA31 235 aaPredicted RBP9.68□□□□□ -0.86
LDB3-201ENST00000263066 COPS6Q7L5N1 327 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 NBPF5PQ86XG9 351 aaPredicted RBP9.68□□□□□ -0.86
LDB3-201ENST00000263066 IL1RAPL2Q9NP60 686 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 NRBP1Q9UHY1 535 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 ASAP1Q9ULH1 1129 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 SPATA31D1Q6ZQQ2 1576 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 CAND2O75155 1236 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 ZPR1O75312 459 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 MAP3K11Q16584 847 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 NUP62CLQ9H1M0 184 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 PHAXQ9H814 394 aaKnown RBP9.68□□□□□ -0.86
LDB3-201ENST00000263066 FBXO3Q9UK99 471 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 ANAPC15P60006 121 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 VPS37DQ86XT2 251 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 SEPT12Q8IYM1 358 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 SMC3Q9UQE7 1217 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 SPATA31A3Q5VYP0 1347 aa9.68□□□□□ -0.86
LDB3-201ENST00000263066 MAP4K4O95819 1239 aaPredicted RBP9.67□□□□□ -0.86
LDB3-201ENST00000263066 DNAJC10Q8IXB1 793 aa9.67□□□□□ -0.86
LDB3-201ENST00000263066 CNPY2Q9Y2B0 182 aa9.67□□□□□ -0.86
LDB3-201ENST00000263066 CD163L1Q9NR16 1453 aa9.67□□□□□ -0.86
LDB3-201ENST00000263066 EBAG9O00559 213 aa9.67□□□□□ -0.86
LDB3-201ENST00000263066 GNPATO15228 680 aa9.67□□□□□ -0.86
LDB3-201ENST00000263066 SSBP05455 408 aaKnown RBP eCLIP9.67□□□□□ -0.86
LDB3-201ENST00000263066 ADAM21Q9UKJ8 722 aa9.67□□□□□ -0.86
LDB3-201ENST00000263066 C3P01024 1663 aa9.67□□□□□ -0.86
LDB3-201ENST00000263066 SHTN1A0MZ66 631 aa9.67□□□□□ -0.86
LDB3-201ENST00000263066 ERLIN1O75477 346 aa9.67□□□□□ -0.86
LDB3-201ENST00000263066 HMGB1P09429 215 aaKnown RBP9.67□□□□□ -0.86
LDB3-201ENST00000263066 ADRA2BP18089 450 aa9.67□□□□□ -0.86
LDB3-201ENST00000263066 RBBP5Q15291 538 aaKnown RBP9.67□□□□□ -0.86
LDB3-201ENST00000263066 MUM1L1Q5H9M0 696 aa9.67□□□□□ -0.86
LDB3-201ENST00000263066 JAKMIP3Q5VZ66 844 aa9.67□□□□□ -0.86
LDB3-201ENST00000263066 TMEM57Q8N5G2 664 aa9.67□□□□□ -0.86
LDB3-201ENST00000263066 MRFAP1L1Q96HT8 127 aa9.67□□□□□ -0.86
LDB3-201ENST00000263066 ZNF496Q96IT1 587 aaPredicted RBP9.67□□□□□ -0.86
LDB3-201ENST00000263066 TRIM6Q9C030 488 aaPredicted RBP9.67□□□□□ -0.86
LDB3-201ENST00000263066 SUDS3Q9H7L9 328 aaPredicted RBP9.67□□□□□ -0.86
LDB3-201ENST00000263066 ALKQ9UM73 1620 aa9.67□□□□□ -0.86
LDB3-201ENST00000263066 IPO7O95373 1038 aaKnown RBP9.66□□□□□ -0.86
LDB3-201ENST00000263066 CT47B1P0C2W7 299 aaPredicted RBP9.66□□□□□ -0.86
LDB3-201ENST00000263066 RXRBP28702 533 aa9.66□□□□□ -0.86
LDB3-201ENST00000263066 XAGE3Q8WTP9 111 aa9.66□□□□□ -0.86
LDB3-201ENST00000263066 SMARCC1Q92922 1105 aaPredicted RBP9.66□□□□□ -0.86
LDB3-201ENST00000263066 UPF3BQ9BZI7 483 aaKnown RBP9.66□□□□□ -0.86
LDB3-201ENST00000263066 EXOC6BQ9Y2D4 811 aa9.66□□□□□ -0.86
LDB3-201ENST00000263066 CCP110O43303 1012 aa9.66□□□□□ -0.86
LDB3-201ENST00000263066 RAD21O60216 631 aa9.66□□□□□ -0.86
LDB3-201ENST00000263066 KIF4AO95239 1232 aa9.66□□□□□ -0.86
LDB3-201ENST00000263066 RFC4P35249 363 aa9.66□□□□□ -0.86
LDB3-201ENST00000263066 EVCP57679 992 aa9.66□□□□□ -0.86
LDB3-201ENST00000263066 ZSCAN25Q6NSZ9 544 aa9.66□□□□□ -0.86
LDB3-201ENST00000263066 NUP133Q8WUM0 1156 aa9.66□□□□□ -0.86
LDB3-201ENST00000263066 KDM5AP29375 1690 aaKnown RBP9.66□□□□□ -0.86
LDB3-201ENST00000263066 ZNF165P49910 485 aa9.66□□□□□ -0.86
LDB3-201ENST00000263066 RARSP54136 660 aaKnown RBP9.66□□□□□ -0.86
LDB3-201ENST00000263066 ARMCX6Q7L4S7 300 aa9.66□□□□□ -0.86
LDB3-201ENST00000263066 ERC1Q8IUD2 1116 aa9.66□□□□□ -0.86
LDB3-201ENST00000263066 FAM200AQ8TCP9 573 aa9.66□□□□□ -0.86
LDB3-201ENST00000263066 CCDC97Q96F63 343 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms