RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 ANKRD18BA2A2Z9 1011 aa23.28■■□□□ 1.32
COPE-201ENST00000262812 NBPF7P0C2Y1 421 aaPredicted RBP23.28■■□□□ 1.32
COPE-201ENST00000262812 HSPA6P17066 643 aa23.28■■□□□ 1.32
COPE-201ENST00000262812 MPHOSPH8Q99549 860 aa23.28■■□□□ 1.32
COPE-201ENST00000262812 TAF1DQ9H5J8 278 aaPredicted RBP23.28■■□□□ 1.32
COPE-201ENST00000262812 DBNDD1Q9H9R9 158 aa23.28■■□□□ 1.32
COPE-201ENST00000262812 HACL1Q9UJ83 578 aa23.28■■□□□ 1.32
COPE-201ENST00000262812 WTIPA6NIX2 430 aaPredicted RBP23.27■■□□□ 1.32
COPE-201ENST00000262812 POTEIP0CG38 1075 aa23.27■■□□□ 1.32
COPE-201ENST00000262812 POTEJP0CG39 1038 aa23.27■■□□□ 1.32
COPE-201ENST00000262812 FSTL1Q12841 308 aa23.27■■□□□ 1.32
COPE-201ENST00000262812 IFIT5Q13325 482 aaKnown RBP23.27■■□□□ 1.32
COPE-201ENST00000262812 EAPPQ56P03 285 aaPredicted RBP23.27■■□□□ 1.32
COPE-201ENST00000262812 SUCLG2Q96I99 432 aa23.27■■□□□ 1.32
COPE-201ENST00000262812 WDR90Q96KV7 1748 aa23.26■■□□□ 1.31
COPE-201ENST00000262812 G3V3G9 751 aa23.26■■□□□ 1.31
COPE-201ENST00000262812 DCAF8Q5TAQ9 597 aa23.26■■□□□ 1.31
COPE-201ENST00000262812 XDHP47989 1333 aa23.26■■□□□ 1.31
COPE-201ENST00000262812 YDJCA8MPS7 323 aa23.25■■□□□ 1.31
COPE-201ENST00000262812 ATP2B4P23634 1241 aa23.25■■□□□ 1.31
COPE-201ENST00000262812 LMOD1P29536 600 aaPredicted RBP23.25■■□□□ 1.31
COPE-201ENST00000262812 EPHX2P34913 555 aa23.25■■□□□ 1.31
COPE-201ENST00000262812 CIAPIN1Q6FI81 312 aa23.25■■□□□ 1.31
COPE-201ENST00000262812 DUOX1Q9NRD9 1551 aa23.24■■□□□ 1.31
COPE-201ENST00000262812 EPS15P42566 896 aa23.24■■□□□ 1.31
COPE-201ENST00000262812 TNIP1Q15025 636 aa23.24■■□□□ 1.31
COPE-201ENST00000262812 CCDC57Q2TAC2 916 aa23.24■■□□□ 1.31
COPE-201ENST00000262812 KCNQ5Q9NR82 932 aa23.24■■□□□ 1.31
COPE-201ENST00000262812 CLEC11AQ9Y240 323 aa23.24■■□□□ 1.31
COPE-201ENST00000262812 ECE2O60344 883 aa23.23■■□□□ 1.31
COPE-201ENST00000262812 TAF7LQ5H9L4 462 aa23.23■■□□□ 1.31
COPE-201ENST00000262812 KAZALD1Q96I82 304 aa23.23■■□□□ 1.31
COPE-201ENST00000262812 ZNF594Q96JF6 807 aaPredicted RBP23.23■■□□□ 1.31
COPE-201ENST00000262812 API5Q9BZZ5 524 aaKnown RBP23.23■■□□□ 1.31
COPE-201ENST00000262812 USP44Q9H0E7 712 aa23.23■■□□□ 1.31
COPE-201ENST00000262812 BCAR3O75815 825 aa23.22■■□□□ 1.31
COPE-201ENST00000262812 GMPSP49915 693 aaPredicted RBP23.22■■□□□ 1.31
COPE-201ENST00000262812 SCNN1DP51172 638 aa23.22■■□□□ 1.31
COPE-201ENST00000262812 BRPF1P55201 1214 aaPredicted RBP23.22■■□□□ 1.31
COPE-201ENST00000262812 CHADLQ6NUI6 762 aa23.22■■□□□ 1.31
COPE-201ENST00000262812 UTYO14607 1347 aa23.22■■□□□ 1.31
COPE-201ENST00000262812 LRRC37AA6NMS7 1700 aa23.22■■□□□ 1.31
COPE-201ENST00000262812 CCT4P50991 539 aaKnown RBP23.21■■□□□ 1.31
COPE-201ENST00000262812 FRAT1Q92837 279 aaPredicted RBP23.21■■□□□ 1.31
COPE-201ENST00000262812 ANKRD2Q9GZV1 360 aa23.21■■□□□ 1.31
COPE-201ENST00000262812 BICC1Q9H694 974 aaKnown RBP23.21■■□□□ 1.31
COPE-201ENST00000262812 ZBED9Q6R2W3 1325 aa23.2■■□□□ 1.3
COPE-201ENST00000262812 CHRNDQ07001 517 aa23.2■■□□□ 1.3
COPE-201ENST00000262812 HELBQ8NG08 1087 aaPredicted RBP23.2■■□□□ 1.3
COPE-201ENST00000262812 ZBTB12Q9Y330 459 aaPredicted RBP23.2■■□□□ 1.3
COPE-201ENST00000262812 PSMD14O00487 310 aa23.19■■□□□ 1.3
COPE-201ENST00000262812 APLP1P51693 650 aa23.19■■□□□ 1.3
COPE-201ENST00000262812 LDHAL6AQ6ZMR3 332 aa23.19■■□□□ 1.3
COPE-201ENST00000262812 PNMA8AQ86V59 439 aaPredicted RBP23.19■■□□□ 1.3
COPE-201ENST00000262812 LDHDQ86WU2 507 aa23.19■■□□□ 1.3
COPE-201ENST00000262812 GPRC5DQ9NZD1 345 aa23.19■■□□□ 1.3
COPE-201ENST00000262812 PLIN1O60240 522 aa23.18■■□□□ 1.3
COPE-201ENST00000262812 TAF5LO75529 589 aa23.18■■□□□ 1.3
COPE-201ENST00000262812 KCNJ4P48050 445 aa23.18■■□□□ 1.3
COPE-201ENST00000262812 HTRA3P83110 453 aa23.18■■□□□ 1.3
COPE-201ENST00000262812 CNNM1Q9NRU3 951 aa23.18■■□□□ 1.3
COPE-201ENST00000262812 LEMD3Q9Y2U8 911 aa23.18■■□□□ 1.3
COPE-201ENST00000262812 ZNF804BA4D1E1 1349 aa23.17■■□□□ 1.3
COPE-201ENST00000262812 KIF16BQ96L93 1317 aa23.17■■□□□ 1.3
COPE-201ENST00000262812 ANKRD44Q8N8A2 993 aa23.17■■□□□ 1.3
COPE-201ENST00000262812 ARHGAP45Q92619 1136 aa23.17■■□□□ 1.3
COPE-201ENST00000262812 SNAP23O00161 211 aa23.16■■□□□ 1.3
COPE-201ENST00000262812 IPO8O15397 1037 aaKnown RBP23.16■■□□□ 1.3
COPE-201ENST00000262812 CNOT7Q9UIV1 285 aaKnown RBP23.16■■□□□ 1.3
COPE-201ENST00000262812 SHTN1A0MZ66 631 aa23.15■■□□□ 1.3
COPE-201ENST00000262812 TXNRD3Q86VQ6 643 aa23.15■■□□□ 1.3
COPE-201ENST00000262812 TNNQ9UQP3 1299 aa23.15■■□□□ 1.3
COPE-201ENST00000262812 MYH3P11055 1940 aa23.14■■□□□ 1.3
COPE-201ENST00000262812 KLRK1P26718 216 aa23.14■■□□□ 1.29
COPE-201ENST00000262812 RABL6Q3YEC7 729 aaPredicted RBP23.14■■□□□ 1.29
COPE-201ENST00000262812 MAP1SQ66K74 1059 aaPredicted RBP23.14■■□□□ 1.29
COPE-201ENST00000262812 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.29
COPE-201ENST00000262812 PUS3Q9BZE2 481 aaKnown RBP23.14■■□□□ 1.29
COPE-201ENST00000262812 ADARB2Q9NS39 739 aaKnown RBP23.14■■□□□ 1.29
COPE-201ENST00000262812 LTBP1Q14766 1721 aa23.13■■□□□ 1.29
COPE-201ENST00000262812 UBTFL1P0CB47 393 aaPredicted RBP23.13■■□□□ 1.29
COPE-201ENST00000262812 USP50Q70EL3 339 aaPredicted RBP23.13■■□□□ 1.29
COPE-201ENST00000262812 CEP350Q5VT06 3117 aa23.13■■□□□ 1.29
COPE-201ENST00000262812 H7C1D1 291 aa23.12■■□□□ 1.29
COPE-201ENST00000262812 TRIM27P14373 513 aa23.12■■□□□ 1.29
COPE-201ENST00000262812 ATF7IPQ6VMQ6 1270 aa23.12■■□□□ 1.29
COPE-201ENST00000262812 PODNQ7Z5L7 613 aa23.12■■□□□ 1.29
COPE-201ENST00000262812 MICALL2Q8IY33 904 aa23.12■■□□□ 1.29
COPE-201ENST00000262812 CNTROBQ8N137 903 aa23.12■■□□□ 1.29
COPE-201ENST00000262812 FBXW7Q969H0 707 aa23.12■■□□□ 1.29
COPE-201ENST00000262812 MED23Q9ULK4 1368 aa23.12■■□□□ 1.29
COPE-201ENST00000262812 SCN4AP35499 1836 aa23.11■■□□□ 1.29
COPE-201ENST00000262812 VIL1P09327 827 aaKnown RBP23.11■■□□□ 1.29
COPE-201ENST00000262812 INTS3Q68E01 1043 aaKnown RBP23.11■■□□□ 1.29
COPE-201ENST00000262812 KLHDC4Q8TBB5 520 aa23.11■■□□□ 1.29
COPE-201ENST00000262812 DPF2Q92785 391 aa23.11■■□□□ 1.29
COPE-201ENST00000262812 USP17L3A6NCW0 530 aa23.1■■□□□ 1.29
COPE-201ENST00000262812 USP17L4A6NCW7 530 aa23.1■■□□□ 1.29
COPE-201ENST00000262812 RBM26Q5T8P6 1007 aaKnown RBP23.1■■□□□ 1.29
COPE-201ENST00000262812 USP17L1Q7RTZ2 530 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms