RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 CNNM1Q9NRU3 951 aa20.68■□□□□ 0.9
CHCHD3-201ENST00000262570 CACNA1SQ13698 1873 aa20.67■□□□□ 0.9
CHCHD3-201ENST00000262570 EYA2O00167 538 aa20.67■□□□□ 0.9
CHCHD3-201ENST00000262570 HMMRO75330 724 aa20.67■□□□□ 0.9
CHCHD3-201ENST00000262570 CCDC93Q567U6 631 aa20.67■□□□□ 0.9
CHCHD3-201ENST00000262570 SNED1Q8TER0 1413 aa20.66■□□□□ 0.9
CHCHD3-201ENST00000262570 GRIPAP1Q4V328 841 aa20.66■□□□□ 0.9
CHCHD3-201ENST00000262570 SIL1Q9H173 461 aa20.66■□□□□ 0.9
CHCHD3-201ENST00000262570 ARFGEF1Q9Y6D6 1849 aa20.65■□□□□ 0.9
CHCHD3-201ENST00000262570 CIAO1O76071 339 aa20.65■□□□□ 0.9
CHCHD3-201ENST00000262570 CHRNDQ07001 517 aa20.65■□□□□ 0.9
CHCHD3-201ENST00000262570 ATG9AQ7Z3C6 839 aa20.65■□□□□ 0.9
CHCHD3-201ENST00000262570 RTKN2Q8IZC4 609 aa20.65■□□□□ 0.9
CHCHD3-201ENST00000262570 NOP58Q9Y2X3 529 aaKnown RBP20.65■□□□□ 0.9
CHCHD3-201ENST00000262570 NEFLP07196 543 aa20.64■□□□□ 0.9
CHCHD3-201ENST00000262570 GPSM2P81274 684 aa20.64■□□□□ 0.9
CHCHD3-201ENST00000262570 PODXL2Q9NZ53 605 aa20.64■□□□□ 0.9
CHCHD3-201ENST00000262570 NSFL1CQ9UNZ2 370 aaKnown RBP20.64■□□□□ 0.9
CHCHD3-201ENST00000262570 LRRC37AA6NMS7 1700 aa20.64■□□□□ 0.89
CHCHD3-201ENST00000262570 MROH5Q6ZUA9 1318 aa20.64■□□□□ 0.89
CHCHD3-201ENST00000262570 SURF6O75683 361 aaKnown RBP20.63■□□□□ 0.89
CHCHD3-201ENST00000262570 MPNDQ8N594 471 aa20.63■□□□□ 0.89
CHCHD3-201ENST00000262570 ANKRD2Q9GZV1 360 aa20.63■□□□□ 0.89
CHCHD3-201ENST00000262570 GRIN3BO60391 1043 aa20.63■□□□□ 0.89
CHCHD3-201ENST00000262570 IL15P40933 162 aaPredicted RBP20.63■□□□□ 0.89
CHCHD3-201ENST00000262570 ANKIB1Q9P2G1 1089 aa20.63■□□□□ 0.89
CHCHD3-201ENST00000262570 XDHP47989 1333 aa20.62■□□□□ 0.89
CHCHD3-201ENST00000262570 G3BP1Q13283 466 aaKnown RBP eCLIP20.62■□□□□ 0.891e-7■■■□□ 15.2
CHCHD3-201ENST00000262570 DPP8Q6V1X1 898 aaPredicted RBP20.62■□□□□ 0.89
CHCHD3-201ENST00000262570 PSMD1Q99460 953 aa20.62■□□□□ 0.89
CHCHD3-201ENST00000262570 RTFDC1Q9BY42 306 aaPredicted RBP20.62■□□□□ 0.89
CHCHD3-201ENST00000262570 SPEF2Q9C093 1822 aa20.61■□□□□ 0.89
CHCHD3-201ENST00000262570 NFKBIEO00221 500 aa20.61■□□□□ 0.89
CHCHD3-201ENST00000262570 TAF5LO75529 589 aa20.61■□□□□ 0.89
CHCHD3-201ENST00000262570 METTL24Q5JXM2 366 aa20.61■□□□□ 0.89
CHCHD3-201ENST00000262570 ARHGAP27Q6ZUM4 889 aa20.61■□□□□ 0.89
CHCHD3-201ENST00000262570 VGLL2Q8N8G2 317 aa20.61■□□□□ 0.89
CHCHD3-201ENST00000262570 HELBQ8NG08 1087 aaPredicted RBP20.61■□□□□ 0.89
CHCHD3-201ENST00000262570 FKBP4Q02790 459 aaKnown RBP eCLIP20.6■□□□□ 0.89
CHCHD3-201ENST00000262570 HDAC1Q13547 482 aaPredicted RBP20.6■□□□□ 0.89
CHCHD3-201ENST00000262570 TBC1D16Q8TBP0 767 aa20.6■□□□□ 0.89
CHCHD3-201ENST00000262570 POLLQ9UGP5 575 aa20.6■□□□□ 0.89
CHCHD3-201ENST00000262570 EXOC6BQ9Y2D4 811 aa20.6■□□□□ 0.89
CHCHD3-201ENST00000262570 LTBP3Q9NS15 1303 aa20.6■□□□□ 0.89
CHCHD3-201ENST00000262570 PDE8BO95263 885 aa20.59■□□□□ 0.89
CHCHD3-201ENST00000262570 TAOK3Q9H2K8 898 aa20.59■□□□□ 0.89
CHCHD3-201ENST00000262570 DCTPP1Q9H773 170 aa20.59■□□□□ 0.89
CHCHD3-201ENST00000262570 GGA1Q9UJY5 639 aa20.59■□□□□ 0.89
CHCHD3-201ENST00000262570 LEMD3Q9Y2U8 911 aa20.59■□□□□ 0.89
CHCHD3-201ENST00000262570 WTIPA6NIX2 430 aaPredicted RBP20.59■□□□□ 0.89
CHCHD3-201ENST00000262570 SASH1O94885 1247 aa20.59■□□□□ 0.89
CHCHD3-201ENST00000262570 ATP2B4P23634 1241 aa20.59■□□□□ 0.89
CHCHD3-201ENST00000262570 HSP90AB4PQ58FF6 505 aa20.59■□□□□ 0.89
CHCHD3-201ENST00000262570 CEP126Q9P2H0 1117 aa20.59■□□□□ 0.89
CHCHD3-201ENST00000262570 DCAF8L1A6NGE4 600 aa20.58■□□□□ 0.88
CHCHD3-201ENST00000262570 OS9Q13438 667 aaPredicted RBP20.58■□□□□ 0.88
CHCHD3-201ENST00000262570 DUOX1Q9NRD9 1551 aa20.58■□□□□ 0.88
CHCHD3-201ENST00000262570 LTBP1Q14766 1721 aa20.58■□□□□ 0.88
CHCHD3-201ENST00000262570 FER1L6Q2WGJ9 1857 aa20.58■□□□□ 0.88
CHCHD3-201ENST00000262570 ZNF804BA4D1E1 1349 aa20.57■□□□□ 0.88
CHCHD3-201ENST00000262570 C6orf229H3BNL8 230 aa20.57■□□□□ 0.88
CHCHD3-201ENST00000262570 SNAP23O00161 211 aa20.57■□□□□ 0.88
CHCHD3-201ENST00000262570 UFL1O94874 794 aa20.57■□□□□ 0.88
CHCHD3-201ENST00000262570 RASSF7Q02833 373 aa20.57■□□□□ 0.88
CHCHD3-201ENST00000262570 SUPT20HQ8NEM7 779 aa20.57■□□□□ 0.88
CHCHD3-201ENST00000262570 RWDD1Q9H446 243 aaPredicted RBP20.57■□□□□ 0.88
CHCHD3-201ENST00000262570 TFCP2Q12800 502 aa20.56■□□□□ 0.88
CHCHD3-201ENST00000262570 UBE4AQ14139 1066 aa20.56■□□□□ 0.88
CHCHD3-201ENST00000262570 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.56■□□□□ 0.88
CHCHD3-201ENST00000262570 RAB11FIP3O75154 756 aa20.55■□□□□ 0.88
CHCHD3-201ENST00000262570 IGHDP01880 384 aa20.55■□□□□ 0.88
CHCHD3-201ENST00000262570 ERC1Q8IUD2 1116 aa20.55■□□□□ 0.88
CHCHD3-201ENST00000262570 VPS33BQ9H267 617 aa20.55■□□□□ 0.88
CHCHD3-201ENST00000262570 ZNF277Q9NRM2 450 aaPredicted RBP20.55■□□□□ 0.88
CHCHD3-201ENST00000262570 FGFR2P21802 821 aa20.55■□□□□ 0.88
CHCHD3-201ENST00000262570 KCNJ4P48050 445 aa20.55■□□□□ 0.88
CHCHD3-201ENST00000262570 PRELPP51888 382 aa20.55■□□□□ 0.88
CHCHD3-201ENST00000262570 PUM3Q15397 648 aaKnown RBP20.55■□□□□ 0.88
CHCHD3-201ENST00000262570 WASHC4Q2M389 1173 aa20.55■□□□□ 0.88
CHCHD3-201ENST00000262570 ERICH6BQ5W0A0 696 aa20.55■□□□□ 0.88
CHCHD3-201ENST00000262570 EYA3Q99504 573 aa20.55■□□□□ 0.88
CHCHD3-201ENST00000262570 RHPN1Q8TCX5 695 aa20.54■□□□□ 0.88
CHCHD3-201ENST00000262570 GPR101Q96P66 508 aaPredicted RBP20.54■□□□□ 0.88
CHCHD3-201ENST00000262570 LMNB1P20700 586 aa20.53■□□□□ 0.88
CHCHD3-201ENST00000262570 KIAA2012Q0VF49 1180 aa20.53■□□□□ 0.88
CHCHD3-201ENST00000262570 C15orf52Q6ZUT6 534 aaKnown RBP20.53■□□□□ 0.88
CHCHD3-201ENST00000262570 KIF1BPQ96EK5 621 aa20.53■□□□□ 0.88
CHCHD3-201ENST00000262570 ZC3H12CQ9C0D7 883 aaKnown RBP20.53■□□□□ 0.88
CHCHD3-201ENST00000262570 AKAP2Q9Y2D5 859 aa20.53■□□□□ 0.88
CHCHD3-201ENST00000262570 A0A1B0GUL6 1792 aa20.53■□□□□ 0.88
CHCHD3-201ENST00000262570 IRS2Q9Y4H2 1338 aa20.53■□□□□ 0.88
CHCHD3-201ENST00000262570 MED23Q9ULK4 1368 aa20.52■□□□□ 0.88
CHCHD3-201ENST00000262570 IARSP41252 1262 aaKnown RBP20.52■□□□□ 0.88
CHCHD3-201ENST00000262570 ATP2B3Q16720 1220 aa20.52■□□□□ 0.88
CHCHD3-201ENST00000262570 TXNRD3Q86VQ6 643 aa20.52■□□□□ 0.88
CHCHD3-201ENST00000262570 LPIN2Q92539 896 aa20.52■□□□□ 0.88
CHCHD3-201ENST00000262570 GCC1Q96CN9 775 aa20.52■□□□□ 0.88
CHCHD3-201ENST00000262570 GPR108Q9NPR9 543 aa20.52■□□□□ 0.88
CHCHD3-201ENST00000262570 APBB1O00213 710 aa20.51■□□□□ 0.87
CHCHD3-201ENST00000262570 PPIP5K2O43314 1243 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms