RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 PTPN12Q05209 780 aaKnown RBP25.69■■□□□ 1.7
RTCA-201ENST00000260563 CCDC93Q567U6 631 aa25.69■■□□□ 1.7
RTCA-201ENST00000260563 LDHAL6AQ6ZMR3 332 aa25.69■■□□□ 1.7
RTCA-201ENST00000260563 SIRT2Q8IXJ6 389 aa25.69■■□□□ 1.7
RTCA-201ENST00000260563 SSH3Q8TE77 659 aa25.69■■□□□ 1.7
RTCA-201ENST00000260563 C7orf43Q8WVR3 580 aa25.69■■□□□ 1.7
RTCA-201ENST00000260563 CNNM1Q9NRU3 951 aa25.69■■□□□ 1.7
RTCA-201ENST00000260563 KDM2BQ8NHM5 1336 aa25.69■■□□□ 1.7
RTCA-201ENST00000260563 POLA2Q14181 598 aa25.68■■□□□ 1.7
RTCA-201ENST00000260563 CC2D2BQ6DHV5 1058 aa25.68■■□□□ 1.7
RTCA-201ENST00000260563 OLFM4Q6UX06 510 aa25.68■■□□□ 1.7
RTCA-201ENST00000260563 SLC51AQ86UW1 340 aa25.68■■□□□ 1.7
RTCA-201ENST00000260563 CCDC88AQ3V6T2 1871 aa25.68■■□□□ 1.7
RTCA-201ENST00000260563 HMMRO75330 724 aa25.68■■□□□ 1.7
RTCA-201ENST00000260563 CENPQQ7L2Z9 268 aaPredicted RBP25.68■■□□□ 1.7
RTCA-201ENST00000260563 COPRSQ9NQ92 184 aa25.68■■□□□ 1.7
RTCA-201ENST00000260563 PA2G4Q9UQ80 394 aaKnown RBP25.68■■□□□ 1.7
RTCA-201ENST00000260563 SIL1Q9H173 461 aa25.67■■□□□ 1.7
RTCA-201ENST00000260563 SNED1Q8TER0 1413 aa25.67■■□□□ 1.7
RTCA-201ENST00000260563 DUOX1Q9NRD9 1551 aa25.66■■□□□ 1.7
RTCA-201ENST00000260563 GRIPAP1Q4V328 841 aa25.65■■□□□ 1.7
RTCA-201ENST00000260563 PUS3Q9BZE2 481 aaKnown RBP25.65■■□□□ 1.7
RTCA-201ENST00000260563 FBXO3Q9UK99 471 aa25.65■■□□□ 1.7
RTCA-201ENST00000260563 MINPP1Q9UNW1 487 aa25.65■■□□□ 1.7
RTCA-201ENST00000260563 SBF1O95248 1867 aa25.65■■□□□ 1.7
RTCA-201ENST00000260563 DCAF8L1A6NGE4 600 aa25.64■■□□□ 1.7
RTCA-201ENST00000260563 EYA2O00167 538 aa25.64■■□□□ 1.7
RTCA-201ENST00000260563 LRRC24Q50LG9 513 aa25.64■■□□□ 1.7
RTCA-201ENST00000260563 RTKN2Q8IZC4 609 aa25.64■■□□□ 1.7
RTCA-201ENST00000260563 CHRNDQ07001 517 aa25.63■■□□□ 1.69
RTCA-201ENST00000260563 ANKIB1Q9P2G1 1089 aa25.63■■□□□ 1.69
RTCA-201ENST00000260563 XDHP47989 1333 aa25.63■■□□□ 1.69
RTCA-201ENST00000260563 MROH5Q6ZUA9 1318 aa25.63■■□□□ 1.69
RTCA-201ENST00000260563 GRIN3BO60391 1043 aa25.63■■□□□ 1.69
RTCA-201ENST00000260563 CIAO1O76071 339 aa25.63■■□□□ 1.69
RTCA-201ENST00000260563 DPP8Q6V1X1 898 aaPredicted RBP25.63■■□□□ 1.69
RTCA-201ENST00000260563 MPNDQ8N594 471 aa25.63■■□□□ 1.69
RTCA-201ENST00000260563 NSFL1CQ9UNZ2 370 aaKnown RBP25.63■■□□□ 1.69
RTCA-201ENST00000260563 GPSM2P81274 684 aa25.62■■□□□ 1.69
RTCA-201ENST00000260563 ANKRD2Q9GZV1 360 aa25.62■■□□□ 1.69
RTCA-201ENST00000260563 RIPOR2Q9Y4F9 1068 aa25.62■■□□□ 1.69
RTCA-201ENST00000260563 DICER1Q9UPY3 1922 aaKnown RBP25.62■■□□□ 1.69
RTCA-201ENST00000260563 SURF6O75683 361 aaKnown RBP25.6■■□□□ 1.69
RTCA-201ENST00000260563 IL15P40933 162 aaPredicted RBP25.6■■□□□ 1.69
RTCA-201ENST00000260563 G3BP1Q13283 466 aaKnown RBP eCLIP25.6■■□□□ 1.69
RTCA-201ENST00000260563 METTL24Q5JXM2 366 aa25.6■■□□□ 1.69
RTCA-201ENST00000260563 ARHGAP27Q6ZUM4 889 aa25.6■■□□□ 1.69
RTCA-201ENST00000260563 ATG9AQ7Z3C6 839 aa25.6■■□□□ 1.69
RTCA-201ENST00000260563 TAOK3Q9H2K8 898 aa25.6■■□□□ 1.69
RTCA-201ENST00000260563 PODXL2Q9NZ53 605 aa25.6■■□□□ 1.69
RTCA-201ENST00000260563 FKBP4Q02790 459 aaKnown RBP eCLIP25.59■■□□□ 1.69
RTCA-201ENST00000260563 OS9Q13438 667 aaPredicted RBP25.59■■□□□ 1.69
RTCA-201ENST00000260563 PSMD1Q99460 953 aa25.59■■□□□ 1.69
RTCA-201ENST00000260563 ARAP2Q8WZ64 1704 aa25.59■■□□□ 1.69
RTCA-201ENST00000260563 NFKBIEO00221 500 aa25.58■■□□□ 1.69
RTCA-201ENST00000260563 GCC1Q96CN9 775 aa25.58■■□□□ 1.69
RTCA-201ENST00000260563 GGA1Q9UJY5 639 aa25.58■■□□□ 1.69
RTCA-201ENST00000260563 NOP58Q9Y2X3 529 aaKnown RBP25.58■■□□□ 1.69
RTCA-201ENST00000260563 TIAM2Q8IVF5 1701 aa25.58■■□□□ 1.69
RTCA-201ENST00000260563 LTBP3Q9NS15 1303 aa25.58■■□□□ 1.68
RTCA-201ENST00000260563 UFL1O94874 794 aa25.58■■□□□ 1.68
RTCA-201ENST00000260563 RASSF7Q02833 373 aa25.58■■□□□ 1.68
RTCA-201ENST00000260563 SMC5Q8IY18 1101 aa25.58■■□□□ 1.68
RTCA-201ENST00000260563 SUPT20HQ8NEM7 779 aa25.58■■□□□ 1.68
RTCA-201ENST00000260563 HELBQ8NG08 1087 aaPredicted RBP25.58■■□□□ 1.68
RTCA-201ENST00000260563 DCTPP1Q9H773 170 aa25.58■■□□□ 1.68
RTCA-201ENST00000260563 CHD4Q14839 1912 aa25.57■■□□□ 1.68
RTCA-201ENST00000260563 TAF5LO75529 589 aa25.57■■□□□ 1.68
RTCA-201ENST00000260563 KCNJ4P48050 445 aa25.57■■□□□ 1.68
RTCA-201ENST00000260563 RTFDC1Q9BY42 306 aaPredicted RBP25.57■■□□□ 1.68
RTCA-201ENST00000260563 EXOC6BQ9Y2D4 811 aa25.57■■□□□ 1.68
RTCA-201ENST00000260563 ATP2B4P23634 1241 aa25.56■■□□□ 1.68
RTCA-201ENST00000260563 HSP90AB4PQ58FF6 505 aa25.56■■□□□ 1.68
RTCA-201ENST00000260563 TBC1D16Q8TBP0 767 aa25.56■■□□□ 1.68
RTCA-201ENST00000260563 LEMD3Q9Y2U8 911 aa25.56■■□□□ 1.68
RTCA-201ENST00000260563 C6orf229H3BNL8 230 aa25.55■■□□□ 1.68
RTCA-201ENST00000260563 VGLL2Q8N8G2 317 aa25.55■■□□□ 1.68
RTCA-201ENST00000260563 CEP126Q9P2H0 1117 aa25.55■■□□□ 1.68
RTCA-201ENST00000260563 POLLQ9UGP5 575 aa25.55■■□□□ 1.68
RTCA-201ENST00000260563 ZNF804BA4D1E1 1349 aa25.54■■□□□ 1.68
RTCA-201ENST00000260563 PDE8BO95263 885 aa25.54■■□□□ 1.68
RTCA-201ENST00000260563 ERC1Q8IUD2 1116 aa25.53■■□□□ 1.68
RTCA-201ENST00000260563 EYA3Q99504 573 aa25.53■■□□□ 1.68
RTCA-201ENST00000260563 ZNF277Q9NRM2 450 aaPredicted RBP25.53■■□□□ 1.68
RTCA-201ENST00000260563 MYH13Q9UKX3 1938 aa25.52■■□□□ 1.68
RTCA-201ENST00000260563 MED23Q9ULK4 1368 aa25.52■■□□□ 1.68
RTCA-201ENST00000260563 TFCP2Q12800 502 aa25.52■■□□□ 1.68
RTCA-201ENST00000260563 PUM3Q15397 648 aaKnown RBP25.52■■□□□ 1.68
RTCA-201ENST00000260563 SASH1O94885 1247 aa25.51■■□□□ 1.67
RTCA-201ENST00000260563 IARSP41252 1262 aaKnown RBP25.51■■□□□ 1.67
RTCA-201ENST00000260563 UBE4AQ14139 1066 aa25.51■■□□□ 1.67
RTCA-201ENST00000260563 GPR101Q96P66 508 aaPredicted RBP25.51■■□□□ 1.67
RTCA-201ENST00000260563 ZNF609O15014 1411 aa25.5■■□□□ 1.67
RTCA-201ENST00000260563 PPIP5K2O43314 1243 aa25.5■■□□□ 1.67
RTCA-201ENST00000260563 RAB11FIP3O75154 756 aa25.5■■□□□ 1.67
RTCA-201ENST00000260563 WASHC4Q2M389 1173 aa25.5■■□□□ 1.67
RTCA-201ENST00000260563 SNAP23O00161 211 aa25.49■■□□□ 1.67
RTCA-201ENST00000260563 APBB1O00213 710 aa25.49■■□□□ 1.67
RTCA-201ENST00000260563 LMNB1P20700 586 aa25.49■■□□□ 1.67
RTCA-201ENST00000260563 AOC3Q16853 763 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms