RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 DAB2P98082 770 aa7.62□□□□□ -1.19
CCDC54-201ENST00000261058 SRSF11Q05519 484 aaKnown RBP7.62□□□□□ -1.19
CCDC54-201ENST00000261058 MRPL58Q14197 206 aaKnown RBP7.62□□□□□ -1.19
CCDC54-201ENST00000261058 COL13A1Q5TAT6 717 aaPredicted RBP7.62□□□□□ -1.19
CCDC54-201ENST00000261058 PEAR1Q5VY43 1037 aaPredicted RBP7.62□□□□□ -1.19
CCDC54-201ENST00000261058 ZSCAN1Q8NBB4 408 aa7.62□□□□□ -1.19
CCDC54-201ENST00000261058 DUSP9Q99956 384 aaKnown RBP7.62□□□□□ -1.19
CCDC54-201ENST00000261058 KIAA1522Q9P206 1035 aaPredicted RBP7.62□□□□□ -1.19
CCDC54-201ENST00000261058 NSFL1CQ9UNZ2 370 aaKnown RBP7.62□□□□□ -1.19
CCDC54-201ENST00000261058 TMC4Q7Z404 712 aa7.61□□□□□ -1.19
CCDC54-201ENST00000261058 FCHSD1Q86WN1 690 aa7.61□□□□□ -1.19
CCDC54-201ENST00000261058 PARP2Q9UGN5 583 aa7.61□□□□□ -1.19
CCDC54-201ENST00000261058 PHF20L1A8MW92 1017 aa7.61□□□□□ -1.19
CCDC54-201ENST00000261058 SLURP2P0DP57 97 aa7.61□□□□□ -1.19
CCDC54-201ENST00000261058 EDN3P14138 238 aa7.61□□□□□ -1.19
CCDC54-201ENST00000261058 GNA15P30679 374 aa7.61□□□□□ -1.19
CCDC54-201ENST00000261058 PCBP4P57723 403 aaKnown RBP7.61□□□□□ -1.19
CCDC54-201ENST00000261058 KIAA0319Q5VV43 1072 aa7.61□□□□□ -1.19
CCDC54-201ENST00000261058 CEP120Q8N960 986 aa7.61□□□□□ -1.19
CCDC54-201ENST00000261058 FRMD6Q96NE9 622 aa7.61□□□□□ -1.19
CCDC54-201ENST00000261058 NPHS2Q9NP85 383 aa7.61□□□□□ -1.19
CCDC54-201ENST00000261058 RNF19AQ9NV58 838 aa7.61□□□□□ -1.19
CCDC54-201ENST00000261058 KANSL3Q9P2N6 904 aa7.61□□□□□ -1.19
CCDC54-201ENST00000261058 POLR3DP05423 398 aaPredicted RBP7.6□□□□□ -1.19
CCDC54-201ENST00000261058 IRS1P35568 1242 aa7.6□□□□□ -1.19
CCDC54-201ENST00000261058 RBM25P49756 843 aaKnown RBP7.6□□□□□ -1.19
CCDC54-201ENST00000261058 HYAL2Q12891 473 aa7.6□□□□□ -1.19
CCDC54-201ENST00000261058 PCSK7Q16549 785 aa7.6□□□□□ -1.19
CCDC54-201ENST00000261058 SLCO4C1Q6ZQN7 724 aa7.6□□□□□ -1.19
CCDC54-201ENST00000261058 NPM2Q86SE8 214 aaKnown RBP7.6□□□□□ -1.19
CCDC54-201ENST00000261058 EPS8L3Q8TE67 593 aaKnown RBP7.6□□□□□ -1.19
CCDC54-201ENST00000261058 DNAJB12Q9NXW2 375 aaKnown RBP7.6□□□□□ -1.19
CCDC54-201ENST00000261058 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.59□□□□□ -1.19
CCDC54-201ENST00000261058 PI16Q6UXB8 463 aa7.59□□□□□ -1.19
CCDC54-201ENST00000261058 GOLGA6L1Q8N7Z2 621 aa7.59□□□□□ -1.19
CCDC54-201ENST00000261058 MRRFQ96E11 262 aaKnown RBP7.59□□□□□ -1.19
CCDC54-201ENST00000261058 CNTNAP3BQ96NU0 1288 aa7.59□□□□□ -1.19
CCDC54-201ENST00000261058 CNTNAP3Q9BZ76 1288 aa7.59□□□□□ -1.19
CCDC54-201ENST00000261058 GDF2Q9UK05 429 aaPredicted RBP7.59□□□□□ -1.19
CCDC54-201ENST00000261058 LOC102724428A0A0B4J2F2 783 aa7.58□□□□□ -1.2
CCDC54-201ENST00000261058 A0A1W2PP55 124 aa7.58□□□□□ -1.2
CCDC54-201ENST00000261058 NFKBIEO00221 500 aa7.58□□□□□ -1.2
CCDC54-201ENST00000261058 GIPC1O14908 333 aa7.58□□□□□ -1.2
CCDC54-201ENST00000261058 SIK1P57059 783 aa7.58□□□□□ -1.2
CCDC54-201ENST00000261058 ACDQ96AP0 544 aa7.58□□□□□ -1.2
CCDC54-201ENST00000261058 NSUN5Q96P11 429 aaKnown RBP7.58□□□□□ -1.2
CCDC54-201ENST00000261058 OXCT2Q9BYC2 517 aaPredicted RBP7.58□□□□□ -1.2
CCDC54-201ENST00000261058 LATS2Q9NRM7 1088 aa7.58□□□□□ -1.2
CCDC54-201ENST00000261058 LRRC4BQ9NT99 713 aa7.58□□□□□ -1.2
CCDC54-201ENST00000261058 GGA1Q9UJY5 639 aa7.58□□□□□ -1.2
CCDC54-201ENST00000261058 NAGPAQ9UK23 515 aa7.58□□□□□ -1.2
CCDC54-201ENST00000261058 SLC6A14Q9UN76 642 aa7.58□□□□□ -1.2
CCDC54-201ENST00000261058 NEURL1BA8MQ27 555 aa7.57□□□□□ -1.2
CCDC54-201ENST00000261058 ADAMTS2O95450 1211 aa7.57□□□□□ -1.2
CCDC54-201ENST00000261058 ADH7P40394 386 aa7.57□□□□□ -1.2
CCDC54-201ENST00000261058 LDLRAD1Q5T700 205 aa7.57□□□□□ -1.2
CCDC54-201ENST00000261058 GLIS3Q8NEA6 775 aa7.57□□□□□ -1.2
CCDC54-201ENST00000261058 OSBPL7Q9BZF2 842 aa7.57□□□□□ -1.2
CCDC54-201ENST00000261058 UBE2OQ9C0C9 1292 aaKnown RBP7.57□□□□□ -1.2
CCDC54-201ENST00000261058 SUV39H2Q9H5I1 410 aa7.57□□□□□ -1.2
CCDC54-201ENST00000261058 DZANK1Q9NVP4 752 aa7.57□□□□□ -1.2
CCDC54-201ENST00000261058 AK5Q9Y6K8 562 aa7.57□□□□□ -1.2
CCDC54-201ENST00000261058 ELOA3CA0A087WX78 387 aaPredicted RBP7.56□□□□□ -1.2
CCDC54-201ENST00000261058 ELOA3DA6NLF2 546 aaPredicted RBP7.56□□□□□ -1.2
CCDC54-201ENST00000261058 EPXP11678 715 aa7.56□□□□□ -1.2
CCDC54-201ENST00000261058 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
CCDC54-201ENST00000261058 XPCQ01831 940 aaPredicted RBP7.56□□□□□ -1.2
CCDC54-201ENST00000261058 GRM2Q14416 872 aa7.56□□□□□ -1.2
CCDC54-201ENST00000261058 ELOA3BQ3SY89 546 aa7.56□□□□□ -1.2
CCDC54-201ENST00000261058 PRPF40BQ6NWY9 871 aaKnown RBP7.56□□□□□ -1.2
CCDC54-201ENST00000261058 C1orf229Q6ZS94 237 aaPredicted RBP7.56□□□□□ -1.2
CCDC54-201ENST00000261058 NCAPG2Q86XI2 1143 aa7.56□□□□□ -1.2
CCDC54-201ENST00000261058 ELOA3Q8NG57 546 aa7.56□□□□□ -1.2
CCDC54-201ENST00000261058 FAM161BQ96MY7 647 aa7.56□□□□□ -1.2
CCDC54-201ENST00000261058 ZKSCAN3Q9BRR0 538 aa7.56□□□□□ -1.2
CCDC54-201ENST00000261058 SRCIN1Q9C0H9 1055 aa7.56□□□□□ -1.2
CCDC54-201ENST00000261058 IGSF5Q9NSI5 407 aa7.56□□□□□ -1.2
CCDC54-201ENST00000261058 NLRP2Q9NX02 1062 aa7.56□□□□□ -1.2
CCDC54-201ENST00000261058 SPG7Q9UQ90 795 aa7.56□□□□□ -1.2
CCDC54-201ENST00000261058 RECKO95980 971 aa7.55□□□□□ -1.2
CCDC54-201ENST00000261058 ACPPP15309 386 aa7.55□□□□□ -1.2
CCDC54-201ENST00000261058 TCF12Q99081 682 aa7.55□□□□□ -1.2
CCDC54-201ENST00000261058 BHLHE41Q9C0J9 482 aaPredicted RBP7.55□□□□□ -1.2
CCDC54-201ENST00000261058 C12orf49Q9H741 205 aa7.55□□□□□ -1.2
CCDC54-201ENST00000261058 FRRS1LQ9P0K9 344 aa7.55□□□□□ -1.2
CCDC54-201ENST00000261058 E9PSI1 815 aa7.54□□□□□ -1.2
CCDC54-201ENST00000261058 J3QW42 95 aa7.54□□□□□ -1.2
CCDC54-201ENST00000261058 SORBS3O60504 671 aa7.54□□□□□ -1.2
CCDC54-201ENST00000261058 MLLT1Q03111 559 aaPredicted RBP7.54□□□□□ -1.2
CCDC54-201ENST00000261058 PSMD2Q13200 908 aa7.54□□□□□ -1.2
CCDC54-201ENST00000261058 CCNJLQ8IV13 435 aa7.54□□□□□ -1.2
CCDC54-201ENST00000261058 TMEM102Q8N9M5 508 aaPredicted RBP7.54□□□□□ -1.2
CCDC54-201ENST00000261058 TTC9Q92623 222 aa7.54□□□□□ -1.2
CCDC54-201ENST00000261058 OSMRQ99650 979 aa7.54□□□□□ -1.2
CCDC54-201ENST00000261058 LPIN3Q9BQK8 851 aa7.54□□□□□ -1.2
CCDC54-201ENST00000261058 PBX4Q9BYU1 374 aa7.54□□□□□ -1.2
CCDC54-201ENST00000261058 BCO2Q9BYV7 579 aa7.54□□□□□ -1.2
CCDC54-201ENST00000261058 CTSHP09668 335 aa7.53□□□□□ -1.2
CCDC54-201ENST00000261058 ITGAEP38570 1179 aa7.53□□□□□ -1.2
CCDC54-201ENST00000261058 PERM1Q5SV97 790 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms