RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 WTIPA6NIX2 430 aaPredicted RBP15.97■□□□□ 0.15
LSM5-201ENST00000223084 FZD9O00144 591 aa15.97■□□□□ 0.15
LSM5-201ENST00000223084 RIMBP2O15034 1052 aa15.97■□□□□ 0.15
LSM5-201ENST00000223084 IFIT5Q13325 482 aaKnown RBP15.97■□□□□ 0.15
LSM5-201ENST00000223084 DPY19L2Q6NUT2 758 aa15.97■□□□□ 0.15
LSM5-201ENST00000223084 ATF7IPQ6VMQ6 1270 aa15.97■□□□□ 0.15
LSM5-201ENST00000223084 NIM1KQ8IY84 436 aa15.97■□□□□ 0.15
LSM5-201ENST00000223084 ANKRD44Q8N8A2 993 aa15.97■□□□□ 0.15
LSM5-201ENST00000223084 TBC1D16Q8TBP0 767 aa15.97■□□□□ 0.15
LSM5-201ENST00000223084 ZNF594Q96JF6 807 aaPredicted RBP15.97■□□□□ 0.15
LSM5-201ENST00000223084 YTHDC1Q96MU7 727 aaKnown RBP15.97■□□□□ 0.15
LSM5-201ENST00000223084 MINPP1Q9UNW1 487 aa15.97■□□□□ 0.15
LSM5-201ENST00000223084 LTBP1Q14766 1721 aa15.97■□□□□ 0.15
LSM5-201ENST00000223084 UFL1O94874 794 aa15.96■□□□□ 0.15
LSM5-201ENST00000223084 KIAA2012Q0VF49 1180 aa15.96■□□□□ 0.15
LSM5-201ENST00000223084 ZKSCAN2Q63HK3 967 aa15.96■□□□□ 0.15
LSM5-201ENST00000223084 INTS3Q68E01 1043 aaKnown RBP15.96■□□□□ 0.15
LSM5-201ENST00000223084 MPHOSPH8Q99549 860 aa15.96■□□□□ 0.15
LSM5-201ENST00000223084 VPS33BQ9H267 617 aa15.96■□□□□ 0.15
LSM5-201ENST00000223084 PODXL2Q9NZ53 605 aa15.96■□□□□ 0.15
LSM5-201ENST00000223084 WASHC4Q2M389 1173 aa15.95■□□□□ 0.14
LSM5-201ENST00000223084 CCDC57Q2TAC2 916 aa15.95■□□□□ 0.14
LSM5-201ENST00000223084 GGA1Q9UJY5 639 aa15.95■□□□□ 0.14
LSM5-201ENST00000223084 XDHP47989 1333 aa15.94■□□□□ 0.14
LSM5-201ENST00000223084 POTECB2RU33 542 aa15.94■□□□□ 0.14
LSM5-201ENST00000223084 UBTFL1P0CB47 393 aaPredicted RBP15.94■□□□□ 0.14
LSM5-201ENST00000223084 EIF6P56537 245 aaKnown RBP15.94■□□□□ 0.14
LSM5-201ENST00000223084 RABL6Q3YEC7 729 aaPredicted RBP15.94■□□□□ 0.14
LSM5-201ENST00000223084 TAF7LQ5H9L4 462 aa15.94■□□□□ 0.14
LSM5-201ENST00000223084 MEIS3Q99687 375 aa15.94■□□□□ 0.14
LSM5-201ENST00000223084 ATP2B4P23634 1241 aa15.93■□□□□ 0.14
LSM5-201ENST00000223084 DOK7Q18PE1 504 aa15.93■□□□□ 0.14
LSM5-201ENST00000223084 TMEM57Q8N5G2 664 aa15.93■□□□□ 0.14
LSM5-201ENST00000223084 HELBQ8NG08 1087 aaPredicted RBP15.93■□□□□ 0.14
LSM5-201ENST00000223084 EYA3Q99504 573 aa15.93■□□□□ 0.14
LSM5-201ENST00000223084 DBNDD1Q9H9R9 158 aa15.93■□□□□ 0.14
LSM5-201ENST00000223084 ZNRF3Q9ULT6 936 aa15.93■□□□□ 0.14
LSM5-201ENST00000223084 GJA3Q9Y6H8 435 aa15.93■□□□□ 0.14
LSM5-201ENST00000223084 WDR90Q96KV7 1748 aa15.92■□□□□ 0.14
LSM5-201ENST00000223084 YDJCA8MPS7 323 aa15.92■□□□□ 0.14
LSM5-201ENST00000223084 RLBP1P12271 317 aa15.92■□□□□ 0.14
LSM5-201ENST00000223084 CHRNDQ07001 517 aa15.92■□□□□ 0.14
LSM5-201ENST00000223084 CXCL9Q07325 125 aa15.92■□□□□ 0.14
LSM5-201ENST00000223084 PUS3Q9BZE2 481 aaKnown RBP15.92■□□□□ 0.14
LSM5-201ENST00000223084 LRRFIP2Q9Y608 721 aaKnown RBP15.92■□□□□ 0.14
LSM5-201ENST00000223084 SNAP23O00161 211 aa15.91■□□□□ 0.14
LSM5-201ENST00000223084 TAF5LO75529 589 aa15.91■□□□□ 0.14
LSM5-201ENST00000223084 RAD17O75943 681 aa15.91■□□□□ 0.14
LSM5-201ENST00000223084 VEGFAP15692 232 aaPredicted RBP15.91■□□□□ 0.14
LSM5-201ENST00000223084 LDHAL6AQ6ZMR3 332 aa15.91■□□□□ 0.14
LSM5-201ENST00000223084 KLHDC4Q8TBB5 520 aa15.91■□□□□ 0.14
LSM5-201ENST00000223084 ZC3H12CQ9C0D7 883 aaKnown RBP15.91■□□□□ 0.14
LSM5-201ENST00000223084 RCAN3Q9UKA8 241 aa15.91■□□□□ 0.14
LSM5-201ENST00000223084 PLIN1O60240 522 aa15.9■□□□□ 0.14
LSM5-201ENST00000223084 ECE2O60344 883 aa15.9■□□□□ 0.14
LSM5-201ENST00000223084 FTSJ3Q8IY81 847 aaKnown RBP15.9■□□□□ 0.14
LSM5-201ENST00000223084 DZIP1LQ8IYY4 767 aaKnown RBP15.9■□□□□ 0.14
LSM5-201ENST00000223084 GPC2Q8N158 579 aa15.9■□□□□ 0.14
LSM5-201ENST00000223084 L3MBTL3Q96JM7 780 aaPredicted RBP15.9■□□□□ 0.14
LSM5-201ENST00000223084 ANKRD2Q9GZV1 360 aa15.9■□□□□ 0.14
LSM5-201ENST00000223084 KCNQ5Q9NR82 932 aa15.9■□□□□ 0.14
LSM5-201ENST00000223084 CNNM1Q9NRU3 951 aa15.9■□□□□ 0.14
LSM5-201ENST00000223084 KLRK1P26718 216 aa15.89■□□□□ 0.13
LSM5-201ENST00000223084 TXNRD3Q86VQ6 643 aa15.89■□□□□ 0.13
LSM5-201ENST00000223084 C16orf71Q8IYS4 520 aaPredicted RBP15.89■□□□□ 0.13
LSM5-201ENST00000223084 LEMD3Q9Y2U8 911 aa15.89■□□□□ 0.13
LSM5-201ENST00000223084 ZNF804BA4D1E1 1349 aa15.89■□□□□ 0.13
LSM5-201ENST00000223084 G3V3G9 751 aa15.88■□□□□ 0.13
LSM5-201ENST00000223084 GNAI3P08754 354 aa15.88■□□□□ 0.13
LSM5-201ENST00000223084 KCNJ4P48050 445 aa15.88■□□□□ 0.13
LSM5-201ENST00000223084 RFX5P48382 616 aaPredicted RBP15.88■□□□□ 0.13
LSM5-201ENST00000223084 LRRC24Q50LG9 513 aa15.88■□□□□ 0.13
LSM5-201ENST00000223084 DCAF8Q5TAQ9 597 aa15.88■□□□□ 0.13
LSM5-201ENST00000223084 CIAPIN1Q6FI81 312 aa15.88■□□□□ 0.13
LSM5-201ENST00000223084 PANK1Q8TE04 598 aa15.88■□□□□ 0.13
LSM5-201ENST00000223084 A0A1B0GUL6 1792 aa15.87■□□□□ 0.13
LSM5-201ENST00000223084 SCN9AQ15858 1988 aa15.87■□□□□ 0.13
LSM5-201ENST00000223084 TOMM70O94826 608 aa15.87■□□□□ 0.13
LSM5-201ENST00000223084 ITPRIPQ8IWB1 547 aa15.87■□□□□ 0.13
LSM5-201ENST00000223084 HACL1Q9UJ83 578 aa15.87■□□□□ 0.13
LSM5-201ENST00000223084 RIPOR2Q9Y4F9 1068 aa15.87■□□□□ 0.13
LSM5-201ENST00000223084 MED23Q9ULK4 1368 aa15.87■□□□□ 0.13
LSM5-201ENST00000223084 PSMD14O00487 310 aa15.86■□□□□ 0.13
LSM5-201ENST00000223084 POTEIP0CG38 1075 aa15.86■□□□□ 0.13
LSM5-201ENST00000223084 POTEJP0CG39 1038 aa15.86■□□□□ 0.13
LSM5-201ENST00000223084 EPS15P42566 896 aa15.86■□□□□ 0.13
LSM5-201ENST00000223084 GMPSP49915 693 aaPredicted RBP15.86■□□□□ 0.13
LSM5-201ENST00000223084 SCNN1DP51172 638 aa15.86■□□□□ 0.13
LSM5-201ENST00000223084 TNIP1Q15025 636 aa15.86■□□□□ 0.13
LSM5-201ENST00000223084 TAF1DQ9H5J8 278 aaPredicted RBP15.86■□□□□ 0.13
LSM5-201ENST00000223084 HDAC5Q9UQL6 1122 aa15.86■□□□□ 0.13
LSM5-201ENST00000223084 SCN4AP35499 1836 aa15.86■□□□□ 0.13
LSM5-201ENST00000223084 IQCA1LA6NCM1 817 aa15.85■□□□□ 0.13
LSM5-201ENST00000223084 NPM3O75607 178 aaKnown RBP15.85■□□□□ 0.13
LSM5-201ENST00000223084 PTPN12Q05209 780 aaKnown RBP15.85■□□□□ 0.13
LSM5-201ENST00000223084 RBM46Q8TBY0 533 aaKnown RBP15.85■□□□□ 0.13
LSM5-201ENST00000223084 ZBTB12Q9Y330 459 aaPredicted RBP15.85■□□□□ 0.13
LSM5-201ENST00000223084 SHTN1A0MZ66 631 aa15.84■□□□□ 0.13
LSM5-201ENST00000223084 GNAI2P04899 355 aa15.84■□□□□ 0.13
LSM5-201ENST00000223084 LMOD1P29536 600 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms