RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 DDX46Q7L014 1031 aaKnown RBP21.47■■□□□ 1.03
SRSF1-201ENST00000258962 PDE1AP54750 535 aa21.46■■□□□ 1.03
SRSF1-201ENST00000258962 TMX4Q9H1E5 349 aaPredicted RBP21.46■■□□□ 1.03
SRSF1-201ENST00000258962 SLX4Q8IY92 1834 aa21.46■■□□□ 1.03
SRSF1-201ENST00000258962 CCDC93Q567U6 631 aa21.45■■□□□ 1.02
SRSF1-201ENST00000258962 LMBR1LQ6UX01 489 aa21.45■■□□□ 1.02
SRSF1-201ENST00000258962 C7orf43Q8WVR3 580 aa21.45■■□□□ 1.02
SRSF1-201ENST00000258962 OS9Q13438 667 aaPredicted RBP21.45■■□□□ 1.02
SRSF1-201ENST00000258962 SF3B3Q15393 1217 aaKnown RBP21.45■■□□□ 1.02
SRSF1-201ENST00000258962 C9orf131Q5VYM1 1079 aa21.45■■□□□ 1.02
SRSF1-201ENST00000258962 KLHDC4Q8TBB5 520 aa21.45■■□□□ 1.02
SRSF1-201ENST00000258962 PDE8AO60658 829 aa21.44■■□□□ 1.02
SRSF1-201ENST00000258962 BBOX1O75936 387 aa21.44■■□□□ 1.02
SRSF1-201ENST00000258962 MX1P20591 662 aa21.44■■□□□ 1.02
SRSF1-201ENST00000258962 PTPN12Q05209 780 aaKnown RBP21.44■■□□□ 1.02
SRSF1-201ENST00000258962 CC2D2BQ6DHV5 1058 aa21.44■■□□□ 1.02
SRSF1-201ENST00000258962 ERC1Q8IUD2 1116 aa21.44■■□□□ 1.02
SRSF1-201ENST00000258962 RTKN2Q8IZC4 609 aa21.44■■□□□ 1.02
SRSF1-201ENST00000258962 COPRSQ9NQ92 184 aa21.44■■□□□ 1.02
SRSF1-201ENST00000258962 STAP2Q9UGK3 403 aa21.44■■□□□ 1.02
SRSF1-201ENST00000258962 PPEF1O14829 653 aaPredicted RBP21.43■■□□□ 1.02
SRSF1-201ENST00000258962 SASH1O94885 1247 aa21.43■■□□□ 1.02
SRSF1-201ENST00000258962 LMNB1P20700 586 aa21.43■■□□□ 1.02
SRSF1-201ENST00000258962 RASSF7Q02833 373 aa21.43■■□□□ 1.02
SRSF1-201ENST00000258962 TAOK3Q9H2K8 898 aa21.43■■□□□ 1.02
SRSF1-201ENST00000258962 RNF181Q9P0P0 153 aa21.43■■□□□ 1.02
SRSF1-201ENST00000258962 CDHR2Q9BYE9 1310 aa21.42■■□□□ 1.02
SRSF1-201ENST00000258962 LAMB2P55268 1798 aa21.42■■□□□ 1.02
SRSF1-201ENST00000258962 NFKBIEO00221 500 aa21.42■■□□□ 1.02
SRSF1-201ENST00000258962 TSHZ3Q63HK5 1081 aa21.42■■□□□ 1.02
SRSF1-201ENST00000258962 PLA2G12BQ9BX93 195 aa21.42■■□□□ 1.02
SRSF1-201ENST00000258962 SIL1Q9H173 461 aa21.42■■□□□ 1.02
SRSF1-201ENST00000258962 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.42■■□□□ 1.02
SRSF1-201ENST00000258962 G3BP1Q13283 466 aaKnown RBP eCLIP21.41■■□□□ 1.02
SRSF1-201ENST00000258962 CCDC152Q4G0S7 254 aa21.41■■□□□ 1.02
SRSF1-201ENST00000258962 GRIPAP1Q4V328 841 aa21.41■■□□□ 1.02
SRSF1-201ENST00000258962 CACNA1SQ13698 1873 aa21.41■■□□□ 1.02
SRSF1-201ENST00000258962 AOX1Q06278 1338 aa21.41■■□□□ 1.02
SRSF1-201ENST00000258962 DDX60Q8IY21 1712 aaKnown RBP21.41■■□□□ 1.02
SRSF1-201ENST00000258962 GRAPQ13588 217 aa21.4■■□□□ 1.02
SRSF1-201ENST00000258962 OLFM4Q6UX06 510 aa21.4■■□□□ 1.02
SRSF1-201ENST00000258962 ZNF784Q8NCA9 323 aaPredicted RBP21.4■■□□□ 1.02
SRSF1-201ENST00000258962 GRAPLQ8TC17 118 aaPredicted RBP21.4■■□□□ 1.02
SRSF1-201ENST00000258962 AK9Q5TCS8 1911 aa21.4■■□□□ 1.02
SRSF1-201ENST00000258962 LTBP3Q9NS15 1303 aa21.39■■□□□ 1.02
SRSF1-201ENST00000258962 SDSP20132 328 aa21.39■■□□□ 1.01
SRSF1-201ENST00000258962 TMC4Q7Z404 712 aa21.39■■□□□ 1.01
SRSF1-201ENST00000258962 ATP6V0A2Q9Y487 856 aa21.39■■□□□ 1.01
SRSF1-201ENST00000258962 ANP32AP39687 249 aaKnown RBP21.38■■□□□ 1.01
SRSF1-201ENST00000258962 FKBP4Q02790 459 aaKnown RBP eCLIP21.38■■□□□ 1.01
SRSF1-201ENST00000258962 TBC1D9Q6ZT07 1266 aa21.38■■□□□ 1.01
SRSF1-201ENST00000258962 CLASRPQ8N2M8 674 aaKnown RBP21.38■■□□□ 1.01
SRSF1-201ENST00000258962 CHMP3Q9Y3E7 222 aa21.38■■□□□ 1.01
SRSF1-201ENST00000258962 CDC45O75419 566 aa21.37■■□□□ 1.01
SRSF1-201ENST00000258962 CSF1RP07333 972 aa21.37■■□□□ 1.01
SRSF1-201ENST00000258962 CTSWP56202 376 aa21.37■■□□□ 1.01
SRSF1-201ENST00000258962 SP8Q8IXZ3 490 aa21.37■■□□□ 1.01
SRSF1-201ENST00000258962 CCDC85AQ96PX6 553 aaPredicted RBP21.37■■□□□ 1.01
SRSF1-201ENST00000258962 RPS8P62241 208 aaKnown RBP21.36■■□□□ 1.01
SRSF1-201ENST00000258962 PI4K2BQ8TCG2 481 aa21.36■■□□□ 1.01
SRSF1-201ENST00000258962 TTLL11Q8NHH1 800 aa21.35■■□□□ 1.01
SRSF1-201ENST00000258962 CELF1Q92879 486 aaKnown RBP21.35■■□□□ 1.01
SRSF1-201ENST00000258962 PRELPP51888 382 aa21.34■■□□□ 1.01
SRSF1-201ENST00000258962 ZNF526Q8TF50 670 aaPredicted RBP21.34■■□□□ 1.01
SRSF1-201ENST00000258962 EAF2Q96CJ1 260 aaPredicted RBP21.34■■□□□ 1.01
SRSF1-201ENST00000258962 PSMD1Q99460 953 aa21.34■■□□□ 1.01
SRSF1-201ENST00000258962 SEC31BQ9NQW1 1179 aa21.34■■□□□ 1.01
SRSF1-201ENST00000258962 FER1L6Q2WGJ9 1857 aa21.34■■□□□ 1.01
SRSF1-201ENST00000258962 MFAP1P55081 439 aaKnown RBP21.34■■□□□ 1.01
SRSF1-201ENST00000258962 ATG9AQ7Z3C6 839 aa21.34■■□□□ 1.01
SRSF1-201ENST00000258962 AACSQ86V21 672 aa21.34■■□□□ 1.01
SRSF1-201ENST00000258962 ZNF277Q9NRM2 450 aaPredicted RBP21.34■■□□□ 1.01
SRSF1-201ENST00000258962 SBF1O95248 1867 aa21.33■■□□□ 1.01
SRSF1-201ENST00000258962 TFCP2Q12800 502 aa21.33■■□□□ 1
SRSF1-201ENST00000258962 MPNDQ8N594 471 aa21.33■■□□□ 1
SRSF1-201ENST00000258962 ZNF594Q96JF6 807 aaPredicted RBP21.33■■□□□ 1
SRSF1-201ENST00000258962 CDC5LQ99459 802 aaKnown RBP21.33■■□□□ 1
SRSF1-201ENST00000258962 GPBP1L1Q9HC44 474 aaPredicted RBP21.33■■□□□ 1
SRSF1-201ENST00000258962 TTC41PQ6P2S7 1318 aa21.33■■□□□ 1
SRSF1-201ENST00000258962 ZC3H4Q9UPT8 1303 aaKnown RBP21.33■■□□□ 1
SRSF1-201ENST00000258962 IFIT2P09913 472 aaKnown RBP21.32■■□□□ 1
SRSF1-201ENST00000258962 DPP8Q6V1X1 898 aaPredicted RBP21.32■■□□□ 1
SRSF1-201ENST00000258962 ANKRD18AQ8IVF6 992 aa21.32■■□□□ 1
SRSF1-201ENST00000258962 TBC1D32Q96NH3 1257 aa21.32■■□□□ 1
SRSF1-201ENST00000258962 TLR7Q9NYK1 1049 aaKnown RBP21.32■■□□□ 1
SRSF1-201ENST00000258962 SUPT20HQ8NEM7 779 aa21.31■■□□□ 1
SRSF1-201ENST00000258962 GREM2Q9H772 168 aa21.31■■□□□ 1
SRSF1-201ENST00000258962 UPF2Q9HAU5 1272 aaKnown RBP21.31■■□□□ 1
SRSF1-201ENST00000258962 EYA2O00167 538 aa21.3■■□□□ 1
SRSF1-201ENST00000258962 CIAO1O76071 339 aa21.3■■□□□ 1
SRSF1-201ENST00000258962 IARSP41252 1262 aaKnown RBP21.3■■□□□ 1
SRSF1-201ENST00000258962 CCDC57Q2TAC2 916 aa21.3■■□□□ 1
SRSF1-201ENST00000258962 LRRC24Q50LG9 513 aa21.3■■□□□ 1
SRSF1-201ENST00000258962 CCDC8Q9H0W5 538 aaPredicted RBP21.3■■□□□ 1
SRSF1-201ENST00000258962 TNNI3KQ59H18 835 aa21.29■■□□□ 1
SRSF1-201ENST00000258962 DPY19L2Q6NUT2 758 aa21.29■■□□□ 1
SRSF1-201ENST00000258962 SLC51AQ86UW1 340 aa21.29■■□□□ 1
SRSF1-201ENST00000258962 PUS3Q9BZE2 481 aaKnown RBP21.29■■□□□ 1
SRSF1-201ENST00000258962 ECHDC1Q9NTX5 307 aa21.29■■□□□ 1
SRSF1-201ENST00000258962 NSFL1CQ9UNZ2 370 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms